RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 Q8N9W7 124 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 ZNRF2Q8NHG8 242 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 METTL26Q96S19 204 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 ICOSQ9Y6W8 199 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 MINOS1-NBL1R4GNA1 71 aa4.55□□□□□ -1.68
SCARB2-224ENST00000640880 CSMD1Q96PZ7 3565 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 TRBV7-1A0A0A6YYK4 115 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 CLPSL1A2RUU4 121 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 ODF3BA8MYP8 253 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 MGPP08493 103 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 PRB4P10163 310 aaPredicted RBP4.54□□□□□ -1.68
SCARB2-224ENST00000640880 ZNF22P17026 224 aaPredicted RBP4.54□□□□□ -1.68
SCARB2-224ENST00000640880 SYNJ2BPP57105 145 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 C9orf153Q5TBE3 101 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 CEMP1Q6PRD7 247 aaPredicted RBP4.54□□□□□ -1.68
SCARB2-224ENST00000640880 TMEM86BQ8N661 226 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 RNF182Q8N6D2 247 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 ZFAND2AQ8N6M9 145 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 FAM19A4Q96LR4 140 aa4.54□□□□□ -1.68
SCARB2-224ENST00000640880 HIVEP1P15822 2718 aa4.53□□□□□ -1.68
SCARB2-224ENST00000640880 NAV3Q8IVL0 2385 aa4.53□□□□□ -1.68
SCARB2-224ENST00000640880 H3BUX3 64 aa4.53□□□□□ -1.68
SCARB2-224ENST00000640880 CRYGAP11844 174 aa4.53□□□□□ -1.68
SCARB2-224ENST00000640880 RNASE4P34096 147 aaKnown RBP4.53□□□□□ -1.68
SCARB2-224ENST00000640880 LINC00315P59091 139 aa4.53□□□□□ -1.68
SCARB2-224ENST00000640880 OR13C6PQ8NH95 151 aa4.53□□□□□ -1.68
SCARB2-224ENST00000640880 S4R3C0 116 aa4.53□□□□□ -1.68
SCARB2-224ENST00000640880 TLN2Q9Y4G6 2542 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 CELSR1Q9NYQ6 3014 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 FAM236AA0A1B0GUQ0 79 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 FAM236BA0A1B0GV22 79 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 H7C2G1 150 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 NDPQ00604 133 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 RBMY1FQ15415 496 aaKnown RBP4.52□□□□□ -1.69
SCARB2-224ENST00000640880 LY6EQ16553 131 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 MIAQ16674 131 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 PRR9Q5T870 116 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 C5orf38Q86SI9 138 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 DAND5Q8N907 189 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 COPS9Q8WXC6 57 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 AKAP9Q99996 3911 aa4.52□□□□□ -1.69
SCARB2-224ENST00000640880 SONP18583 2426 aaKnown RBP4.52□□□□□ -1.69
SCARB2-224ENST00000640880 FN1P02751 2386 aaKnown RBP4.51□□□□□ -1.69
SCARB2-224ENST00000640880 IGHV3-66A0A0C4DH42 116 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 SMIM9A6NGZ8 99 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 H0Y9J4 135 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 ATOX1O00244 68 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 LINC00694P0DN24 101 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 RNASE3P12724 160 aaKnown RBP4.51□□□□□ -1.69
SCARB2-224ENST00000640880 COX7CP15954 63 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 EMP1P54849 157 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 HERVK_113P63121 156 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 KRTAP21-3Q3LHN1 58 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 DCANP1Q8TF63 244 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 TIMM21Q9BVV7 248 aa4.51□□□□□ -1.69
SCARB2-224ENST00000640880 IGHV1-58A0A0C4DH39 117 aa4.5□□□□□ -1.69
SCARB2-224ENST00000640880 FAM223BA6NKX1 122 aa4.5□□□□□ -1.69
SCARB2-224ENST00000640880 I3L3M4 83 aa4.5□□□□□ -1.69
SCARB2-224ENST00000640880 TRACP01848 142 aa4.5□□□□□ -1.69
SCARB2-224ENST00000640880 INAFM2P0DMQ5 153 aa4.5□□□□□ -1.69
SCARB2-224ENST00000640880 IGHV3-30-3P0DP02 117 aa4.5□□□□□ -1.69
SCARB2-224ENST00000640880 HIST1H4AP62805 103 aaKnown RBP4.5□□□□□ -1.69
SCARB2-224ENST00000640880 RPL39P62891 51 aaKnown RBP4.5□□□□□ -1.69
SCARB2-224ENST00000640880 MRPS36P82909 103 aaKnown RBP4.5□□□□□ -1.69
SCARB2-224ENST00000640880 FAM222AQ5U5X8 452 aa4.5□□□□□ -1.69
SCARB2-224ENST00000640880 FAM223AQ8IWN6 122 aa4.5□□□□□ -1.69
SCARB2-224ENST00000640880 ZNF469Q96JG9 3925 aaPredicted RBP4.5□□□□□ -1.69
SCARB2-224ENST00000640880 C2CD3Q4AC94 2353 aa4.49□□□□□ -1.69
SCARB2-224ENST00000640880 MAP1AP78559 2803 aaPredicted RBP4.49□□□□□ -1.69
SCARB2-224ENST00000640880 KLLNB2CW77 178 aa4.49□□□□□ -1.69
SCARB2-224ENST00000640880 COX7A2LO14548 114 aa4.49□□□□□ -1.69
SCARB2-224ENST00000640880 TMEM258P61165 79 aa4.49□□□□□ -1.69
SCARB2-224ENST00000640880 CLEC19AQ6UXS0 136 aa4.49□□□□□ -1.69
SCARB2-224ENST00000640880 FAM19A1Q7Z5A9 133 aa4.49□□□□□ -1.69
SCARB2-224ENST00000640880 C3orf56Q8N813 242 aa4.49□□□□□ -1.69
SCARB2-224ENST00000640880 VPS13CQ709C8 3753 aa4.48□□□□□ -1.69
SCARB2-224ENST00000640880 NSD1Q96L73 2696 aaPredicted RBP4.48□□□□□ -1.69
SCARB2-224ENST00000640880 TINCRA0A1B0GVN0 87 aa4.48□□□□□ -1.69
SCARB2-224ENST00000640880 M0QY20 66 aa4.48□□□□□ -1.69
SCARB2-224ENST00000640880 GNRH2O43555 120 aa4.48□□□□□ -1.69
SCARB2-224ENST00000640880 ZNF861PO60384 105 aa4.48□□□□□ -1.69
SCARB2-224ENST00000640880 CIRBPQ14011 172 aaKnown RBP4.48□□□□□ -1.69
SCARB2-224ENST00000640880 FAM19A5Q7Z5A7 132 aaPredicted RBP4.48□□□□□ -1.69
SCARB2-224ENST00000640880 TMEM243Q9BU79 118 aa4.48□□□□□ -1.69
SCARB2-224ENST00000640880 NDUFA12Q9UI09 145 aa4.48□□□□□ -1.69
SCARB2-224ENST00000640880 LINC00527Q9UJ94 153 aa4.48□□□□□ -1.69
SCARB2-224ENST00000640880 TEP1Q99973 2627 aaKnown RBP4.48□□□□□ -1.69
SCARB2-224ENST00000640880 IGHV3OR16-8A0A075B7F1 116 aa4.47□□□□□ -1.69
SCARB2-224ENST00000640880 NDUFA4O00483 81 aa4.47□□□□□ -1.69
SCARB2-224ENST00000640880 CLEC2BQ92478 149 aa4.47□□□□□ -1.69
SCARB2-224ENST00000640880 ZANQ9Y493 2812 aa4.47□□□□□ -1.69
SCARB2-224ENST00000640880 TRAV8-3A0A0A6YYJ7 113 aa4.46□□□□□ -1.7
SCARB2-224ENST00000640880 NDUFC2-KCTD14E9PQ53 114 aa4.46□□□□□ -1.7
SCARB2-224ENST00000640880 H3BUA1 57 aa4.46□□□□□ -1.7
SCARB2-224ENST00000640880 NDUFA1O15239 70 aa4.46□□□□□ -1.7
SCARB2-224ENST00000640880 SMCR5Q8TEV8 140 aa4.46□□□□□ -1.7
SCARB2-224ENST00000640880 MTORP42345 2549 aa4.46□□□□□ -1.7
SCARB2-224ENST00000640880 TRBV12-3P01733 135 aa4.45□□□□□ -1.7
SCARB2-224ENST00000640880 CD28P10747 220 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms