RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PYY3Q5JQD4 70 aa6.2□□□□□ -1.42
PHGDH-228ENST00000641847 Q6ZRN7 208 aaPredicted RBP6.2□□□□□ -1.42
PHGDH-228ENST00000641847 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
PHGDH-228ENST00000641847 IGHV3-64A0A075B6Q5 118 aa6.19□□□□□ -1.42
PHGDH-228ENST00000641847 hDV102S1A0JD36 115 aa6.19□□□□□ -1.42
PHGDH-228ENST00000641847 SMIM1B2RUZ4 78 aa6.19□□□□□ -1.42
PHGDH-228ENST00000641847 SMR3BP02814 79 aaPredicted RBP6.19□□□□□ -1.42
PHGDH-228ENST00000641847 HERVK_113P61574 105 aa6.19□□□□□ -1.42
PHGDH-228ENST00000641847 LINC01561Q8N1V8 128 aa6.19□□□□□ -1.42
PHGDH-228ENST00000641847 IGHV1-58A0A0C4DH39 117 aa6.18□□□□□ -1.42
PHGDH-228ENST00000641847 LECT2O14960 151 aa6.18□□□□□ -1.42
PHGDH-228ENST00000641847 APOMO95445 188 aa6.18□□□□□ -1.42
PHGDH-228ENST00000641847 MAJINQ3KP22 176 aa6.18□□□□□ -1.42
PHGDH-228ENST00000641847 STPG4Q8N801 248 aa6.18□□□□□ -1.42
PHGDH-228ENST00000641847 C15orf56Q8N910 161 aa6.18□□□□□ -1.42
PHGDH-228ENST00000641847 ORAOV1Q8WV07 137 aa6.18□□□□□ -1.42
PHGDH-228ENST00000641847 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 IGLV5-39A0A0G2JS06 123 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 KRTAP29-1A8MX34 341 aaPredicted RBP6.17□□□□□ -1.42
PHGDH-228ENST00000641847 HSBP1L1C9JCN9 74 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 USP17L23D6RBM5 183 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 SPAG11BQ08648 103 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 WFDC2Q14508 124 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 HIGD2BQ4VC39 106 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 ANKRD39Q53RE8 183 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 TOMM7Q9P0U1 55 aa6.17□□□□□ -1.42
PHGDH-228ENST00000641847 GVQW2A0A096LPI5 108 aaPredicted RBP6.16□□□□□ -1.42
PHGDH-228ENST00000641847 E9PLD3 99 aa6.16□□□□□ -1.42
PHGDH-228ENST00000641847 SMIM6P0DI80 62 aa6.16□□□□□ -1.42
PHGDH-228ENST00000641847 CFAP161Q6P656 301 aa6.16□□□□□ -1.42
PHGDH-228ENST00000641847 LRCOL1A6NCL2 159 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 LEPROTO15243 131 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 PLA2G1BP04054 148 aaKnown RBP6.15□□□□□ -1.42
PHGDH-228ENST00000641847 PRSS2P07478 247 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 TSPEAR-AS2P59090 65 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 Q8IZM0 81 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 COX7B2Q8TF08 81 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 PLEKHB2Q96CS7 222 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 LINC00526Q96FQ7 95 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 VAMP8Q9BV40 100 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.42
PHGDH-228ENST00000641847 A0A087WTM6 91 aa6.14□□□□□ -1.43
PHGDH-228ENST00000641847 IGKV2D-26A0A0A0MRZ7 120 aa6.14□□□□□ -1.43
PHGDH-228ENST00000641847 ZNF561-AS1K7EIQ3 104 aa6.14□□□□□ -1.43
PHGDH-228ENST00000641847 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
PHGDH-228ENST00000641847 NMUP48645 174 aa6.14□□□□□ -1.43
PHGDH-228ENST00000641847 KIAA0087Q14695 138 aa6.14□□□□□ -1.43
PHGDH-228ENST00000641847 C14orf177Q52M58 125 aa6.14□□□□□ -1.43
PHGDH-228ENST00000641847 J3QQQ9 107 aa6.13□□□□□ -1.43
PHGDH-228ENST00000641847 GCSHP23434 173 aa6.13□□□□□ -1.43
PHGDH-228ENST00000641847 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
PHGDH-228ENST00000641847 SPATA45Q537H7 98 aa6.13□□□□□ -1.43
PHGDH-228ENST00000641847 Q8N814 137 aa6.13□□□□□ -1.43
PHGDH-228ENST00000641847 FUSP35637 526 aaKnown RBP eCLIP6.12□□□□□ -1.43
PHGDH-228ENST00000641847 CKS1BP61024 79 aa6.12□□□□□ -1.43
PHGDH-228ENST00000641847 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
PHGDH-228ENST00000641847 NTN5Q8WTR8 489 aaPredicted RBP6.12□□□□□ -1.43
PHGDH-228ENST00000641847 C2orf48Q96LS8 159 aa6.12□□□□□ -1.43
PHGDH-228ENST00000641847 CAMK2N2Q96S95 79 aa6.12□□□□□ -1.43
PHGDH-228ENST00000641847 TTTY13Q9BZ97 58 aa6.12□□□□□ -1.43
PHGDH-228ENST00000641847 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.11□□□□□ -1.43
PHGDH-228ENST00000641847 NDUFA1O15239 70 aa6.11□□□□□ -1.43
PHGDH-228ENST00000641847 EIF4EBP3O60516 100 aaPredicted RBP6.11□□□□□ -1.43
PHGDH-228ENST00000641847 CXCL5P42830 114 aa6.11□□□□□ -1.43
PHGDH-228ENST00000641847 S100A12P80511 92 aa6.11□□□□□ -1.43
PHGDH-228ENST00000641847 C2orf82Q6UX34 121 aa6.11□□□□□ -1.43
PHGDH-228ENST00000641847 PCP2Q8IVA1 136 aa6.11□□□□□ -1.43
PHGDH-228ENST00000641847 NDUFA12Q9UI09 145 aa6.11□□□□□ -1.43
PHGDH-228ENST00000641847 ZNF815PA8K554 130 aa6.1□□□□□ -1.43
PHGDH-228ENST00000641847 SFTA2Q6UW10 78 aa6.1□□□□□ -1.43
PHGDH-228ENST00000641847 ZNF625Q96I27 306 aaPredicted RBP6.1□□□□□ -1.43
PHGDH-228ENST00000641847 CARD19Q96LW7 228 aa6.1□□□□□ -1.43
PHGDH-228ENST00000641847 C12orf57Q99622 126 aa6.1□□□□□ -1.43
PHGDH-228ENST00000641847 MYMXA0A1B0GTQ4 84 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 F8WDY8 70 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 SLPIP03973 132 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 COX8AP10176 69 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 SYCNQ0VAF6 134 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 C10orf25Q5T742 122 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 UNQ6190/PRO20217Q6UXQ8 127 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 Q6ZRU5 148 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 C6orf48Q9UBA6 75 aa6.09□□□□□ -1.43
PHGDH-228ENST00000641847 LRP1Q07954 4544 aaKnown RBP6.09□□□□□ -1.44
PHGDH-228ENST00000641847 TRBV30A0A0K0K1B3 111 aa6.08□□□□□ -1.44
PHGDH-228ENST00000641847 OXTP01178 125 aa6.08□□□□□ -1.44
PHGDH-228ENST00000641847 CNBPP62633 177 aaKnown RBP6.08□□□□□ -1.44
PHGDH-228ENST00000641847 HERV-K104P63124 156 aa6.08□□□□□ -1.44
PHGDH-228ENST00000641847 LINC00518Q8N0U6 118 aa6.08□□□□□ -1.44
PHGDH-228ENST00000641847 C14orf144Q96I85 54 aa6.08□□□□□ -1.44
PHGDH-228ENST00000641847 TP73-AS1Q9UF72 201 aa6.08□□□□□ -1.44
PHGDH-228ENST00000641847 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
PHGDH-228ENST00000641847 IGLV5-52A0A0A0MRZ9 124 aa6.07□□□□□ -1.44
PHGDH-228ENST00000641847 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.07□□□□□ -1.44
PHGDH-228ENST00000641847 HAMPP81172 84 aa6.07□□□□□ -1.44
PHGDH-228ENST00000641847 MEIG1Q5JSS6 88 aa6.07□□□□□ -1.44
PHGDH-228ENST00000641847 BOD1L2Q8IYS8 172 aa6.07□□□□□ -1.44
PHGDH-228ENST00000641847 ERG28Q9UKR5 140 aa6.07□□□□□ -1.44
PHGDH-228ENST00000641847 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
PHGDH-228ENST00000641847 RNF151Q2KHN1 245 aa6.06□□□□□ -1.44
PHGDH-228ENST00000641847 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 220.9 ms