RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	ZNF664	Q8N3J9	261 aa		4.05	□□□□□ -1.76
CASC19-238	ENST00000641523		Q8N976	141 aa		4.05	□□□□□ -1.76
CASC19-238	ENST00000641523	SPANXC	Q9NY87	97 aa		4.05	□□□□□ -1.76
CASC19-238	ENST00000641523	FAT1	Q14517	4588 aa		4.05	□□□□□ -1.76
CASC19-238	ENST00000641523	CRP	P02741	224 aa		4.04	□□□□□ -1.76
CASC19-238	ENST00000641523	INAFM2	P0DMQ5	153 aa		4.04	□□□□□ -1.76
CASC19-238	ENST00000641523	UBE2D3	P61077	147 aa		4.04	□□□□□ -1.76
CASC19-238	ENST00000641523	UBE2D2	P62837	147 aa		4.04	□□□□□ -1.76
CASC19-238	ENST00000641523	ZNF56	Q15929	161 aa		4.04	□□□□□ -1.76
CASC19-238	ENST00000641523	C14orf178	Q8N769	122 aa	Predicted RBP	4.04	□□□□□ -1.76
CASC19-238	ENST00000641523	AP1S3	Q96PC3	154 aa		4.04	□□□□□ -1.76
CASC19-238	ENST00000641523	RPS10P5	Q9NQ39	176 aa		4.04	□□□□□ -1.76
CASC19-238	ENST00000641523	TRAV1-1	A0A0B4J248	108 aa		4.03	□□□□□ -1.76
CASC19-238	ENST00000641523		A0A1B0GX51	115 aa		4.03	□□□□□ -1.76
CASC19-238	ENST00000641523		A8MUN3	132 aa		4.03	□□□□□ -1.76
CASC19-238	ENST00000641523		C9JQL5	133 aa		4.03	□□□□□ -1.76
CASC19-238	ENST00000641523	LST1	O00453	97 aa		4.03	□□□□□ -1.76
CASC19-238	ENST00000641523	CAMK2N1	Q7Z7J9	78 aa		4.03	□□□□□ -1.76
CASC19-238	ENST00000641523	CAMK2N2	Q96S95	79 aa		4.03	□□□□□ -1.76
CASC19-238	ENST00000641523	MYCBP2	O75592	4640 aa		4.03	□□□□□ -1.76
CASC19-238	ENST00000641523	IGKV2D-24	A0A075B6R9	120 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	TRBV6-8	A0A0A6YYG3	113 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	TMEM262	E9PQX1	116 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	FUS	P35637	526 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	RPL35	P42766	123 aa	Known RBP	4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	NMU	P48645	174 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	DSCR10	P59022	87 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	OR10AG1	Q8NH19	301 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	UBE2W	Q96B02	151 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	GNG13	Q9P2W3	67 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	KLK12	Q9UKR0	248 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523		F2Z2F3	143 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	COX7A2L	O14548	114 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	GNG4	P50150	75 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	MIA	Q16674	131 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	HRCT1	Q6UXD1	115 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523		Q6ZSA8	131 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	C8orf17	Q9NRJ1	99 aa		4.02	□□□□□ -1.77
CASC19-238	ENST00000641523	TRBV25-1	A0A075B6N4	114 aa		4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	PHOX2A	O14813	284 aa		4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	LECT2	O14960	151 aa		4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	TRGC1	P0CF51	173 aa		4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	CCL20	P78556	96 aa		4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	MEF2B	Q02080	365 aa	Predicted RBP	4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	CEND1	Q8N111	149 aa		4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	FER1L6-AS1	Q8NA97	138 aa		4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	CARD19	Q96LW7	228 aa		4.01	□□□□□ -1.77
CASC19-238	ENST00000641523	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4	□□□□□ -1.77
CASC19-238	ENST00000641523	SMR3B	P02814	79 aa	Predicted RBP	4	□□□□□ -1.77
CASC19-238	ENST00000641523	ANG	P03950	147 aa	Known RBP	4	□□□□□ -1.77
CASC19-238	ENST00000641523	ZNF25	P17030	456 aa	Predicted RBP	4	□□□□□ -1.77
CASC19-238	ENST00000641523	LCE1F	Q5T754	118 aa		4	□□□□□ -1.77
CASC19-238	ENST00000641523		Q6Q795	121 aa		4	□□□□□ -1.77
CASC19-238	ENST00000641523	VPS13B	Q7Z7G8	4022 aa		4	□□□□□ -1.77
CASC19-238	ENST00000641523	IGHV1-24	A0A0C4DH33	117 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	MGP	P08493	103 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	IGLC6	P0CF74	106 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	BCL2	P10415	239 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	WFDC2	Q14508	124 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	IQCJ	Q1A5X6	159 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	TCTE3	Q8IZS6	198 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	OR5A1	Q8NGJ0	315 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	DERL1	Q9BUN8	251 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	MED9	Q9NWA0	146 aa		3.99	□□□□□ -1.77
CASC19-238	ENST00000641523	TRBV20OR9-2	A0A075B6H5	130 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	MUC21	A0A0G2JKD1	596 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	MUC21	A0A140T8X8	626 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	FAM168B	A1KXE4	195 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	C19orf71	A6NCJ1	209 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523		C9JAW5	83 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	UBE2A	P49459	152 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	RASL11A	Q6T310	242 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	ORMDL3	Q8N138	153 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	DEFB104A	Q8WTQ1	72 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	DPH3P1	Q9H4G8	78 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523	PRR34	Q9NV39	138 aa		3.98	□□□□□ -1.77
CASC19-238	ENST00000641523		M0QY20	66 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	HLA-DQA1	P01909	254 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	GZMB	P10144	247 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	HAMP	P81172	84 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	RNASE13	Q5GAN3	156 aa	Known RBP	3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	TEX261	Q6UWH6	196 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	ENHO	Q6UWT2	76 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	C9orf62	Q8N4C0	152 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	NUP35	Q8NFH5	326 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	KIF25-AS1	Q9Y6Z4	181 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	IGLV1-50	A0A075B6I6	118 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	UBE2L6	O14933	153 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	SCX	Q7RTU7	201 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	LINC00269	Q8N2A0	174 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	OR10D4P	Q8NGN7	298 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	C14orf144	Q96I85	54 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	CNFN	Q9BYD5	112 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	RPP21	Q9H633	154 aa	Known RBP	3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	NIT2	Q9NQR4	276 aa		3.97	□□□□□ -1.77
CASC19-238	ENST00000641523	DNAH8	Q96JB1	4490 aa		3.96	□□□□□ -1.78
CASC19-238	ENST00000641523	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	3.96	□□□□□ -1.78
CASC19-238	ENST00000641523	NCR2	O95944	276 aa		3.96	□□□□□ -1.78
CASC19-238	ENST00000641523	SMIM6	P0DI80	62 aa		3.96	□□□□□ -1.78
CASC19-238	ENST00000641523	LYZL1	Q6UWQ5	148 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms