RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 SCXQ7RTU7 201 aa12.91□□□□□ -0.34
R3HCC1-210ENST00000625275 ORAOV1Q8WV07 137 aa12.91□□□□□ -0.34
R3HCC1-210ENST00000625275 HERC1Q15751 4861 aa12.9□□□□□ -0.34
R3HCC1-210ENST00000625275 SMIM1B2RUZ4 78 aa12.9□□□□□ -0.34
R3HCC1-210ENST00000625275 TMEM170BQ5T4T1 132 aa12.9□□□□□ -0.34
R3HCC1-210ENST00000625275 LINC01545Q5VT33 79 aa12.9□□□□□ -0.34
R3HCC1-210ENST00000625275 OR10D4PQ8NGN7 298 aa12.9□□□□□ -0.34
R3HCC1-210ENST00000625275 LINC00526Q96FQ7 95 aa12.9□□□□□ -0.34
R3HCC1-210ENST00000625275 H3BRM9 83 aa12.89□□□□□ -0.35
R3HCC1-210ENST00000625275 DPM2O94777 84 aa12.89□□□□□ -0.35
R3HCC1-210ENST00000625275 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
R3HCC1-210ENST00000625275 PLNP26678 52 aa12.89□□□□□ -0.35
R3HCC1-210ENST00000625275 SPAG11BQ08648 103 aa12.88□□□□□ -0.35
R3HCC1-210ENST00000625275 ZNF561-AS1K7EIQ3 104 aa12.87□□□□□ -0.35
R3HCC1-210ENST00000625275 SLPIP03973 132 aa12.87□□□□□ -0.35
R3HCC1-210ENST00000625275 IGKCP01834 107 aa12.86□□□□□ -0.35
R3HCC1-210ENST00000625275 KIAA0087Q14695 138 aa12.85□□□□□ -0.35
R3HCC1-210ENST00000625275 CNBPP62633 177 aaKnown RBP12.85□□□□□ -0.35
R3HCC1-210ENST00000625275 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
R3HCC1-210ENST00000625275 TMEM223A0PJW6 202 aa12.84□□□□□ -0.35
R3HCC1-210ENST00000625275 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
R3HCC1-210ENST00000625275 C20orf202A1L168 122 aa12.83□□□□□ -0.36
R3HCC1-210ENST00000625275 Q8IZM0 81 aa12.83□□□□□ -0.36
R3HCC1-210ENST00000625275 CIRBP-AS1Q8TBR5 109 aa12.83□□□□□ -0.36
R3HCC1-210ENST00000625275 C2orf48Q96LS8 159 aa12.82□□□□□ -0.36
R3HCC1-210ENST00000625275 PRSS2P07478 247 aa12.81□□□□□ -0.36
R3HCC1-210ENST00000625275 COX7B2Q8TF08 81 aa12.81□□□□□ -0.36
R3HCC1-210ENST00000625275 CAMK2N2Q96S95 79 aa12.81□□□□□ -0.36
R3HCC1-210ENST00000625275 J3QL48 77 aa12.8□□□□□ -0.36
R3HCC1-210ENST00000625275 SYCNQ0VAF6 134 aa12.8□□□□□ -0.36
R3HCC1-210ENST00000625275 C2orf82Q6UX34 121 aa12.8□□□□□ -0.36
R3HCC1-210ENST00000625275 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.79□□□□□ -0.36
R3HCC1-210ENST00000625275 C6orf226Q5I0X4 101 aa12.79□□□□□ -0.36
R3HCC1-210ENST00000625275 Q6ZRU5 148 aa12.79□□□□□ -0.36
R3HCC1-210ENST00000625275 CARD19Q96LW7 228 aa12.78□□□□□ -0.36
R3HCC1-210ENST00000625275 F8WDY8 70 aa12.78□□□□□ -0.36
R3HCC1-210ENST00000625275 NDUFA1O15239 70 aa12.78□□□□□ -0.36
R3HCC1-210ENST00000625275 C10orf25Q5T742 122 aa12.78□□□□□ -0.36
R3HCC1-210ENST00000625275 ATOH7Q8N100 152 aa12.78□□□□□ -0.36
R3HCC1-210ENST00000625275 C9orf163Q8N9P6 203 aa12.78□□□□□ -0.36
R3HCC1-210ENST00000625275 KRTAP10-4P60372 401 aaPredicted RBP12.77□□□□□ -0.37
R3HCC1-210ENST00000625275 CKS1BP61024 79 aa12.77□□□□□ -0.37
R3HCC1-210ENST00000625275 UNQ6190/PRO20217Q6UXQ8 127 aa12.77□□□□□ -0.37
R3HCC1-210ENST00000625275 HERVK_113P61574 105 aa12.76□□□□□ -0.37
R3HCC1-210ENST00000625275 KRTAP29-1A8MX34 341 aaPredicted RBP12.75□□□□□ -0.37
R3HCC1-210ENST00000625275 CXCL5P42830 114 aa12.75□□□□□ -0.37
R3HCC1-210ENST00000625275 STPG4Q8N801 248 aa12.75□□□□□ -0.37
R3HCC1-210ENST00000625275 AKR1D1P51857 326 aa12.74□□□□□ -0.37
R3HCC1-210ENST00000625275 C6orf48Q9UBA6 75 aa12.74□□□□□ -0.37
R3HCC1-210ENST00000625275 SCGB1D1O95968 90 aa12.73□□□□□ -0.37
R3HCC1-210ENST00000625275 LEPROTO15243 131 aa12.72□□□□□ -0.37
R3HCC1-210ENST00000625275 TSPEAR-AS2P59090 65 aa12.72□□□□□ -0.37
R3HCC1-210ENST00000625275 E9PLD3 99 aa12.72□□□□□ -0.37
R3HCC1-210ENST00000625275 TRBV30A0A0K0K1B3 111 aa12.71□□□□□ -0.38
R3HCC1-210ENST00000625275 RNF151Q2KHN1 245 aa12.71□□□□□ -0.38
R3HCC1-210ENST00000625275 PLEKHB2Q96CS7 222 aa12.71□□□□□ -0.38
R3HCC1-210ENST00000625275 C9orf116Q5BN46 136 aaPredicted RBP12.7□□□□□ -0.38
R3HCC1-210ENST00000625275 SDIM1Q6ZPB5 146 aa12.7□□□□□ -0.38
R3HCC1-210ENST00000625275 ZNF625Q96I27 306 aaPredicted RBP12.7□□□□□ -0.38
R3HCC1-210ENST00000625275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.7□□□□□ -0.38
R3HCC1-210ENST00000625275 J3QQQ9 107 aa12.69□□□□□ -0.38
R3HCC1-210ENST00000625275 IGKV2D-26A0A0A0MRZ7 120 aa12.68□□□□□ -0.38
R3HCC1-210ENST00000625275 RPL37AP61513 92 aaKnown RBP12.68□□□□□ -0.38
R3HCC1-210ENST00000625275 JOSD1Q15040 202 aaPredicted RBP12.68□□□□□ -0.38
R3HCC1-210ENST00000625275 MAJINQ3KP22 176 aa12.68□□□□□ -0.38
R3HCC1-210ENST00000625275 ANKRD39Q53RE8 183 aa12.67□□□□□ -0.38
R3HCC1-210ENST00000625275 NDUFA12Q9UI09 145 aa12.67□□□□□ -0.38
R3HCC1-210ENST00000625275 PANO1I0J062 215 aa12.66□□□□□ -0.38
R3HCC1-210ENST00000625275 LGALS3P17931 250 aaKnown RBP12.66□□□□□ -0.38
R3HCC1-210ENST00000625275 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
R3HCC1-210ENST00000625275 LOC107984640A0A0U1RRK4 108 aa12.65□□□□□ -0.38
R3HCC1-210ENST00000625275 A0A096LNI7 61 aa12.64□□□□□ -0.39
R3HCC1-210ENST00000625275 LOC105371267A0A1B0GV96 52 aa12.64□□□□□ -0.39
R3HCC1-210ENST00000625275 TLX1NBP0CAT3 122 aa12.64□□□□□ -0.39
R3HCC1-210ENST00000625275 CIRBPQ14011 172 aaKnown RBP12.64□□□□□ -0.39
R3HCC1-210ENST00000625275 PYY3Q5JQD4 70 aa12.64□□□□□ -0.39
R3HCC1-210ENST00000625275 MYMXA0A1B0GTQ4 84 aa12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 NDUFC2-KCTD14E9PQ53 114 aa12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 OXTP01178 125 aa12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 CHTF8P0CG12 524 aa12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 NMUP48645 174 aa12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 RPL18AQ02543 176 aaKnown RBP12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 Q6ZRP5 223 aa12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 PKIGQ9Y2B9 76 aa12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 LRP1Q07954 4544 aaKnown RBP12.63□□□□□ -0.39
R3HCC1-210ENST00000625275 HSBP1L1C9JCN9 74 aa12.62□□□□□ -0.39
R3HCC1-210ENST00000625275 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
R3HCC1-210ENST00000625275 IGKV2-24A0A0C4DH68 120 aa12.61□□□□□ -0.39
R3HCC1-210ENST00000625275 HERV-K104P63124 156 aa12.61□□□□□ -0.39
R3HCC1-210ENST00000625275 TTTY13Q9BZ97 58 aa12.61□□□□□ -0.39
R3HCC1-210ENST00000625275 PKHD1L1Q86WI1 4243 aa12.6□□□□□ -0.39
R3HCC1-210ENST00000625275 PTTG1IPP53801 180 aa12.6□□□□□ -0.39
R3HCC1-210ENST00000625275 GAGE2BQ13066 116 aa12.6□□□□□ -0.39
R3HCC1-210ENST00000625275 PFN2P35080 140 aa12.59□□□□□ -0.39
R3HCC1-210ENST00000625275 HNRNPA3P51991 378 aaKnown RBP12.59□□□□□ -0.39
R3HCC1-210ENST00000625275 GAGE2EQ4V326 116 aa12.59□□□□□ -0.39
R3HCC1-210ENST00000625275 SPACA4Q8TDM5 124 aa12.59□□□□□ -0.39
R3HCC1-210ENST00000625275 GAGE2DQ9UEU5 116 aa12.59□□□□□ -0.39
R3HCC1-210ENST00000625275 ZNF815PA8K554 130 aa12.58□□□□□ -0.4
R3HCC1-210ENST00000625275 COX17Q14061 63 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms