RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 C16orf95Q9H693 158 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 NDUFC1O43677 76 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 Q8N814 137 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 IGHV6-1A0A0B4J1U7 121 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 A6NED7 52 aa5.92□□□□□ -1.46
ALMS1-208ENST00000620466 OTOGLQ3ZCN5 2332 aa5.91□□□□□ -1.46
ALMS1-208ENST00000620466 CEP350Q5VT06 3117 aa5.91□□□□□ -1.46
ALMS1-208ENST00000620466 C1orf134Q5TEV5 83 aa5.91□□□□□ -1.46
ALMS1-208ENST00000620466 PCNTO95613 3336 aa5.91□□□□□ -1.46
ALMS1-208ENST00000620466 X6R8D5 127 aa5.9□□□□□ -1.46
ALMS1-208ENST00000620466 Q6ZTC4 211 aa5.9□□□□□ -1.46
ALMS1-208ENST00000620466 SERTAD4-AS1Q5TG53 156 aa5.9□□□□□ -1.47
ALMS1-208ENST00000620466 UNQ6190/PRO20217Q6UXQ8 127 aa5.9□□□□□ -1.47
ALMS1-208ENST00000620466 KLK9Q2XQG4 91 aa5.89□□□□□ -1.47
ALMS1-208ENST00000620466 MUC7Q8TAX7 377 aa5.89□□□□□ -1.47
ALMS1-208ENST00000620466 A0A087WVE0 104 aa5.89□□□□□ -1.47
ALMS1-208ENST00000620466 IGLV5-39A0A0G2JS06 123 aa5.89□□□□□ -1.47
ALMS1-208ENST00000620466 FSHBP01225 129 aa5.89□□□□□ -1.47
ALMS1-208ENST00000620466 Q9BRP9 147 aa5.89□□□□□ -1.47
ALMS1-208ENST00000620466 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.89□□□□□ -1.471e-8■■■□□ 18.3
ALMS1-208ENST00000620466 TRBV10-3A0A0K0K1G6 114 aa5.88□□□□□ -1.47
ALMS1-208ENST00000620466 CELA1Q9UNI1 258 aa5.88□□□□□ -1.47
ALMS1-208ENST00000620466 EGFEM1PQ0D2K5 195 aa5.88□□□□□ -1.47
ALMS1-208ENST00000620466 Q8N2B8 174 aa5.88□□□□□ -1.47
ALMS1-208ENST00000620466 LINC00337Q8N6G1 96 aa5.88□□□□□ -1.47
ALMS1-208ENST00000620466 SPTAN1Q13813 2472 aaKnown RBP5.88□□□□□ -1.47
ALMS1-208ENST00000620466 WDR87Q6ZQQ6 2873 aa5.88□□□□□ -1.47
ALMS1-208ENST00000620466 NTM-AS1Q6ZSK4 140 aa5.87□□□□□ -1.47
ALMS1-208ENST00000620466 Q9UF83 564 aa5.87□□□□□ -1.47
ALMS1-208ENST00000620466 PRYO14603 147 aa5.86□□□□□ -1.47
ALMS1-208ENST00000620466 SBSPONQ8IVN8 264 aa5.86□□□□□ -1.47
ALMS1-208ENST00000620466 A0A1B0GUV1 79 aa5.85□□□□□ -1.47
ALMS1-208ENST00000620466 IGLV5-45A0A087WSX0 123 aa5.85□□□□□ -1.47
ALMS1-208ENST00000620466 TRBV7-7A0A0K0K1E9 115 aa5.85□□□□□ -1.47
ALMS1-208ENST00000620466 F8WDY8 70 aa5.85□□□□□ -1.47
ALMS1-208ENST00000620466 LYPD5Q6UWN5 251 aa5.84□□□□□ -1.47
ALMS1-208ENST00000620466 MUC6Q6W4X9 2439 aa5.84□□□□□ -1.47
ALMS1-208ENST00000620466 LINC00846Q9NV44 126 aa5.84□□□□□ -1.47
ALMS1-208ENST00000620466 C5orf42Q9H799 3197 aa5.84□□□□□ -1.47
ALMS1-208ENST00000620466 SOSTDC1Q6X4U4 206 aa5.84□□□□□ -1.48
ALMS1-208ENST00000620466 LINC01561Q8N1V8 128 aa5.84□□□□□ -1.48
ALMS1-208ENST00000620466 LIMD2Q9BT23 127 aa5.84□□□□□ -1.48
ALMS1-208ENST00000620466 TRBV7-6A0A0J9YX20 115 aa5.83□□□□□ -1.48
ALMS1-208ENST00000620466 FAM218AQ96MZ4 157 aa5.83□□□□□ -1.48
ALMS1-208ENST00000620466 PTPRQQ9UMZ3 2332 aa5.83□□□□□ -1.48
ALMS1-208ENST00000620466 SPINK1P00995 79 aa5.83□□□□□ -1.48
ALMS1-208ENST00000620466 PCOTHQ58A44 107 aa5.83□□□□□ -1.48
ALMS1-208ENST00000620466 DEFB116Q30KQ4 102 aa5.83□□□□□ -1.48
ALMS1-208ENST00000620466 LINC00208Q96KT6 92 aa5.82□□□□□ -1.48
ALMS1-208ENST00000620466 LITAFQ99732 161 aa5.82□□□□□ -1.48
ALMS1-208ENST00000620466 A8MTW9 85 aa5.82□□□□□ -1.48
ALMS1-208ENST00000620466 LINC00575Q6W349 94 aa5.82□□□□□ -1.48
ALMS1-208ENST00000620466 NHLRC4P0CG21 123 aaPredicted RBP5.82□□□□□ -1.48
ALMS1-208ENST00000620466 C2orf48Q96LS8 159 aa5.82□□□□□ -1.48
ALMS1-208ENST00000620466 HTTP42858 3142 aa5.82□□□□□ -1.48
ALMS1-208ENST00000620466 TRAV7A0A075B6U4 112 aa5.81□□□□□ -1.48
ALMS1-208ENST00000620466 LINC01547P58512 204 aaPredicted RBP5.81□□□□□ -1.48
ALMS1-208ENST00000620466 H0Y9P7 68 aa5.81□□□□□ -1.48
ALMS1-208ENST00000620466 IGHV3OR16-9A0A0B4J2B5 98 aa5.81□□□□□ -1.48
ALMS1-208ENST00000620466 FHL3Q13643 280 aa5.8□□□□□ -1.48
ALMS1-208ENST00000620466 PLA2G1BP04054 148 aaKnown RBP5.8□□□□□ -1.48
ALMS1-208ENST00000620466 DOPEY2Q9Y3R5 2298 aa5.8□□□□□ -1.48
ALMS1-208ENST00000620466 TMEM254Q8TBM7 123 aa5.79□□□□□ -1.48
ALMS1-208ENST00000620466 PRLHP81277 87 aa5.79□□□□□ -1.48
ALMS1-208ENST00000620466 PMAIP1Q13794 54 aa5.79□□□□□ -1.48
ALMS1-208ENST00000620466 Q6ZRU5 148 aa5.79□□□□□ -1.48
ALMS1-208ENST00000620466 HCG22E2RYF7 251 aa5.79□□□□□ -1.48
ALMS1-208ENST00000620466 MDFIQ99750 246 aa5.79□□□□□ -1.48
ALMS1-208ENST00000620466 C7orf65Q6ZTY9 151 aa5.78□□□□□ -1.48
ALMS1-208ENST00000620466 A0A087WSZ3 146 aa5.78□□□□□ -1.48
ALMS1-208ENST00000620466 CHD7Q9P2D1 2997 aa5.78□□□□□ -1.48
ALMS1-208ENST00000620466 TTC28Q96AY4 2481 aa5.77□□□□□ -1.49
ALMS1-208ENST00000620466 C22orf24Q9Y442 160 aa5.77□□□□□ -1.49
ALMS1-208ENST00000620466 Q8N3U1 123 aa5.77□□□□□ -1.49
ALMS1-208ENST00000620466 PIEZO2Q9H5I5 2752 aa5.76□□□□□ -1.49
ALMS1-208ENST00000620466 SMCR5Q8TEV8 140 aa5.76□□□□□ -1.49
ALMS1-208ENST00000620466 C4orf26Q17RF5 130 aa5.76□□□□□ -1.49
ALMS1-208ENST00000620466 AGRNO00468 2067 aa5.76□□□□□ -1.49
ALMS1-208ENST00000620466 CRYGAP11844 174 aa5.76□□□□□ -1.49
ALMS1-208ENST00000620466 NOTCH3Q9UM47 2321 aa5.75□□□□□ -1.49
ALMS1-208ENST00000620466 CREBBPQ92793 2442 aa5.75□□□□□ -1.49
ALMS1-208ENST00000620466 PRRC2AP48634 2157 aaKnown RBP5.74□□□□□ -1.49
ALMS1-208ENST00000620466 IGKV2D-30A0A075B6S6 120 aa5.74□□□□□ -1.49
ALMS1-208ENST00000620466 SMIM26A0A096LP01 95 aa5.74□□□□□ -1.49
ALMS1-208ENST00000620466 IGKV2-30P06310 120 aa5.74□□□□□ -1.49
ALMS1-208ENST00000620466 ZNF575Q86XF7 245 aa5.73□□□□□ -1.49
ALMS1-208ENST00000620466 SPACA4Q8TDM5 124 aa5.73□□□□□ -1.49
ALMS1-208ENST00000620466 CXCL6P80162 114 aa5.73□□□□□ -1.49
ALMS1-208ENST00000620466 BRCA2P51587 3418 aa5.72□□□□□ -1.49
ALMS1-208ENST00000620466 MOBPQ13875 183 aa5.72□□□□□ -1.49
ALMS1-208ENST00000620466 C6orf48Q9UBA6 75 aa5.72□□□□□ -1.49
ALMS1-208ENST00000620466 PSPHP1O15172 72 aa5.72□□□□□ -1.49
ALMS1-208ENST00000620466 SPATA3Q8NHX4 192 aa5.72□□□□□ -1.49
ALMS1-208ENST00000620466 EIF4EBP3O60516 100 aaPredicted RBP5.72□□□□□ -1.49
ALMS1-208ENST00000620466 FAM208BQ5VWN6 2430 aa5.72□□□□□ -1.49
ALMS1-208ENST00000620466 KIAA0087Q14695 138 aa5.71□□□□□ -1.49
ALMS1-208ENST00000620466 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.5
ALMS1-208ENST00000620466 FAM229AH3BQW9 127 aa5.71□□□□□ -1.5
ALMS1-208ENST00000620466 CHTF8P0CG12 524 aa5.7□□□□□ -1.5
ALMS1-208ENST00000620466 RTL8CO15255 209 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms