RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 SPTA1P02549 2419 aa0.2□□□□□ -2.38
GYPB-216ENST00000638448 CHD1O14646 1710 aa0.2□□□□□ -2.38
GYPB-216ENST00000638448 C1orf167Q5SNV9 1468 aa0.2□□□□□ -2.38
GYPB-216ENST00000638448 ABCA2Q9BZC7 2435 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 PDCD11Q14690 1871 aaKnown RBP0.19□□□□□ -2.38
GYPB-216ENST00000638448 COL4A6Q14031 1691 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 A0A1B0GU69 56 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 LINC00959A0A1B0GUT2 108 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 ARMS2P0C7Q2 107 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 GNGT1P63211 74 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 ZNF720Q7Z2F6 126 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 DEFB107AQ8IZN7 70 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 MAST4O15021 2626 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 HIVEP3Q5T1R4 2406 aa0.19□□□□□ -2.38
GYPB-216ENST00000638448 SCN7AQ01118 1682 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 PLEKHH2Q8IVE3 1493 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 NLRP1Q9C000 1473 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 RAPGEF2Q9Y4G8 1499 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 H0Y9P7 68 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 GYPAP02724 150 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 COX6B1P14854 86 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 DEFB109BQ30KR1 87 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 ETDBQ3ZM63 59 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 C6orf201Q7Z4U5 140 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 V9GYS6 101 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 WNK2Q9Y3S1 2297 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 PIEZO2Q9H5I5 2752 aa0.18□□□□□ -2.38
GYPB-216ENST00000638448 HRNRQ86YZ3 2850 aaPredicted RBP0.17□□□□□ -2.38
GYPB-216ENST00000638448 NRXN1Q9ULB1 1477 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 PAPPAQ13219 1627 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 D6R8Y8 96 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 F8WEM9 126 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 LEPROTL1O95214 131 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 SPRR1AP35321 89 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 HMGN3Q15651 99 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 ALKAL2Q6UX46 152 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 MUSTN1Q8IVN3 82 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 C20orf78Q9BR46 151 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 PSENENQ9NZ42 101 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 HIGD1BQ9P298 99 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 SETBP1Q9Y6X0 1596 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 CHD6Q8TD26 2715 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 ABCC2Q92887 1545 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 TENM4Q6N022 2769 aa0.17□□□□□ -2.38
GYPB-216ENST00000638448 CSPG4Q6UVK1 2322 aa0.16□□□□□ -2.38
GYPB-216ENST00000638448 HUWE1Q7Z6Z7 4374 aaKnown RBP0.16□□□□□ -2.38
GYPB-216ENST00000638448 CELSR1Q9NYQ6 3014 aa0.16□□□□□ -2.38
GYPB-216ENST00000638448 K7EQZ3 153 aa0.16□□□□□ -2.38
GYPB-216ENST00000638448 SMIM11AP58511 58 aa0.16□□□□□ -2.38
GYPB-216ENST00000638448 USMG5Q96IX5 58 aa0.16□□□□□ -2.38
GYPB-216ENST00000638448 MAP1BP46821 2468 aaKnown RBP0.16□□□□□ -2.38
GYPB-216ENST00000638448 CHD8Q9HCK8 2581 aa0.16□□□□□ -2.38
GYPB-216ENST00000638448 NUP188Q5SRE5 1749 aa0.16□□□□□ -2.38
GYPB-216ENST00000638448 KNDC1Q76NI1 1749 aa0.16□□□□□ -2.38
GYPB-216ENST00000638448 MARF1Q9Y4F3 1742 aaKnown RBP0.16□□□□□ -2.38
GYPB-216ENST00000638448 KMT2DO14686 5537 aa0.15□□□□□ -2.38
GYPB-216ENST00000638448 EDC4Q6P2E9 1401 aaKnown RBP0.15□□□□□ -2.39
GYPB-216ENST00000638448 AKAP12Q02952 1782 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 COX8AP10176 69 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 SPRR1BP22528 89 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 PEA15Q15121 130 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 PYY3Q5JQD4 70 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 FXYD6Q9H0Q3 95 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 CRIPTQ9P021 101 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 XRN1Q8IZH2 1706 aaKnown RBP0.15□□□□□ -2.39
GYPB-216ENST00000638448 ATP10BO94823 1461 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 ATRQ13535 2644 aa0.15□□□□□ -2.39
GYPB-216ENST00000638448 BAZ1AQ9NRL2 1556 aaPredicted RBP0.15□□□□□ -2.39
GYPB-216ENST00000638448 TROQ12816 1431 aaPredicted RBP0.14□□□□□ -2.39
GYPB-216ENST00000638448 EPRSP07814 1512 aaKnown RBP0.14□□□□□ -2.39
GYPB-216ENST00000638448 A0A0G2JMZ2 1700 aa0.14□□□□□ -2.39
GYPB-216ENST00000638448 ANKRD26Q9UPS8 1709 aa0.14□□□□□ -2.39
GYPB-216ENST00000638448 K7EP34 96 aa0.14□□□□□ -2.39
GYPB-216ENST00000638448 HMGN2P05204 90 aaKnown RBP0.14□□□□□ -2.39
GYPB-216ENST00000638448 GNG2P59768 71 aa0.14□□□□□ -2.39
GYPB-216ENST00000638448 MUC5ACP98088 5654 aa0.14□□□□□ -2.39
GYPB-216ENST00000638448 IQSEC2Q5JU85 1478 aa0.14□□□□□ -2.39
GYPB-216ENST00000638448 CCDC141Q6ZP82 1450 aa0.14□□□□□ -2.39
GYPB-216ENST00000638448 PPRC1Q5VV67 1664 aaKnown RBP0.14□□□□□ -2.39
GYPB-216ENST00000638448 AHNAKQ09666 5890 aaKnown RBP0.13□□□□□ -2.39
GYPB-216ENST00000638448 APC2O95996 2303 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 PVALEFA0A1B0GWK0 134 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 CPSF4LA6NMK7 179 aaKnown RBP0.13□□□□□ -2.39
GYPB-216ENST00000638448 I3L3M4 83 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 CYB5AP00167 134 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 IGLC2P0DOY2 106 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 IGLC3P0DOY3 106 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 C9orf62Q8N4C0 152 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 S100A16Q96FQ6 103 aaKnown RBP0.13□□□□□ -2.39
GYPB-216ENST00000638448 FANCAO15360 1455 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 TTC37Q6PGP7 1564 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 CLTCQ00610 1675 aaKnown RBP0.13□□□□□ -2.39
GYPB-216ENST00000638448 WNK1Q9H4A3 2382 aa0.13□□□□□ -2.39
GYPB-216ENST00000638448 FAT2Q9NYQ8 4349 aa0.12□□□□□ -2.39
GYPB-216ENST00000638448 PAPPA2Q9BXP8 1791 aa0.12□□□□□ -2.39
GYPB-216ENST00000638448 COL7A1Q02388 2944 aa0.12□□□□□ -2.39
GYPB-216ENST00000638448 SMARCA2P51531 1590 aa0.12□□□□□ -2.39
GYPB-216ENST00000638448 CACNA1AO00555 2505 aa0.12□□□□□ -2.39
GYPB-216ENST00000638448 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.12□□□□□ -2.39
GYPB-216ENST00000638448 PLIN4Q96Q06 1357 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 272.7 ms