RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TRAV9-1A0A075B6T8 112 aa14.56□□□□□ -0.08
ATXN3-253ENST00000621269 SCGB3A1Q96QR1 104 aa14.56□□□□□ -0.08
ATXN3-253ENST00000621269 LRP2P98164 4655 aa14.55□□□□□ -0.08
ATXN3-253ENST00000621269 TMEM218A2RU14 115 aa14.55□□□□□ -0.08
ATXN3-253ENST00000621269 ADCYAP1P18509 176 aa14.55□□□□□ -0.08
ATXN3-253ENST00000621269 ERASQ7Z444 233 aa14.55□□□□□ -0.08
ATXN3-253ENST00000621269 LINC00469Q8N7U9 141 aa14.55□□□□□ -0.08
ATXN3-253ENST00000621269 PRR26Q8N8Z3 221 aa14.55□□□□□ -0.08
ATXN3-253ENST00000621269 F8VRH5 84 aa14.53□□□□□ -0.08
ATXN3-253ENST00000621269 S100PP25815 95 aa14.53□□□□□ -0.08
ATXN3-253ENST00000621269 GNB1LQ9BYB4 327 aa14.51□□□□□ -0.09
ATXN3-253ENST00000621269 XAGE1AQ9HD64 81 aa14.51□□□□□ -0.09
ATXN3-253ENST00000621269 LINC01549A6NIU2 74 aa14.5□□□□□ -0.09
ATXN3-253ENST00000621269 CXCL5P42830 114 aa14.5□□□□□ -0.09
ATXN3-253ENST00000621269 C22orf24Q9Y442 160 aa14.5□□□□□ -0.09
ATXN3-253ENST00000621269 LBHQ53QV2 105 aaPredicted RBP14.49□□□□□ -0.09
ATXN3-253ENST00000621269 IGLV1-50A0A075B6I6 118 aa14.48□□□□□ -0.09
ATXN3-253ENST00000621269 SEC11CQ9BY50 192 aa14.48□□□□□ -0.09
ATXN3-253ENST00000621269 TINCRA0A1B0GVN0 87 aa14.47□□□□□ -0.09
ATXN3-253ENST00000621269 SMIM1B2RUZ4 78 aa14.46□□□□□ -0.09
ATXN3-253ENST00000621269 PDZD11Q5EBL8 140 aa14.46□□□□□ -0.09
ATXN3-253ENST00000621269 LINC01546A6NGU7 62 aa14.45□□□□□ -0.1
ATXN3-253ENST00000621269 NUPR1O60356 82 aa14.45□□□□□ -0.1
ATXN3-253ENST00000621269 IFITM2Q01629 132 aa14.45□□□□□ -0.1
ATXN3-253ENST00000621269 COX19Q49B96 90 aa14.45□□□□□ -0.1
ATXN3-253ENST00000621269 COX7B2Q8TF08 81 aa14.45□□□□□ -0.1
ATXN3-253ENST00000621269 CST9LQ9H4G1 147 aa14.45□□□□□ -0.1
ATXN3-253ENST00000621269 KRTAP1-4P0C5Y4 121 aa14.44□□□□□ -0.1
ATXN3-253ENST00000621269 FA2HQ7L5A8 372 aa14.44□□□□□ -0.1
ATXN3-253ENST00000621269 SMCO4Q9NRQ5 59 aa14.44□□□□□ -0.1
ATXN3-253ENST00000621269 ZNF861PO60384 105 aa14.43□□□□□ -0.1
ATXN3-253ENST00000621269 IGLV5-45A0A087WSX0 123 aa14.42□□□□□ -0.1
ATXN3-253ENST00000621269 FABP9Q0Z7S8 132 aa14.42□□□□□ -0.1
ATXN3-253ENST00000621269 PMVKQ15126 192 aa14.42□□□□□ -0.1
ATXN3-253ENST00000621269 MRPL18Q9H0U6 180 aaKnown RBP14.42□□□□□ -0.1
ATXN3-253ENST00000621269 TP73-AS1Q9UF72 201 aa14.42□□□□□ -0.1
ATXN3-253ENST00000621269 RNF213Q63HN8 5207 aa14.41□□□□□ -0.1
ATXN3-253ENST00000621269 RPL13AP40429 203 aaKnown RBP14.41□□□□□ -0.1
ATXN3-253ENST00000621269 MRPL55Q7Z7F7 128 aaKnown RBP14.41□□□□□ -0.1
ATXN3-253ENST00000621269 SPINK8P0C7L1 97 aa14.39□□□□□ -0.11
ATXN3-253ENST00000621269 COMMD7Q86VX2 200 aa14.39□□□□□ -0.11
ATXN3-253ENST00000621269 CARHSP1Q9Y2V2 147 aaKnown RBP14.38□□□□□ -0.11
ATXN3-253ENST00000621269 H3BRM9 83 aa14.37□□□□□ -0.11
ATXN3-253ENST00000621269 RAB5BP61020 215 aa14.37□□□□□ -0.11
ATXN3-253ENST00000621269 RPS10P5Q9NQ39 176 aa14.37□□□□□ -0.11
ATXN3-253ENST00000621269 RHEBQ15382 184 aa14.36□□□□□ -0.11
ATXN3-253ENST00000621269 RPL28P46779 137 aaKnown RBP14.35□□□□□ -0.11
ATXN3-253ENST00000621269 BCE1O60756 84 aa14.34□□□□□ -0.11
ATXN3-253ENST00000621269 LINC00167Q96N53 147 aa14.34□□□□□ -0.11
ATXN3-253ENST00000621269 RPL37AP8A6NKH3 93 aa14.33□□□□□ -0.12
ATXN3-253ENST00000621269 ATP5LO75964 103 aa14.33□□□□□ -0.12
ATXN3-253ENST00000621269 NDUFA6P56556 154 aa14.33□□□□□ -0.12
ATXN3-253ENST00000621269 C10orf91Q5T1B1 145 aa14.33□□□□□ -0.12
ATXN3-253ENST00000621269 GAGE10A6NGK3 116 aa14.31□□□□□ -0.12
ATXN3-253ENST00000621269 NKAPP1Q8N9T2 125 aa14.31□□□□□ -0.12
ATXN3-253ENST00000621269 IGLC3P0DOY3 106 aa14.3□□□□□ -0.12
ATXN3-253ENST00000621269 LINC00614P0C842 121 aa14.29□□□□□ -0.12
ATXN3-253ENST00000621269 TRAPPC1Q9Y5R8 145 aa14.29□□□□□ -0.12
ATXN3-253ENST00000621269 IGLV5-37A0A075B6J1 123 aa14.28□□□□□ -0.12
ATXN3-253ENST00000621269 PFN2P35080 140 aa14.27□□□□□ -0.13
ATXN3-253ENST00000621269 A0A096LNJ9 63 aa14.26□□□□□ -0.13
ATXN3-253ENST00000621269 PRR4Q16378 134 aa14.26□□□□□ -0.13
ATXN3-253ENST00000621269 C18orf32Q8TCD1 76 aa14.26□□□□□ -0.13
ATXN3-253ENST00000621269 IGLV5-39A0A0G2JS06 123 aa14.25□□□□□ -0.13
ATXN3-253ENST00000621269 HBDP02042 147 aa14.25□□□□□ -0.13
ATXN3-253ENST00000621269 ZNF22P17026 224 aaPredicted RBP14.24□□□□□ -0.13
ATXN3-253ENST00000621269 URB1-AS1Q96HZ7 61 aa14.24□□□□□ -0.13
ATXN3-253ENST00000621269 LPAP08519 4548 aa14.24□□□□□ -0.13
ATXN3-253ENST00000621269 UBE2AP49459 152 aa14.23□□□□□ -0.13
ATXN3-253ENST00000621269 PMCHL1Q16048 86 aa14.23□□□□□ -0.13
ATXN3-253ENST00000621269 CRYGAP11844 174 aa14.22□□□□□ -0.13
ATXN3-253ENST00000621269 ERG28Q9UKR5 140 aa14.21□□□□□ -0.13
ATXN3-253ENST00000621269 IGKV2-28A0A075B6P5 120 aa14.2□□□□□ -0.14
ATXN3-253ENST00000621269 A0A087X002 238 aa14.2□□□□□ -0.14
ATXN3-253ENST00000621269 IGKV2D-28P01615 120 aa14.2□□□□□ -0.14
ATXN3-253ENST00000621269 BAGE3Q86Y29 109 aa14.2□□□□□ -0.14
ATXN3-253ENST00000621269 TYMSOSQ8TAI1 123 aa14.2□□□□□ -0.14
ATXN3-253ENST00000621269 SCO1O75880 301 aa14.19□□□□□ -0.14
ATXN3-253ENST00000621269 TSPAN13O95857 204 aa14.19□□□□□ -0.14
ATXN3-253ENST00000621269 COX17Q14061 63 aa14.19□□□□□ -0.14
ATXN3-253ENST00000621269 SND1-IT1Q9HBX3 110 aa14.19□□□□□ -0.14
ATXN3-253ENST00000621269 APOC3P02656 99 aa14.18□□□□□ -0.14
ATXN3-253ENST00000621269 TMEM170BQ5T4T1 132 aa14.18□□□□□ -0.14
ATXN3-253ENST00000621269 ZNF625Q96I27 306 aaPredicted RBP14.18□□□□□ -0.14
ATXN3-253ENST00000621269 RPL24P83731 157 aaKnown RBP14.17□□□□□ -0.14
ATXN3-253ENST00000621269 SFTA2Q6UW10 78 aa14.17□□□□□ -0.14
ATXN3-253ENST00000621269 KRTAP13-1Q8IUC0 172 aa14.17□□□□□ -0.14
ATXN3-253ENST00000621269 C11orf86A6NJI1 115 aa14.16□□□□□ -0.14
ATXN3-253ENST00000621269 SNAPINO95295 136 aa14.15□□□□□ -0.14
ATXN3-253ENST00000621269 VPREB1P12018 145 aa14.15□□□□□ -0.14
ATXN3-253ENST00000621269 NDUFA5Q16718 116 aa14.15□□□□□ -0.14
ATXN3-253ENST00000621269 ANAPC11Q9NYG5 84 aa14.15□□□□□ -0.14
ATXN3-253ENST00000621269 SVBPQ8N300 66 aa14.14□□□□□ -0.15
ATXN3-253ENST00000621269 CHTOPQ9Y3Y2 248 aaKnown RBP14.13□□□□□ -0.15
ATXN3-253ENST00000621269 FAM19A1Q7Z5A9 133 aa14.12□□□□□ -0.15
ATXN3-253ENST00000621269 TMEM126AQ9H061 195 aa14.11□□□□□ -0.15
ATXN3-253ENST00000621269 PRLHP81277 87 aa14.1□□□□□ -0.15
ATXN3-253ENST00000621269 FAM229BQ4G0N7 80 aa14.1□□□□□ -0.15
ATXN3-253ENST00000621269 TMEM238C9JI98 176 aa14.09□□□□□ -0.15
ATXN3-253ENST00000621269 LINC00158P58513 81 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms