RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 IMUPQ9GZP8 106 aa11.48□□□□□ -0.57
GABRB3-215ENST00000622697 LINC01546A6NGU7 62 aa11.48□□□□□ -0.57
GABRB3-215ENST00000622697 CHD9Q3L8U1 2897 aa11.48□□□□□ -0.57
GABRB3-215ENST00000622697 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
GABRB3-215ENST00000622697 FAM236DA0A1B0GTK5 79 aa11.47□□□□□ -0.57
GABRB3-215ENST00000622697 FAM236CP0DP71 79 aa11.47□□□□□ -0.57
GABRB3-215ENST00000622697 SERP2Q8N6R1 65 aa11.47□□□□□ -0.57
GABRB3-215ENST00000622697 SHISA2Q6UWI4 295 aa11.47□□□□□ -0.57
GABRB3-215ENST00000622697 WFDC10BQ8IUB3 73 aa11.47□□□□□ -0.57
GABRB3-215ENST00000622697 CSDC2Q9Y534 153 aaKnown RBP11.46□□□□□ -0.57
GABRB3-215ENST00000622697 TRAV10A0A0B4J240 114 aa11.45□□□□□ -0.58
GABRB3-215ENST00000622697 FAM19A4Q96LR4 140 aa11.45□□□□□ -0.58
GABRB3-215ENST00000622697 UNC80Q8N2C7 3258 aa11.45□□□□□ -0.58
GABRB3-215ENST00000622697 TRBV10-3A0A0K0K1G6 114 aa11.45□□□□□ -0.58
GABRB3-215ENST00000622697 Q8N814 137 aa11.45□□□□□ -0.58
GABRB3-215ENST00000622697 C11orf72Q8NBR9 251 aa11.45□□□□□ -0.58
GABRB3-215ENST00000622697 A8MTW9 85 aa11.44□□□□□ -0.58
GABRB3-215ENST00000622697 COX7CP15954 63 aa11.43□□□□□ -0.58
GABRB3-215ENST00000622697 C14orf177Q52M58 125 aa11.43□□□□□ -0.58
GABRB3-215ENST00000622697 COL27A1Q8IZC6 1860 aaPredicted RBP11.43□□□□□ -0.58
GABRB3-215ENST00000622697 BRK1Q8WUW1 75 aa11.43□□□□□ -0.58
GABRB3-215ENST00000622697 CHKB-CPT1BH3BT56 60 aa11.43□□□□□ -0.58
GABRB3-215ENST00000622697 M0R2N4 97 aa11.43□□□□□ -0.58
GABRB3-215ENST00000622697 NTM-AS1Q6ZSK4 140 aa11.43□□□□□ -0.58
GABRB3-215ENST00000622697 ACANP16112 2415 aa11.42□□□□□ -0.58
GABRB3-215ENST00000622697 FAM240AA0A1B0GVK7 77 aa11.41□□□□□ -0.58
GABRB3-215ENST00000622697 Q6ZTC4 211 aa11.41□□□□□ -0.58
GABRB3-215ENST00000622697 LRCOL1A6NCL2 159 aa11.4□□□□□ -0.58
GABRB3-215ENST00000622697 IGKV4-1P06312 121 aa11.4□□□□□ -0.58
GABRB3-215ENST00000622697 LINC00337Q8N6G1 96 aa11.4□□□□□ -0.58
GABRB3-215ENST00000622697 Q6JHZ5 121 aa11.4□□□□□ -0.58
GABRB3-215ENST00000622697 WFDC13Q8IUB5 93 aa11.4□□□□□ -0.59
GABRB3-215ENST00000622697 CDIP1Q9H305 208 aa11.39□□□□□ -0.59
GABRB3-215ENST00000622697 SMCPP49901 116 aaPredicted RBP11.39□□□□□ -0.59
GABRB3-215ENST00000622697 CFAP54Q96N23 3096 aa11.39□□□□□ -0.59
GABRB3-215ENST00000622697 ANKRD17O75179 2603 aaKnown RBP11.38□□□□□ -0.59
GABRB3-215ENST00000622697 Q6Q795 121 aa11.38□□□□□ -0.59
GABRB3-215ENST00000622697 PRR4Q16378 134 aa11.38□□□□□ -0.59
GABRB3-215ENST00000622697 C16orf95Q9H693 158 aa11.38□□□□□ -0.59
GABRB3-215ENST00000622697 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.38□□□□□ -0.59
GABRB3-215ENST00000622697 HRCT1Q6UXD1 115 aa11.37□□□□□ -0.59
GABRB3-215ENST00000622697 Q8N2B8 174 aa11.37□□□□□ -0.59
GABRB3-215ENST00000622697 DHRS4-AS1Q9P1J3 65 aa11.37□□□□□ -0.59
GABRB3-215ENST00000622697 CELA1Q9UNI1 258 aa11.35□□□□□ -0.59
GABRB3-215ENST00000622697 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
GABRB3-215ENST00000622697 NDUFC2O95298 119 aa11.34□□□□□ -0.59
GABRB3-215ENST00000622697 C4orf48Q5BLP8 95 aa11.34□□□□□ -0.59
GABRB3-215ENST00000622697 PRUNE2Q8WUY3 3088 aa11.34□□□□□ -0.59
GABRB3-215ENST00000622697 EGFEM1PQ0D2K5 195 aa11.34□□□□□ -0.59
GABRB3-215ENST00000622697 LOC107984640A0A0U1RRK4 108 aa11.33□□□□□ -0.6
GABRB3-215ENST00000622697 A0A1B0GUV1 79 aa11.33□□□□□ -0.6
GABRB3-215ENST00000622697 IGLV5-39A0A0G2JS06 123 aa11.33□□□□□ -0.6
GABRB3-215ENST00000622697 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
GABRB3-215ENST00000622697 LINC00846Q9NV44 126 aa11.32□□□□□ -0.6
GABRB3-215ENST00000622697 PRO0461Q9UI25 63 aa11.31□□□□□ -0.6
GABRB3-215ENST00000622697 LYPD5Q6UWN5 251 aa11.31□□□□□ -0.6
GABRB3-215ENST00000622697 SPINK6Q6UWN8 80 aa11.3□□□□□ -0.6
GABRB3-215ENST00000622697 IGLV9-49A0A0B4J1Y8 123 aa11.29□□□□□ -0.6
GABRB3-215ENST00000622697 IGHV3OR16-9A0A0B4J2B5 98 aa11.29□□□□□ -0.6
GABRB3-215ENST00000622697 SOSTDC1Q6X4U4 206 aa11.29□□□□□ -0.6
GABRB3-215ENST00000622697 MUC7Q8TAX7 377 aa11.29□□□□□ -0.6
GABRB3-215ENST00000622697 A0A0U1RQV1 116 aa11.27□□□□□ -0.6
GABRB3-215ENST00000622697 XIRP2A4UGR9 3374 aa11.27□□□□□ -0.6
GABRB3-215ENST00000622697 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.61
GABRB3-215ENST00000622697 M0QXV9 152 aa11.27□□□□□ -0.61
GABRB3-215ENST00000622697 FASNP49327 2511 aaKnown RBP11.27□□□□□ -0.61
GABRB3-215ENST00000622697 FAM218AQ96MZ4 157 aa11.26□□□□□ -0.61
GABRB3-215ENST00000622697 PLAC8L1A1L4L8 177 aa11.26□□□□□ -0.61
GABRB3-215ENST00000622697 IL17DQ8TAD2 202 aa11.26□□□□□ -0.61
GABRB3-215ENST00000622697 Q6ZRU5 148 aa11.26□□□□□ -0.61
GABRB3-215ENST00000622697 C1orf137Q5JT78 98 aa11.26□□□□□ -0.61
GABRB3-215ENST00000622697 Q8N3U1 123 aa11.25□□□□□ -0.61
GABRB3-215ENST00000622697 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
GABRB3-215ENST00000622697 CDH23Q9H251 3354 aa11.25□□□□□ -0.61
GABRB3-215ENST00000622697 LINC00575Q6W349 94 aa11.25□□□□□ -0.61
GABRB3-215ENST00000622697 MUC4Q99102 2169 aa11.23□□□□□ -0.61
GABRB3-215ENST00000622697 EPG5Q9HCE0 2579 aa11.22□□□□□ -0.61
GABRB3-215ENST00000622697 TRAV7A0A075B6U4 112 aa11.21□□□□□ -0.61
GABRB3-215ENST00000622697 IGLV5-45A0A087WSX0 123 aa11.21□□□□□ -0.61
GABRB3-215ENST00000622697 NDUFC1O43677 76 aa11.21□□□□□ -0.61
GABRB3-215ENST00000622697 DEFB116Q30KQ4 102 aa11.21□□□□□ -0.62
GABRB3-215ENST00000622697 FHL3Q13643 280 aa11.2□□□□□ -0.62
GABRB3-215ENST00000622697 REG3GQ6UW15 175 aa11.2□□□□□ -0.62
GABRB3-215ENST00000622697 Q6ZVQ6 151 aa11.2□□□□□ -0.62
GABRB3-215ENST00000622697 TRANK1O15050 2925 aa11.19□□□□□ -0.62
GABRB3-215ENST00000622697 C10orf25Q5T742 122 aa11.18□□□□□ -0.62
GABRB3-215ENST00000622697 Q8N9L7 120 aa11.18□□□□□ -0.62
GABRB3-215ENST00000622697 LY6G6CO95867 125 aa11.17□□□□□ -0.62
GABRB3-215ENST00000622697 KLK9Q2XQG4 91 aa11.17□□□□□ -0.62
GABRB3-215ENST00000622697 X6R8D5 127 aa11.16□□□□□ -0.62
GABRB3-215ENST00000622697 LINC01547P58512 204 aaPredicted RBP11.15□□□□□ -0.62
GABRB3-215ENST00000622697 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.62
GABRB3-215ENST00000622697 TRBV7-7A0A0K0K1E9 115 aa11.15□□□□□ -0.62
GABRB3-215ENST00000622697 LITAFQ99732 161 aa11.15□□□□□ -0.63
GABRB3-215ENST00000622697 MRPL55Q7Z7F7 128 aaKnown RBP11.14□□□□□ -0.63
GABRB3-215ENST00000622697 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
GABRB3-215ENST00000622697 ATP5EP56381 51 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-215ENST00000622697 C6orf48Q9UBA6 75 aa11.13□□□□□ -0.63
GABRB3-215ENST00000622697 PRLHP81277 87 aa11.12□□□□□ -0.63
GABRB3-215ENST00000622697 ESRGQ1W209 222 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms