RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 CTDSP1Q9GZU7 261 aa10.06□□□□□ -0.8
SMN2-216ENST00000638794 F8VRH5 84 aa10.05□□□□□ -0.8
SMN2-216ENST00000638794 NUPR1O60356 82 aa10.05□□□□□ -0.8
SMN2-216ENST00000638794 SEC11AP67812 179 aa10.05□□□□□ -0.8
SMN2-216ENST00000638794 PAPPA-AS1Q5QFB9 102 aa10.05□□□□□ -0.8
SMN2-216ENST00000638794 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
SMN2-216ENST00000638794 GEMIN7Q9H840 131 aaKnown RBP10.05□□□□□ -0.8
SMN2-216ENST00000638794 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
SMN2-216ENST00000638794 TOMM6Q96B49 74 aa10.04□□□□□ -0.8
SMN2-216ENST00000638794 CARHSP1Q9Y2V2 147 aaKnown RBP10.04□□□□□ -0.8
SMN2-216ENST00000638794 MUC2Q02817 5179 aa10.04□□□□□ -0.8
SMN2-216ENST00000638794 PRR4Q16378 134 aa10.03□□□□□ -0.8
SMN2-216ENST00000638794 G0S2P27469 103 aa10.02□□□□□ -0.81
SMN2-216ENST00000638794 KIAA1644Q3SXP7 199 aa10.02□□□□□ -0.81
SMN2-216ENST00000638794 MRPL55Q7Z7F7 128 aaKnown RBP10.02□□□□□ -0.81
SMN2-216ENST00000638794 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
SMN2-216ENST00000638794 SMIM1B2RUZ4 78 aa10.01□□□□□ -0.81
SMN2-216ENST00000638794 CXCL5P42830 114 aa10.01□□□□□ -0.81
SMN2-216ENST00000638794 RAB14P61106 215 aa10.01□□□□□ -0.81
SMN2-216ENST00000638794 ERASQ7Z444 233 aa10.01□□□□□ -0.81
SMN2-216ENST00000638794 SCGB3A1Q96QR1 104 aa10□□□□□ -0.81
SMN2-216ENST00000638794 BCE1O60756 84 aa9.99□□□□□ -0.81
SMN2-216ENST00000638794 ADCYAP1P18509 176 aa9.99□□□□□ -0.81
SMN2-216ENST00000638794 A0A087X002 238 aa9.98□□□□□ -0.81
SMN2-216ENST00000638794 TINCRA0A1B0GVN0 87 aa9.98□□□□□ -0.81
SMN2-216ENST00000638794 PDZD11Q5EBL8 140 aa9.98□□□□□ -0.81
SMN2-216ENST00000638794 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
SMN2-216ENST00000638794 IGLV5-45A0A087WSX0 123 aa9.97□□□□□ -0.81
SMN2-216ENST00000638794 RPL37AP8A6NKH3 93 aa9.97□□□□□ -0.81
SMN2-216ENST00000638794 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
SMN2-216ENST00000638794 LINC00167Q96N53 147 aa9.97□□□□□ -0.81
SMN2-216ENST00000638794 TSPAN13O95857 204 aa9.96□□□□□ -0.82
SMN2-216ENST00000638794 CST9LQ9H4G1 147 aa9.95□□□□□ -0.82
SMN2-216ENST00000638794 TRAV9-1A0A075B6T8 112 aa9.94□□□□□ -0.82
SMN2-216ENST00000638794 GAGE10A6NGK3 116 aa9.94□□□□□ -0.82
SMN2-216ENST00000638794 LINC01546A6NGU7 62 aa9.94□□□□□ -0.82
SMN2-216ENST00000638794 SPINK8P0C7L1 97 aa9.94□□□□□ -0.82
SMN2-216ENST00000638794 RAB5BP61020 215 aa9.94□□□□□ -0.82
SMN2-216ENST00000638794 CRYGAP11844 174 aa9.93□□□□□ -0.82
SMN2-216ENST00000638794 CLLU1Q5K131 121 aa9.93□□□□□ -0.82
SMN2-216ENST00000638794 IGLV5-37A0A075B6J1 123 aa9.92□□□□□ -0.82
SMN2-216ENST00000638794 LINC01549A6NIU2 74 aa9.92□□□□□ -0.82
SMN2-216ENST00000638794 GNB1LQ9BYB4 327 aa9.92□□□□□ -0.82
SMN2-216ENST00000638794 PMVKQ15126 192 aa9.91□□□□□ -0.82
SMN2-216ENST00000638794 NKAPP1Q8N9T2 125 aa9.91□□□□□ -0.82
SMN2-216ENST00000638794 TYMSOSQ8TAI1 123 aa9.91□□□□□ -0.82
SMN2-216ENST00000638794 ANAPC11Q9NYG5 84 aa9.91□□□□□ -0.82
SMN2-216ENST00000638794 TMEM218A2RU14 115 aa9.9□□□□□ -0.82
SMN2-216ENST00000638794 KRTAP13-1Q8IUC0 172 aa9.9□□□□□ -0.82
SMN2-216ENST00000638794 UQCC3Q6UW78 93 aa9.89□□□□□ -0.83
SMN2-216ENST00000638794 MRPL18Q9H0U6 180 aaKnown RBP9.89□□□□□ -0.83
SMN2-216ENST00000638794 H3BRM9 83 aa9.88□□□□□ -0.83
SMN2-216ENST00000638794 SCO1O75880 301 aa9.88□□□□□ -0.83
SMN2-216ENST00000638794 ATP5LO75964 103 aa9.88□□□□□ -0.83
SMN2-216ENST00000638794 S100PP25815 95 aa9.88□□□□□ -0.83
SMN2-216ENST00000638794 UBE2AP49459 152 aa9.88□□□□□ -0.83
SMN2-216ENST00000638794 FA2HQ7L5A8 372 aa9.88□□□□□ -0.83
SMN2-216ENST00000638794 IGKV2-28A0A075B6P5 120 aa9.87□□□□□ -0.83
SMN2-216ENST00000638794 IGKV2D-28P01615 120 aa9.87□□□□□ -0.83
SMN2-216ENST00000638794 KRTAP13-2Q52LG2 175 aa9.87□□□□□ -0.83
SMN2-216ENST00000638794 SMCO4Q9NRQ5 59 aa9.87□□□□□ -0.83
SMN2-216ENST00000638794 PFN2P35080 140 aa9.86□□□□□ -0.83
SMN2-216ENST00000638794 IGLV5-39A0A0G2JS06 123 aa9.85□□□□□ -0.83
SMN2-216ENST00000638794 IGLC3P0DOY3 106 aa9.85□□□□□ -0.83
SMN2-216ENST00000638794 FABP9Q0Z7S8 132 aa9.85□□□□□ -0.83
SMN2-216ENST00000638794 SEC11CQ9BY50 192 aa9.85□□□□□ -0.83
SMN2-216ENST00000638794 COX19Q49B96 90 aa9.84□□□□□ -0.83
SMN2-216ENST00000638794 A0A096LNJ9 63 aa9.83□□□□□ -0.84
SMN2-216ENST00000638794 PRLHP81277 87 aa9.83□□□□□ -0.84
SMN2-216ENST00000638794 FAM229BQ4G0N7 80 aa9.83□□□□□ -0.84
SMN2-216ENST00000638794 VPREB1P12018 145 aa9.82□□□□□ -0.84
SMN2-216ENST00000638794 ZNF22P17026 224 aaPredicted RBP9.82□□□□□ -0.84
SMN2-216ENST00000638794 NDUFA6P56556 154 aa9.82□□□□□ -0.84
SMN2-216ENST00000638794 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
SMN2-216ENST00000638794 ERG28Q9UKR5 140 aa9.82□□□□□ -0.84
SMN2-216ENST00000638794 TMEM238C9JI98 176 aa9.81□□□□□ -0.84
SMN2-216ENST00000638794 IFITM2Q01629 132 aa9.81□□□□□ -0.84
SMN2-216ENST00000638794 LINC00304Q8N9R0 145 aa9.81□□□□□ -0.84
SMN2-216ENST00000638794 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
SMN2-216ENST00000638794 TMEM126AQ9H061 195 aa9.81□□□□□ -0.84
SMN2-216ENST00000638794 A0A0U1RQV1 116 aa9.8□□□□□ -0.84
SMN2-216ENST00000638794 FAM19A1Q7Z5A9 133 aa9.8□□□□□ -0.84
SMN2-216ENST00000638794 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
SMN2-216ENST00000638794 MUC17Q685J3 4493 aa9.8□□□□□ -0.84
SMN2-216ENST00000638794 Q8NDZ9 215 aa9.79□□□□□ -0.84
SMN2-216ENST00000638794 ZNF625Q96I27 306 aaPredicted RBP9.79□□□□□ -0.84
SMN2-216ENST00000638794 IGKV2D-26A0A0A0MRZ7 120 aa9.78□□□□□ -0.84
SMN2-216ENST00000638794 HBDP02042 147 aa9.78□□□□□ -0.84
SMN2-216ENST00000638794 COX17Q14061 63 aa9.78□□□□□ -0.84
SMN2-216ENST00000638794 FAT4Q6V0I7 4981 aa9.77□□□□□ -0.85
SMN2-216ENST00000638794 M0R378 163 aa9.77□□□□□ -0.85
SMN2-216ENST00000638794 RPL24P83731 157 aaKnown RBP9.77□□□□□ -0.85
SMN2-216ENST00000638794 PMCHL1Q16048 86 aa9.77□□□□□ -0.85
SMN2-216ENST00000638794 C18orf32Q8TCD1 76 aa9.77□□□□□ -0.85
SMN2-216ENST00000638794 RPS10P5Q9NQ39 176 aa9.77□□□□□ -0.85
SMN2-216ENST00000638794 C11orf86A6NJI1 115 aa9.76□□□□□ -0.85
SMN2-216ENST00000638794 LINC00614P0C842 121 aa9.76□□□□□ -0.85
SMN2-216ENST00000638794 RHEBQ15382 184 aa9.76□□□□□ -0.85
SMN2-216ENST00000638794 C10orf91Q5T1B1 145 aa9.76□□□□□ -0.85
SMN2-216ENST00000638794 COMMD7Q86VX2 200 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms