RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 Q6ZTC4 211 aa11.92□□□□□ -0.5
CACNA1A-258ENST00000638029 TRBV7-7A0A0K0K1E9 115 aa11.91□□□□□ -0.5
CACNA1A-258ENST00000638029 M0QY20 66 aa11.91□□□□□ -0.5
CACNA1A-258ENST00000638029 A0A087WVE0 104 aa11.9□□□□□ -0.5
CACNA1A-258ENST00000638029 hDV103S1A0JD37 113 aa11.89□□□□□ -0.51
CACNA1A-258ENST00000638029 COL27A1Q8IZC6 1860 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-258ENST00000638029 UNQ6190/PRO20217Q6UXQ8 127 aa11.89□□□□□ -0.51
CACNA1A-258ENST00000638029 ZNF702PQ9H963 129 aa11.89□□□□□ -0.51
CACNA1A-258ENST00000638029 FN1P02751 2386 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-258ENST00000638029 ACYP2P14621 99 aa11.88□□□□□ -0.51
CACNA1A-258ENST00000638029 CHTF8P0CG12 524 aa11.87□□□□□ -0.51
CACNA1A-258ENST00000638029 LINC00575Q6W349 94 aa11.87□□□□□ -0.51
CACNA1A-258ENST00000638029 A8MTW9 85 aa11.87□□□□□ -0.51
CACNA1A-258ENST00000638029 C16orf90A8MZG2 172 aa11.87□□□□□ -0.51
CACNA1A-258ENST00000638029 TLN1Q9Y490 2541 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-258ENST00000638029 C2orf91Q6ZV80 131 aa11.86□□□□□ -0.51
CACNA1A-258ENST00000638029 COX17Q14061 63 aa11.86□□□□□ -0.51
CACNA1A-258ENST00000638029 LIMD2Q9BT23 127 aa11.86□□□□□ -0.51
CACNA1A-258ENST00000638029 Q6JHZ5 121 aa11.85□□□□□ -0.51
CACNA1A-258ENST00000638029 C4orf26Q17RF5 130 aa11.85□□□□□ -0.51
CACNA1A-258ENST00000638029 PSMG3-AS1Q96PY0 264 aa11.85□□□□□ -0.51
CACNA1A-258ENST00000638029 TRBV10-3A0A0K0K1G6 114 aa11.84□□□□□ -0.51
CACNA1A-258ENST00000638029 A0A1B0GU69 56 aa11.84□□□□□ -0.51
CACNA1A-258ENST00000638029 A0A087WSZ3 146 aa11.84□□□□□ -0.51
CACNA1A-258ENST00000638029 CRIP1P50238 77 aa11.84□□□□□ -0.51
CACNA1A-258ENST00000638029 LINC00574Q9H8X3 128 aa11.84□□□□□ -0.51
CACNA1A-258ENST00000638029 MRGPRG-AS1Q2M3A8 158 aa11.83□□□□□ -0.52
CACNA1A-258ENST00000638029 A0A087WYN8 130 aa11.83□□□□□ -0.52
CACNA1A-258ENST00000638029 MBD6Q96DN6 1003 aa11.83□□□□□ -0.52
CACNA1A-258ENST00000638029 TLN2Q9Y4G6 2542 aa11.83□□□□□ -0.52
CACNA1A-258ENST00000638029 TSHBP01222 138 aa11.82□□□□□ -0.52
CACNA1A-258ENST00000638029 EDN2P20800 178 aa11.81□□□□□ -0.52
CACNA1A-258ENST00000638029 SSBP3-AS1Q7Z2R9 100 aa11.8□□□□□ -0.52
CACNA1A-258ENST00000638029 RNF185Q96GF1 192 aa11.8□□□□□ -0.52
CACNA1A-258ENST00000638029 MOBPQ13875 183 aa11.8□□□□□ -0.52
CACNA1A-258ENST00000638029 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.79□□□□□ -0.52
CACNA1A-258ENST00000638029 FHL2Q14192 279 aa11.79□□□□□ -0.52
CACNA1A-258ENST00000638029 C11orf71Q6IPW1 123 aa11.79□□□□□ -0.52
CACNA1A-258ENST00000638029 Q8N3U1 123 aa11.79□□□□□ -0.52
CACNA1A-258ENST00000638029 PCSK5Q92824 1860 aa11.78□□□□□ -0.52
CACNA1A-258ENST00000638029 P0C879 139 aa11.78□□□□□ -0.52
CACNA1A-258ENST00000638029 C11orf1Q9H5F2 150 aa11.78□□□□□ -0.52
CACNA1A-258ENST00000638029 C1orf229Q6ZS94 237 aaPredicted RBP11.78□□□□□ -0.52
CACNA1A-258ENST00000638029 NTM-AS1Q6ZSK4 140 aa11.78□□□□□ -0.52
CACNA1A-258ENST00000638029 Q8N814 137 aa11.77□□□□□ -0.53
CACNA1A-258ENST00000638029 FSTL3O95633 263 aa11.77□□□□□ -0.53
CACNA1A-258ENST00000638029 MDFIQ99750 246 aa11.76□□□□□ -0.53
CACNA1A-258ENST00000638029 NRACQ8N912 160 aa11.76□□□□□ -0.53
CACNA1A-258ENST00000638029 TYMSOSQ8TAI1 123 aa11.75□□□□□ -0.53
CACNA1A-258ENST00000638029 LINC00242Q5T6M2 205 aa11.74□□□□□ -0.53
CACNA1A-258ENST00000638029 C1orf64Q8NEQ6 169 aa11.74□□□□□ -0.53
CACNA1A-258ENST00000638029 KRTAP10-9P60411 292 aa11.74□□□□□ -0.53
CACNA1A-258ENST00000638029 APLNQ9ULZ1 77 aa11.73□□□□□ -0.53
CACNA1A-258ENST00000638029 PRO0628Q9UI54 55 aa11.73□□□□□ -0.53
CACNA1A-258ENST00000638029 BRWD1-AS2P59051 145 aa11.72□□□□□ -0.53
CACNA1A-258ENST00000638029 PRR9Q5T870 116 aa11.72□□□□□ -0.53
CACNA1A-258ENST00000638029 Q8N6K4 173 aa11.71□□□□□ -0.53
CACNA1A-258ENST00000638029 EIF4EBP1Q13541 118 aaPredicted RBP11.71□□□□□ -0.54
CACNA1A-258ENST00000638029 GAS8-AS1O95177 125 aa11.71□□□□□ -0.54
CACNA1A-258ENST00000638029 Q8IZM0 81 aa11.7□□□□□ -0.54
CACNA1A-258ENST00000638029 MUC22E2RYF6 1773 aaPredicted RBP11.7□□□□□ -0.54
CACNA1A-258ENST00000638029 YPEL4Q96NS1 127 aa11.7□□□□□ -0.54
CACNA1A-258ENST00000638029 IGLV4-60A0A075B6I1 120 aa11.69□□□□□ -0.54
CACNA1A-258ENST00000638029 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
CACNA1A-258ENST00000638029 Q96NJ1 140 aa11.68□□□□□ -0.54
CACNA1A-258ENST00000638029 PIEZO1Q92508 2521 aa11.67□□□□□ -0.54
CACNA1A-258ENST00000638029 ATP11AUNQ6ZP68 121 aa11.67□□□□□ -0.54
CACNA1A-258ENST00000638029 KLLNB2CW77 178 aa11.67□□□□□ -0.54
CACNA1A-258ENST00000638029 Q6ZPA2 131 aa11.67□□□□□ -0.54
CACNA1A-258ENST00000638029 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-258ENST00000638029 GOLGB1Q14789 3259 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-258ENST00000638029 TMEM254Q8TBM7 123 aa11.65□□□□□ -0.54
CACNA1A-258ENST00000638029 CR1P17927 2039 aa11.65□□□□□ -0.54
CACNA1A-258ENST00000638029 C8orf87E5RJ46 101 aa11.64□□□□□ -0.55
CACNA1A-258ENST00000638029 SMIM29Q86T20 159 aa11.64□□□□□ -0.55
CACNA1A-258ENST00000638029 C6orf48Q9UBA6 75 aa11.64□□□□□ -0.55
CACNA1A-258ENST00000638029 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
CACNA1A-258ENST00000638029 IGLV1-40P01703 118 aa11.63□□□□□ -0.55
CACNA1A-258ENST00000638029 LINC00313P59037 77 aa11.63□□□□□ -0.55
CACNA1A-258ENST00000638029 ZNF295-AS1Q8N0V1 137 aa11.63□□□□□ -0.55
CACNA1A-258ENST00000638029 SMCR5Q8TEV8 140 aa11.63□□□□□ -0.55
CACNA1A-258ENST00000638029 CXCL6P80162 114 aa11.62□□□□□ -0.55
CACNA1A-258ENST00000638029 CDSNQ15517 529 aa11.61□□□□□ -0.55
CACNA1A-258ENST00000638029 LINC01554Q52M75 96 aa11.61□□□□□ -0.55
CACNA1A-258ENST00000638029 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
CACNA1A-258ENST00000638029 EGFEM1PQ0D2K5 195 aa11.6□□□□□ -0.55
CACNA1A-258ENST00000638029 FHL3Q13643 280 aa11.6□□□□□ -0.55
CACNA1A-258ENST00000638029 LYPD5Q6UWN5 251 aa11.59□□□□□ -0.55
CACNA1A-258ENST00000638029 EP400Q96L91 3159 aa11.59□□□□□ -0.55
CACNA1A-258ENST00000638029 AVPP01185 164 aa11.58□□□□□ -0.56
CACNA1A-258ENST00000638029 ZNF580Q9UK33 172 aa11.58□□□□□ -0.56
CACNA1A-258ENST00000638029 NAV2Q8IVL1 2488 aa11.58□□□□□ -0.56
CACNA1A-258ENST00000638029 C22orf24Q9Y442 160 aa11.58□□□□□ -0.56
CACNA1A-258ENST00000638029 FLG2Q5D862 2391 aaPredicted RBP11.58□□□□□ -0.56
CACNA1A-258ENST00000638029 POLR2KP53803 58 aaKnown RBP11.58□□□□□ -0.56
CACNA1A-258ENST00000638029 Q6ZRU5 148 aa11.58□□□□□ -0.56
CACNA1A-258ENST00000638029 C9orf92A6NGG3 77 aa11.57□□□□□ -0.56
CACNA1A-258ENST00000638029 C11orf21Q9P2W6 132 aa11.57□□□□□ -0.56
CACNA1A-258ENST00000638029 ANKRD17O75179 2603 aaKnown RBP11.57□□□□□ -0.56
CACNA1A-258ENST00000638029 KIAA0087Q14695 138 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms