RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
PCGF3-213ENST00000620529 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
PCGF3-213ENST00000620529 DNAH7Q8WXX0 4024 aa11.07□□□□□ -0.64
PCGF3-213ENST00000620529 TMEM238LA0A1B0GVL6 79 aa11.06□□□□□ -0.64
PCGF3-213ENST00000620529 A6NJY4 79 aa11.06□□□□□ -0.64
PCGF3-213ENST00000620529 KIAA0087Q14695 138 aa11.06□□□□□ -0.64
PCGF3-213ENST00000620529 WWC2-AS2Q96NR7 200 aa11.06□□□□□ -0.64
PCGF3-213ENST00000620529 A0A0U1RRA0 63 aa11.05□□□□□ -0.64
PCGF3-213ENST00000620529 ADAMTSL4-AS1Q5T5F5 129 aa11.05□□□□□ -0.64
PCGF3-213ENST00000620529 C2orf82Q6UX34 121 aa11.05□□□□□ -0.64
PCGF3-213ENST00000620529 CSMD3Q7Z407 3707 aa11.05□□□□□ -0.64
PCGF3-213ENST00000620529 COX11Q9Y6N1 276 aa11.04□□□□□ -0.64
PCGF3-213ENST00000620529 ZNF561-AS1K7EIQ3 104 aa11.04□□□□□ -0.64
PCGF3-213ENST00000620529 SMIM13P0DJ93 91 aa11.04□□□□□ -0.64
PCGF3-213ENST00000620529 RPL24P83731 157 aaKnown RBP11.04□□□□□ -0.64
PCGF3-213ENST00000620529 TTC32Q5I0X7 151 aa11.04□□□□□ -0.64
PCGF3-213ENST00000620529 MUSTN1Q8IVN3 82 aa11.03□□□□□ -0.64
PCGF3-213ENST00000620529 COPS9Q8WXC6 57 aa11.03□□□□□ -0.64
PCGF3-213ENST00000620529 NHP2Q9NX24 153 aaKnown RBP11.03□□□□□ -0.64
PCGF3-213ENST00000620529 IFITM1P13164 125 aa11.02□□□□□ -0.64
PCGF3-213ENST00000620529 LINC00158P58513 81 aa11.02□□□□□ -0.64
PCGF3-213ENST00000620529 DAND5Q8N907 189 aa11.02□□□□□ -0.64
PCGF3-213ENST00000620529 ERG28Q9UKR5 140 aa11.02□□□□□ -0.64
PCGF3-213ENST00000620529 NPC2P61916 151 aa11.02□□□□□ -0.65
PCGF3-213ENST00000620529 HIGD2BQ4VC39 106 aa11.02□□□□□ -0.65
PCGF3-213ENST00000620529 PFN2P35080 140 aa11.01□□□□□ -0.65
PCGF3-213ENST00000620529 C6orf223Q8N319 242 aa11.01□□□□□ -0.65
PCGF3-213ENST00000620529 C15orf56Q8N910 161 aa11.01□□□□□ -0.65
PCGF3-213ENST00000620529 LINC00526Q96FQ7 95 aa11□□□□□ -0.65
PCGF3-213ENST00000620529 KRTAP1-5Q9BYS1 174 aa11□□□□□ -0.65
PCGF3-213ENST00000620529 NTN5Q8WTR8 489 aaPredicted RBP11□□□□□ -0.65
PCGF3-213ENST00000620529 NBDYA0A0U1RRE5 68 aa10.99□□□□□ -0.65
PCGF3-213ENST00000620529 MIR7-3HGQ8N6C7 128 aa10.99□□□□□ -0.65
PCGF3-213ENST00000620529 STARD9Q9P2P6 4700 aa10.99□□□□□ -0.65
PCGF3-213ENST00000620529 A4D1N5 150 aa10.98□□□□□ -0.65
PCGF3-213ENST00000620529 UNQ6190/PRO20217Q6UXQ8 127 aa10.98□□□□□ -0.65
PCGF3-213ENST00000620529 LINC00308Q8TCZ7 52 aa10.98□□□□□ -0.65
PCGF3-213ENST00000620529 CAMK2N2Q96S95 79 aa10.98□□□□□ -0.65
PCGF3-213ENST00000620529 COX17Q14061 63 aa10.98□□□□□ -0.65
PCGF3-213ENST00000620529 GVQW2A0A096LPI5 108 aaPredicted RBP10.97□□□□□ -0.65
PCGF3-213ENST00000620529 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.97□□□□□ -0.65
PCGF3-213ENST00000620529 K7ERJ3 54 aa10.97□□□□□ -0.65
PCGF3-213ENST00000620529 PSCAO43653 123 aa10.97□□□□□ -0.65
PCGF3-213ENST00000620529 RAB37Q96AX2 223 aa10.97□□□□□ -0.65
PCGF3-213ENST00000620529 C2orf48Q96LS8 159 aa10.97□□□□□ -0.65
PCGF3-213ENST00000620529 PLECQ15149 4684 aaKnown RBP10.96□□□□□ -0.65
PCGF3-213ENST00000620529 TAX1BP3O14907 124 aa10.96□□□□□ -0.65
PCGF3-213ENST00000620529 TENM2Q9NT68 2774 aa10.96□□□□□ -0.65
PCGF3-213ENST00000620529 LYSTQ99698 3801 aa10.96□□□□□ -0.66
PCGF3-213ENST00000620529 USP17L23D6RBM5 183 aa10.95□□□□□ -0.66
PCGF3-213ENST00000620529 F8WDY8 70 aa10.95□□□□□ -0.66
PCGF3-213ENST00000620529 C10orf25Q5T742 122 aa10.95□□□□□ -0.66
PCGF3-213ENST00000620529 A0A1B0GWB2 263 aa10.95□□□□□ -0.66
PCGF3-213ENST00000620529 CASC10Q5T4H9 136 aa10.95□□□□□ -0.66
PCGF3-213ENST00000620529 TGP01266 2768 aa10.95□□□□□ -0.66
PCGF3-213ENST00000620529 TRBV30A0A0K0K1B3 111 aa10.94□□□□□ -0.66
PCGF3-213ENST00000620529 C9orf116Q5BN46 136 aaPredicted RBP10.94□□□□□ -0.66
PCGF3-213ENST00000620529 PPDPFQ9H3Y8 114 aa10.94□□□□□ -0.66
PCGF3-213ENST00000620529 C3orf84H3BNL1 204 aa10.93□□□□□ -0.66
PCGF3-213ENST00000620529 CFC1BP0CG36 223 aa10.93□□□□□ -0.66
PCGF3-213ENST00000620529 CFC1P0CG37 223 aa10.93□□□□□ -0.66
PCGF3-213ENST00000620529 SOSTDC1Q6X4U4 206 aa10.93□□□□□ -0.66
PCGF3-213ENST00000620529 C6orf48Q9UBA6 75 aa10.93□□□□□ -0.66
PCGF3-213ENST00000620529 A0A0B4J2C4 111 aa10.92□□□□□ -0.66
PCGF3-213ENST00000620529 EIF4EBP3O60516 100 aaPredicted RBP10.92□□□□□ -0.66
PCGF3-213ENST00000620529 Q6ZRU5 148 aa10.91□□□□□ -0.66
PCGF3-213ENST00000620529 M0R2N4 97 aa10.91□□□□□ -0.66
PCGF3-213ENST00000620529 LECT2O14960 151 aa10.91□□□□□ -0.66
PCGF3-213ENST00000620529 SYCNQ0VAF6 134 aa10.91□□□□□ -0.66
PCGF3-213ENST00000620529 C9orf118A6NHY6 69 aa10.9□□□□□ -0.66
PCGF3-213ENST00000620529 LY6G6CO95867 125 aa10.9□□□□□ -0.66
PCGF3-213ENST00000620529 PRO1854Q9UHT4 67 aa10.9□□□□□ -0.66
PCGF3-213ENST00000620529 PCP4P48539 62 aa10.89□□□□□ -0.67
PCGF3-213ENST00000620529 SND1-IT1Q9HBX3 110 aa10.89□□□□□ -0.67
PCGF3-213ENST00000620529 H3BUT2 72 aa10.89□□□□□ -0.67
PCGF3-213ENST00000620529 CARD19Q96LW7 228 aa10.89□□□□□ -0.67
PCGF3-213ENST00000620529 DNAH1Q9P2D7 4330 aa10.88□□□□□ -0.67
PCGF3-213ENST00000620529 PGPEP1Q9NXJ5 209 aa10.88□□□□□ -0.67
PCGF3-213ENST00000620529 NAA38Q9BRA0 125 aaKnown RBP10.87□□□□□ -0.67
PCGF3-213ENST00000620529 C14orf177Q52M58 125 aa10.87□□□□□ -0.67
PCGF3-213ENST00000620529 LINC00476Q8WZB0 136 aa10.86□□□□□ -0.67
PCGF3-213ENST00000620529 LOC107984156A0A0G2JMH3 177 aa10.85□□□□□ -0.67
PCGF3-213ENST00000620529 ARL17AQ8IVW1 177 aa10.85□□□□□ -0.67
PCGF3-213ENST00000620529 TSPAN13O95857 204 aa10.85□□□□□ -0.67
PCGF3-213ENST00000620529 Q1RN00 199 aa10.85□□□□□ -0.67
PCGF3-213ENST00000620529 VPS13DQ5THJ4 4388 aa10.84□□□□□ -0.67
PCGF3-213ENST00000620529 NDUFC2-KCTD14E9PQ53 114 aa10.84□□□□□ -0.67
PCGF3-213ENST00000620529 WFDC2Q14508 124 aa10.84□□□□□ -0.67
PCGF3-213ENST00000620529 VAMP3Q15836 100 aa10.84□□□□□ -0.67
PCGF3-213ENST00000620529 RNF151Q2KHN1 245 aa10.84□□□□□ -0.67
PCGF3-213ENST00000620529 H7C2G1 150 aa10.83□□□□□ -0.68
PCGF3-213ENST00000620529 Q6ZR54 194 aa10.83□□□□□ -0.68
PCGF3-213ENST00000620529 TRAV13-2A0A0B4J235 113 aa10.83□□□□□ -0.68
PCGF3-213ENST00000620529 A0A1W2PPM0 123 aa10.83□□□□□ -0.68
PCGF3-213ENST00000620529 RPL13AP40429 203 aaKnown RBP10.83□□□□□ -0.68
PCGF3-213ENST00000620529 Q6ZRN7 208 aaPredicted RBP10.83□□□□□ -0.68
PCGF3-213ENST00000620529 SLPIP03973 132 aa10.82□□□□□ -0.68
PCGF3-213ENST00000620529 FABP2P12104 132 aa10.82□□□□□ -0.68
PCGF3-213ENST00000620529 NDUFC2O95298 119 aa10.81□□□□□ -0.68
PCGF3-213ENST00000620529 PSMB2P49721 201 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms