RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 COX7B2Q8TF08 81 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 LINC00846Q9NV44 126 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 CCL26Q9Y258 94 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 E9PCH4 1651 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 INTS1Q8N201 2190 aaKnown RBP1.66□□□□□ -2.14
PSPC1-208ENST00000635562 KMT2BQ9UMN6 2715 aaPredicted RBP1.66□□□□□ -2.14
PSPC1-208ENST00000635562 SPAG17Q6Q759 2223 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 TOGARAM1Q9Y4F4 1720 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 TULP4Q9NRJ4 1543 aa1.66□□□□□ -2.14
PSPC1-208ENST00000635562 ABCA4P78363 2273 aa1.65□□□□□ -2.14
PSPC1-208ENST00000635562 LCE6AA0A183 80 aa1.65□□□□□ -2.15
PSPC1-208ENST00000635562 A0A1B0GUT8 65 aa1.65□□□□□ -2.15
PSPC1-208ENST00000635562 TRBV6-4A0A1B0GX49 114 aa1.65□□□□□ -2.15
PSPC1-208ENST00000635562 M0R135 149 aa1.65□□□□□ -2.15
PSPC1-208ENST00000635562 IFI6P09912 130 aa1.65□□□□□ -2.15
PSPC1-208ENST00000635562 LY6EQ16553 131 aa1.65□□□□□ -2.15
PSPC1-208ENST00000635562 R4GMQ9 66 aa1.65□□□□□ -2.15
PSPC1-208ENST00000635562 GCC2Q8IWJ2 1684 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 DOCK10Q96BY6 2186 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 COL4A2P08572 1712 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 A0A087WTM6 91 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 UQCR11O14957 56 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 HRES1P13985 223 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 ZNF137PP52743 207 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 TPRXLQ17RH7 258 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 ABRACLQ9P1F3 81 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 DEPDC5O75140 1603 aa1.64□□□□□ -2.15
PSPC1-208ENST00000635562 COL4A4P53420 1690 aaPredicted RBP1.64□□□□□ -2.15
PSPC1-208ENST00000635562 C4AP0C0L4 1744 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 A0A1W2PNN7 141 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 JMJD7-PLA2G4BH0Y9G9 81 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 M0R3E3 92 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 NDUFB1O75438 58 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 DNAL4O96015 105 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 NREPQ16612 68 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 SPACA4Q8TDM5 124 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 SPRR4Q96PI1 79 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 PLXNB2O15031 1838 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 SAMD9LQ8IVG5 1584 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 DUOX1Q9NRD9 1551 aa1.63□□□□□ -2.15
PSPC1-208ENST00000635562 TRAV40A0A0B4J280 105 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 A0A0G2JQZ4 141 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 NBDYA0A0U1RRE5 68 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 LRCOL1A6NCL2 159 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 H0Y9P7 68 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 MGPP08493 103 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 SPATA8Q6RVD6 105 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 Q8N9L7 120 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 ZCCHC13Q8WW36 166 aaKnown RBP1.62□□□□□ -2.15
PSPC1-208ENST00000635562 OBSCN-AS1Q96MR7 158 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 WFDC6Q9BQY6 131 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 TXNDC17Q9BRA2 123 aa1.62□□□□□ -2.15
PSPC1-208ENST00000635562 IGKV2-40A0A087WW87 121 aaPredicted RBP1.61□□□□□ -2.15
PSPC1-208ENST00000635562 TRAV21A0A0B4J279 112 aa1.61□□□□□ -2.15
PSPC1-208ENST00000635562 J3QRE1 110 aa1.61□□□□□ -2.15
PSPC1-208ENST00000635562 IGKV2D-40P01614 121 aaPredicted RBP1.61□□□□□ -2.15
PSPC1-208ENST00000635562 RNASE3P12724 160 aaKnown RBP1.61□□□□□ -2.15
PSPC1-208ENST00000635562 SPINK7P58062 85 aa1.61□□□□□ -2.15
PSPC1-208ENST00000635562 RPL37AP61513 92 aaKnown RBP1.61□□□□□ -2.15
PSPC1-208ENST00000635562 LINC00322Q6ZN03 302 aaPredicted RBP1.61□□□□□ -2.15
PSPC1-208ENST00000635562 TMEM263Q8WUH6 116 aaKnown RBP1.61□□□□□ -2.15
PSPC1-208ENST00000635562 LINC00208Q96KT6 92 aa1.61□□□□□ -2.15
PSPC1-208ENST00000635562 V9GYV3 84 aa1.61□□□□□ -2.15
PSPC1-208ENST00000635562 LMO7Q8WWI1 1683 aa1.61□□□□□ -2.15
PSPC1-208ENST00000635562 SDK1Q7Z5N4 2213 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 CTXND1A0A1B0GTU2 59 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 SMIM27A0A1W2PRY6 76 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 IGLV3-19P01714 112 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 IL9P15248 144 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 FCER1GP30273 86 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 DEFB134Q4QY38 66 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 KLK9Q9UKQ9 250 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 LRRC37A2A6NM11 1700 aa1.6□□□□□ -2.15
PSPC1-208ENST00000635562 K7EMI3 77 aa1.59□□□□□ -2.15
PSPC1-208ENST00000635562 FXYD3Q14802 87 aa1.59□□□□□ -2.15
PSPC1-208ENST00000635562 C10orf55Q5SWW7 151 aa1.59□□□□□ -2.15
PSPC1-208ENST00000635562 C5orf56Q8N8D9 126 aa1.59□□□□□ -2.15
PSPC1-208ENST00000635562 C4BP0C0L5 1744 aa1.59□□□□□ -2.16
PSPC1-208ENST00000635562 CACNA1CQ13936 2221 aa1.59□□□□□ -2.16
PSPC1-208ENST00000635562 SEC16AO15027 2179 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 A0A0G2JMZ2 1700 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 LRRC37AA6NMS7 1700 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 TRAV1-2A0A0B4J238 106 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 TRBV6-1A0A0K0K1D8 114 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 IGKV2-29A2NJV5 120 aaPredicted RBP1.58□□□□□ -2.16
PSPC1-208ENST00000635562 PRB2P02812 416 aaPredicted RBP1.58□□□□□ -2.16
PSPC1-208ENST00000635562 PLNP26678 52 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 COX17Q14061 63 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 C10orf113Q5VZT2 155 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 ENHOQ6UWT2 76 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 Q96NJ1 140 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 WFDC10AQ9H1F0 79 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 LINC00472Q9H8W2 130 aa1.58□□□□□ -2.16
PSPC1-208ENST00000635562 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.57□□□□□ -2.16
PSPC1-208ENST00000635562 LOC110117498A0A087WWA1 95 aa1.57□□□□□ -2.16
PSPC1-208ENST00000635562 TRGV4A0A0C4DH28 118 aa1.57□□□□□ -2.16
PSPC1-208ENST00000635562 CAV3P56539 151 aa1.57□□□□□ -2.16
PSPC1-208ENST00000635562 SNRPGP62308 76 aaKnown RBP1.57□□□□□ -2.16
PSPC1-208ENST00000635562 SERF2P84101 59 aa1.57□□□□□ -2.16
PSPC1-208ENST00000635562 LINC00304Q8N9R0 145 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms