RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 KRTAP19-6Q3LI70 58 aa-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 C12orf73Q69YU5 71 aa-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 ANP32BQ92688 251 aaKnown RBP-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 NDUFA4L2Q9NRX3 87 aa-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 DOCK1Q14185 1865 aa-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 CDK5RAP2Q96SN8 1893 aa-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 REV3LO60673 3130 aa-0.86□□□□□ -2.55
SCARNA4-201ENST00000629045 KALRNO60229 2985 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 ZFHX3Q15911 3703 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 SETBP1Q9Y6X0 1596 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 HMGXB3Q12766 1538 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 IGLC7A0M8Q6 106 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 H7BZZ5 65 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 ZZEF1O43149 2961 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 MT1EP04732 61 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 SMIM21Q3B7S5 101 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 FDCSPQ8NFU4 85 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 COPS9Q8WXC6 57 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 MT1LQ93083 61 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 PDCD10Q9BUL8 212 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 DYNLRB1Q9NP97 96 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 CDC42SE2Q9NRR3 84 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 CRIPTQ9P021 101 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 CDKN2A-AS1Q9UH64 79 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 LINC01558Q9Y6Z2 57 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 CCDC141Q6ZP82 1450 aa-0.87□□□□□ -2.55
SCARNA4-201ENST00000629045 FRYQ5TBA9 3013 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 PRDM2Q13029 1718 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 MGPP08493 103 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 KRTAP19-5Q3LI72 72 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 WFDC13Q8IUB5 93 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 MGST2Q99735 147 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 MRPL34Q9BQ48 92 aaKnown RBP-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 MYH13Q9UKX3 1938 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 SHANK2Q9UPX8 1470 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 BCORQ6W2J9 1755 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 CSMD1Q96PZ7 3565 aa-0.88□□□□□ -2.55
SCARNA4-201ENST00000629045 DNAH8Q96JB1 4490 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 C5orf42Q9H799 3197 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 SMG1Q96Q15 3661 aaKnown RBP-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 TLN2Q9Y4G6 2542 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 CCL22O00626 93 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 SMR3BP02814 79 aaPredicted RBP-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 BTG2P78543 158 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 LSM10Q969L4 123 aaKnown RBP-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 ARHGEF5Q12774 1597 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 CDC42BPGQ6DT37 1551 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 SBF2Q86WG5 1849 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 KIAA0556O60303 1618 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 CICQ96RK0 1608 aaPredicted RBP-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 ARHGEF12Q9NZN5 1544 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 DNAH17Q9UFH2 4485 aa-0.89□□□□□ -2.55
SCARNA4-201ENST00000629045 DNAH5Q8TE73 4624 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 TRBV7-3A0A075B6L6 115 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 HMGN4O00479 90 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 TSLPQ969D9 159 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 SPRR4Q96PI1 79 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 HIGD1BQ9P298 99 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 SERP1Q9Y6X1 66 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 SPTAN1Q13813 2472 aaKnown RBP-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 FMN2Q9NZ56 1722 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 NWD2Q9ULI1 1742 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 ALKQ9UM73 1620 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 MAP3K1Q13233 1512 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 LRBAP50851 2863 aa-0.9□□□□□ -2.55
SCARNA4-201ENST00000629045 PAPPA2Q9BXP8 1791 aa-0.91□□□□□ -2.55
SCARNA4-201ENST00000629045 ZNF236Q9UL36 1845 aa-0.91□□□□□ -2.55
SCARNA4-201ENST00000629045 LOC285095A0A1B0GVY8 99 aa-0.91□□□□□ -2.56
SCARNA4-201ENST00000629045 SFT2D2O95562 160 aa-0.91□□□□□ -2.56
SCARNA4-201ENST00000629045 WFDC9Q8NEX5 89 aa-0.91□□□□□ -2.56
SCARNA4-201ENST00000629045 RERGLQ9H628 205 aa-0.91□□□□□ -2.56
SCARNA4-201ENST00000629045 TRRAPQ9Y4A5 3859 aa-0.91□□□□□ -2.56
SCARNA4-201ENST00000629045 SMG6Q86US8 1419 aaKnown RBP-0.91□□□□□ -2.56
SCARNA4-201ENST00000629045 LINC00959A0A1B0GUT2 108 aa-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 SNCAP37840 140 aa-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 ARPC4P59998 168 aa-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 UBA52P62987 128 aaKnown RBP-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 TMEM263Q8WUH6 116 aaKnown RBP-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 LINC01600Q96MT4 127 aa-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 PFDN5Q99471 154 aa-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 UBE2D4Q9Y2X8 147 aa-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 PATJQ8NI35 1801 aa-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 ARAP2Q8WZ64 1704 aa-0.92□□□□□ -2.56
SCARNA4-201ENST00000629045 DMXL2Q8TDJ6 3036 aa-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 SPENQ96T58 3664 aaKnown RBP-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 DEFB4AO15263 64 aa-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 MRPL54Q6P161 138 aaKnown RBP-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 PP6455Q8WZ26 134 aa-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 PPP3R2Q96LZ3 170 aa-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 FAIMQ9NVQ4 179 aa-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 PSENENQ9NZ42 101 aa-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 CFTRP13569 1480 aa-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 ABCC10Q5T3U5 1492 aa-0.93□□□□□ -2.56
SCARNA4-201ENST00000629045 KIF21AQ7Z4S6 1674 aa-0.94□□□□□ -2.56
SCARNA4-201ENST00000629045 TRANK1O15050 2925 aa-0.94□□□□□ -2.56
SCARNA4-201ENST00000629045 FAM223BA6NKX1 122 aa-0.94□□□□□ -2.56
SCARNA4-201ENST00000629045 SEC11AP67812 179 aa-0.94□□□□□ -2.56
SCARNA4-201ENST00000629045 PRLHP81277 87 aa-0.94□□□□□ -2.56
SCARNA4-201ENST00000629045 SNRNP25Q9BV90 132 aaKnown RBP-0.94□□□□□ -2.56
SCARNA4-201ENST00000629045 PRO1933Q9H354 126 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms