RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 IGHV3OR16-9A0A0B4J2B5 98 aa4.77□□□□□ -1.65
PHGDH-225ENST00000641720 LINC01549A6NIU2 74 aa4.77□□□□□ -1.65
PHGDH-225ENST00000641720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.77□□□□□ -1.65
PHGDH-225ENST00000641720 VPREB1P12018 145 aa4.77□□□□□ -1.65
PHGDH-225ENST00000641720 PMVKQ15126 192 aa4.77□□□□□ -1.65
PHGDH-225ENST00000641720 LINC01620Q4KN68 170 aa4.77□□□□□ -1.65
PHGDH-225ENST00000641720 PAPPA-AS1Q5QFB9 102 aa4.77□□□□□ -1.65
PHGDH-225ENST00000641720 FAM19A3Q7Z5A8 133 aa4.77□□□□□ -1.65
PHGDH-225ENST00000641720 MUC2Q02817 5179 aa4.76□□□□□ -1.65
PHGDH-225ENST00000641720 IGLV4-69A0A075B6H9 119 aa4.76□□□□□ -1.65
PHGDH-225ENST00000641720 hDV102S1A0JD36 115 aa4.76□□□□□ -1.65
PHGDH-225ENST00000641720 ATP5LO75964 103 aa4.76□□□□□ -1.65
PHGDH-225ENST00000641720 SLPIP03973 132 aa4.76□□□□□ -1.65
PHGDH-225ENST00000641720 COA6Q5JTJ3 125 aaKnown RBP4.76□□□□□ -1.65
PHGDH-225ENST00000641720 LINC00526Q96FQ7 95 aa4.76□□□□□ -1.65
PHGDH-225ENST00000641720 IGLV5-45A0A087WSX0 123 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 A0A087WZ39 114 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 IGHV1-58A0A0C4DH39 117 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 LOC105371267A0A1B0GV96 52 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 NDUFA6P56556 154 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 C14orf177Q52M58 125 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 IFI27L1Q96BM0 104 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 CHAC1Q9BUX1 264 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 CDKN2A-AS1Q9UH64 79 aa4.75□□□□□ -1.65
PHGDH-225ENST00000641720 TINCRA0A1B0GVN0 87 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 C11orf86A6NJI1 115 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 LEPROTL1O95214 131 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 IGLC3P0DOY3 106 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 FABP4P15090 132 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 SEC61GP60059 68 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 CNBPP62633 177 aaKnown RBP4.74□□□□□ -1.65
PHGDH-225ENST00000641720 SPAG11BQ08648 103 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 CIRBP-AS1Q8TBR5 109 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 ORAOV1Q8WV07 137 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
PHGDH-225ENST00000641720 IGHV3-64A0A075B6Q5 118 aa4.73□□□□□ -1.65
PHGDH-225ENST00000641720 TRAV12-1A0A0B4J245 112 aa4.73□□□□□ -1.65
PHGDH-225ENST00000641720 SMIM1B2RUZ4 78 aa4.73□□□□□ -1.65
PHGDH-225ENST00000641720 ZNF22P17026 224 aaPredicted RBP4.73□□□□□ -1.65
PHGDH-225ENST00000641720 HERVK_113P63121 156 aa4.73□□□□□ -1.65
PHGDH-225ENST00000641720 S100A12P80511 92 aa4.73□□□□□ -1.65
PHGDH-225ENST00000641720 MRPL35Q9NZE8 188 aaKnown RBP4.73□□□□□ -1.65
PHGDH-225ENST00000641720 SPINK8P0C7L1 97 aa4.72□□□□□ -1.65
PHGDH-225ENST00000641720 SEC11AP67812 179 aa4.72□□□□□ -1.65
PHGDH-225ENST00000641720 KIAA0087Q14695 138 aa4.72□□□□□ -1.65
PHGDH-225ENST00000641720 Q6ZRU5 148 aa4.72□□□□□ -1.65
PHGDH-225ENST00000641720 OR10D4PQ8NGN7 298 aa4.72□□□□□ -1.65
PHGDH-225ENST00000641720 PMCHL2Q9BQD1 86 aa4.72□□□□□ -1.65
PHGDH-225ENST00000641720 HSPB8Q9UJY1 196 aa4.72□□□□□ -1.65
PHGDH-225ENST00000641720 F8VRH5 84 aa4.71□□□□□ -1.66
PHGDH-225ENST00000641720 APOMO95445 188 aa4.71□□□□□ -1.66
PHGDH-225ENST00000641720 C10orf25Q5T742 122 aa4.71□□□□□ -1.66
PHGDH-225ENST00000641720 LINC01561Q8N1V8 128 aa4.71□□□□□ -1.66
PHGDH-225ENST00000641720 HIST3H2BBQ8N257 126 aa4.71□□□□□ -1.66
PHGDH-225ENST00000641720 CARD19Q96LW7 228 aa4.71□□□□□ -1.66
PHGDH-225ENST00000641720 PACRGQ96M98 296 aaPredicted RBP4.71□□□□□ -1.66
PHGDH-225ENST00000641720 IGLV5-39A0A0G2JS06 123 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 SYS1-DBNDD2H3BUS1 97 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 PANO1I0J062 215 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 SYCNQ0VAF6 134 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 C2orf82Q6UX34 121 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 C9orf163Q8N9P6 203 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 C2orf48Q96LS8 159 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 CAMK2N2Q96S95 79 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 TOMM7Q9P0U1 55 aa4.7□□□□□ -1.66
PHGDH-225ENST00000641720 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.69□□□□□ -1.66
PHGDH-225ENST00000641720 H3BRM9 83 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 C3orf79P0CE67 100 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 CHTF8P0CG12 524 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 TMEM170BQ5T4T1 132 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 UNQ6190/PRO20217Q6UXQ8 127 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 SDIM1Q6ZPB5 146 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 COX7B2Q8TF08 81 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 HIST1H2BLQ99880 126 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 MAP1LC3CQ9BXW4 147 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 C6orf48Q9UBA6 75 aa4.69□□□□□ -1.66
PHGDH-225ENST00000641720 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.69□□□□□ -1.66
PHGDH-225ENST00000641720 TMEM223A0PJW6 202 aa4.68□□□□□ -1.66
PHGDH-225ENST00000641720 NDUFA1O15239 70 aa4.68□□□□□ -1.66
PHGDH-225ENST00000641720 DPM2O94777 84 aa4.68□□□□□ -1.66
PHGDH-225ENST00000641720 PLNP26678 52 aa4.68□□□□□ -1.66
PHGDH-225ENST00000641720 KRTDAPP60985 99 aa4.68□□□□□ -1.66
PHGDH-225ENST00000641720 SNRPEP62304 92 aaKnown RBP4.68□□□□□ -1.66
PHGDH-225ENST00000641720 LINC01545Q5VT33 79 aa4.68□□□□□ -1.66
PHGDH-225ENST00000641720 Q8IZM0 81 aa4.68□□□□□ -1.66
PHGDH-225ENST00000641720 A0A096LNI7 61 aa4.67□□□□□ -1.66
PHGDH-225ENST00000641720 PRSS2P07478 247 aa4.67□□□□□ -1.66
PHGDH-225ENST00000641720 TSPEAR-AS2P59090 65 aa4.67□□□□□ -1.66
PHGDH-225ENST00000641720 C9orf116Q5BN46 136 aaPredicted RBP4.67□□□□□ -1.66
PHGDH-225ENST00000641720 IGKV2-24A0A0C4DH68 120 aa4.66□□□□□ -1.66
PHGDH-225ENST00000641720 KRTAP9-6A0A140TA67 174 aa4.66□□□□□ -1.66
PHGDH-225ENST00000641720 H3BS24 57 aa4.66□□□□□ -1.66
PHGDH-225ENST00000641720 IGKCP01834 107 aa4.66□□□□□ -1.66
PHGDH-225ENST00000641720 S100A2P29034 98 aa4.66□□□□□ -1.66
PHGDH-225ENST00000641720 CKS1BP61024 79 aa4.66□□□□□ -1.66
PHGDH-225ENST00000641720 RPL37AP61513 92 aaKnown RBP4.66□□□□□ -1.66
PHGDH-225ENST00000641720 CIRBPQ14011 172 aaKnown RBP4.66□□□□□ -1.66
PHGDH-225ENST00000641720 VAMP3Q15836 100 aa4.66□□□□□ -1.66
PHGDH-225ENST00000641720 C6orf226Q5I0X4 101 aa4.66□□□□□ -1.66
PHGDH-225ENST00000641720 SPACA4Q8TDM5 124 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 874.8 ms