RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 SPANXCQ9NY87 97 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 IGKV2D-24A0A075B6R9 120 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 A0A1B0GV90 55 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 TAX1BP3O14907 124 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 HERV-K104P63124 156 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 C6orf226Q5I0X4 101 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 LINC00526Q96FQ7 95 aa11.72□□□□□ -0.53
PHGDH-232ENST00000641947 SMIM13P0DJ93 91 aa11.71□□□□□ -0.54
PHGDH-232ENST00000641947 PTTG1IPP53801 180 aa11.71□□□□□ -0.54
PHGDH-232ENST00000641947 MUSTN1Q8IVN3 82 aa11.71□□□□□ -0.54
PHGDH-232ENST00000641947 UBE2DNLQ8IWF7 75 aa11.71□□□□□ -0.54
PHGDH-232ENST00000641947 C6orf223Q8N319 242 aa11.71□□□□□ -0.54
PHGDH-232ENST00000641947 C1orf43Q9BWL3 253 aa11.71□□□□□ -0.54
PHGDH-232ENST00000641947 PRSS2P07478 247 aa11.7□□□□□ -0.54
PHGDH-232ENST00000641947 NPC2P61916 151 aa11.7□□□□□ -0.54
PHGDH-232ENST00000641947 NHP2Q9NX24 153 aaKnown RBP11.7□□□□□ -0.54
PHGDH-232ENST00000641947 MEIG1Q5JSS6 88 aa11.69□□□□□ -0.54
PHGDH-232ENST00000641947 KMT2AQ03164 3969 aa11.69□□□□□ -0.54
PHGDH-232ENST00000641947 A6NDN8 102 aa11.69□□□□□ -0.54
PHGDH-232ENST00000641947 SPAG11BQ08648 103 aa11.69□□□□□ -0.54
PHGDH-232ENST00000641947 C15orf56Q8N910 161 aa11.69□□□□□ -0.54
PHGDH-232ENST00000641947 CASC10Q5T4H9 136 aa11.68□□□□□ -0.54
PHGDH-232ENST00000641947 APOMO95445 188 aa11.67□□□□□ -0.54
PHGDH-232ENST00000641947 SOSTDC1Q6X4U4 206 aa11.67□□□□□ -0.54
PHGDH-232ENST00000641947 A0A1B0GWB2 263 aa11.67□□□□□ -0.54
PHGDH-232ENST00000641947 C10orf25Q5T742 122 aa11.67□□□□□ -0.54
PHGDH-232ENST00000641947 CFAP161Q6P656 301 aa11.67□□□□□ -0.54
PHGDH-232ENST00000641947 A4D1N5 150 aa11.66□□□□□ -0.54
PHGDH-232ENST00000641947 HIGD2BQ4VC39 106 aa11.66□□□□□ -0.54
PHGDH-232ENST00000641947 RAB37Q96AX2 223 aa11.66□□□□□ -0.54
PHGDH-232ENST00000641947 CKS1BP61024 79 aa11.65□□□□□ -0.54
PHGDH-232ENST00000641947 CIRBPQ14011 172 aaKnown RBP11.65□□□□□ -0.54
PHGDH-232ENST00000641947 UNQ6190/PRO20217Q6UXQ8 127 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 LINC00308Q8TCZ7 52 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 ERG28Q9UKR5 140 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 DNAH6Q9C0G6 4158 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 CFC1BP0CG36 223 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 CFC1P0CG37 223 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 PFN2P35080 140 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 CXCL5P42830 114 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-232ENST00000641947 SFTA2Q6UW10 78 aa11.64□□□□□ -0.55
PHGDH-232ENST00000641947 NTN5Q8WTR8 489 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-232ENST00000641947 MIR7-3HGQ8N6C7 128 aa11.63□□□□□ -0.55
PHGDH-232ENST00000641947 MUC7Q8TAX7 377 aa11.63□□□□□ -0.55
PHGDH-232ENST00000641947 NAA38Q9BRA0 125 aaKnown RBP11.63□□□□□ -0.55
PHGDH-232ENST00000641947 COX11Q9Y6N1 276 aa11.63□□□□□ -0.55
PHGDH-232ENST00000641947 DNAH2Q9P225 4427 aa11.62□□□□□ -0.55
PHGDH-232ENST00000641947 TMEM238LA0A1B0GVL6 79 aa11.62□□□□□ -0.55
PHGDH-232ENST00000641947 A6NJY4 79 aa11.62□□□□□ -0.55
PHGDH-232ENST00000641947 LINC00158P58513 81 aa11.62□□□□□ -0.55
PHGDH-232ENST00000641947 RPL24P83731 157 aaKnown RBP11.62□□□□□ -0.55
PHGDH-232ENST00000641947 IFITM1P13164 125 aa11.61□□□□□ -0.55
PHGDH-232ENST00000641947 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
PHGDH-232ENST00000641947 GVQW2A0A096LPI5 108 aaPredicted RBP11.59□□□□□ -0.55
PHGDH-232ENST00000641947 C6orf48Q9UBA6 75 aa11.59□□□□□ -0.55
PHGDH-232ENST00000641947 C9orf118A6NHY6 69 aa11.58□□□□□ -0.56
PHGDH-232ENST00000641947 ZNF561-AS1K7EIQ3 104 aa11.58□□□□□ -0.56
PHGDH-232ENST00000641947 RMI2Q96E14 147 aa11.58□□□□□ -0.56
PHGDH-232ENST00000641947 NBDYA0A0U1RRE5 68 aa11.57□□□□□ -0.56
PHGDH-232ENST00000641947 WWC2-AS2Q96NR7 200 aa11.57□□□□□ -0.56
PHGDH-232ENST00000641947 USP17L23D6RBM5 183 aa11.56□□□□□ -0.56
PHGDH-232ENST00000641947 H3BUT2 72 aa11.56□□□□□ -0.56
PHGDH-232ENST00000641947 Q6ZRU5 148 aa11.56□□□□□ -0.56
PHGDH-232ENST00000641947 A0A0B4J2C4 111 aa11.56□□□□□ -0.56
PHGDH-232ENST00000641947 LECT2O14960 151 aa11.56□□□□□ -0.56
PHGDH-232ENST00000641947 WFDC2Q14508 124 aa11.56□□□□□ -0.56
PHGDH-232ENST00000641947 C2orf48Q96LS8 159 aa11.55□□□□□ -0.56
PHGDH-232ENST00000641947 CAMK2N2Q96S95 79 aa11.55□□□□□ -0.56
PHGDH-232ENST00000641947 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-232ENST00000641947 TSPAN13O95857 204 aa11.54□□□□□ -0.56
PHGDH-232ENST00000641947 COX17Q14061 63 aa11.54□□□□□ -0.56
PHGDH-232ENST00000641947 PPDPFQ9H3Y8 114 aa11.54□□□□□ -0.56
PHGDH-232ENST00000641947 PGPEP1Q9NXJ5 209 aa11.54□□□□□ -0.56
PHGDH-232ENST00000641947 SLPIP03973 132 aa11.54□□□□□ -0.56
PHGDH-232ENST00000641947 PRO1854Q9UHT4 67 aa11.53□□□□□ -0.56
PHGDH-232ENST00000641947 HYDINQ4G0P3 5121 aa11.52□□□□□ -0.57
PHGDH-232ENST00000641947 TTC32Q5I0X7 151 aa11.51□□□□□ -0.57
PHGDH-232ENST00000641947 SND1-IT1Q9HBX3 110 aa11.51□□□□□ -0.57
PHGDH-232ENST00000641947 TRBV30A0A0K0K1B3 111 aa11.51□□□□□ -0.57
PHGDH-232ENST00000641947 M0R2N4 97 aa11.51□□□□□ -0.57
PHGDH-232ENST00000641947 Q8NDZ9 215 aa11.51□□□□□ -0.57
PHGDH-232ENST00000641947 COPS9Q8WXC6 57 aa11.51□□□□□ -0.57
PHGDH-232ENST00000641947 FRAS1Q86XX4 4008 aa11.51□□□□□ -0.57
PHGDH-232ENST00000641947 IGKV2-28A0A075B6P5 120 aa11.5□□□□□ -0.57
PHGDH-232ENST00000641947 A0A1W2PPM0 123 aa11.5□□□□□ -0.57
PHGDH-232ENST00000641947 IGKV2D-28P01615 120 aa11.5□□□□□ -0.57
PHGDH-232ENST00000641947 Q6ZRN7 208 aaPredicted RBP11.5□□□□□ -0.57
PHGDH-232ENST00000641947 HECTD4Q9Y4D8 3996 aa11.5□□□□□ -0.57
PHGDH-232ENST00000641947 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
PHGDH-232ENST00000641947 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
PHGDH-232ENST00000641947 H7C2G1 150 aa11.49□□□□□ -0.57
PHGDH-232ENST00000641947 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
PHGDH-232ENST00000641947 F8WDY8 70 aa11.47□□□□□ -0.57
PHGDH-232ENST00000641947 VAMP3Q15836 100 aa11.47□□□□□ -0.57
PHGDH-232ENST00000641947 LINC00337Q8N6G1 96 aa11.47□□□□□ -0.57
PHGDH-232ENST00000641947 PSCAO43653 123 aa11.46□□□□□ -0.57
PHGDH-232ENST00000641947 RPL13AP40429 203 aaKnown RBP11.46□□□□□ -0.57
PHGDH-232ENST00000641947 DNAH17Q9UFH2 4485 aa11.46□□□□□ -0.58
PHGDH-232ENST00000641947 Q6ZR54 194 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms