RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 KPRPQ5T749 579 aaPredicted RBP12.11□□□□□ -0.47
CNOT3-209ENST00000617930 C2orf82Q6UX34 121 aa12.11□□□□□ -0.47
CNOT3-209ENST00000617930 UBE2WQ96B02 151 aa12.11□□□□□ -0.47
CNOT3-209ENST00000617930 CLEC2BQ92478 149 aa12.1□□□□□ -0.47
CNOT3-209ENST00000617930 ZNF625Q96I27 306 aaPredicted RBP12.1□□□□□ -0.47
CNOT3-209ENST00000617930 TRAV26-1A0A087WT03 109 aa12.1□□□□□ -0.47
CNOT3-209ENST00000617930 IGKV3OR2-268A0A0C4DH90 116 aa12.09□□□□□ -0.47
CNOT3-209ENST00000617930 A0A0U1RRA0 63 aa12.09□□□□□ -0.47
CNOT3-209ENST00000617930 SPART-AS1P0CW21 52 aa12.09□□□□□ -0.47
CNOT3-209ENST00000617930 MEIG1Q5JSS6 88 aa12.09□□□□□ -0.47
CNOT3-209ENST00000617930 LINC00308Q8TCZ7 52 aa12.09□□□□□ -0.47
CNOT3-209ENST00000617930 COPS9Q8WXC6 57 aa12.09□□□□□ -0.47
CNOT3-209ENST00000617930 LINC01600Q96MT4 127 aa12.09□□□□□ -0.47
CNOT3-209ENST00000617930 DNAH9Q9NYC9 4486 aa12.08□□□□□ -0.48
CNOT3-209ENST00000617930 TEX49A0A1B0GTD5 131 aa12.08□□□□□ -0.48
CNOT3-209ENST00000617930 H3BT86 120 aa12.08□□□□□ -0.48
CNOT3-209ENST00000617930 ATP5G1P05496 136 aa12.08□□□□□ -0.48
CNOT3-209ENST00000617930 Q8N3U1 123 aa12.08□□□□□ -0.48
CNOT3-209ENST00000617930 LST1O00453 97 aa12.07□□□□□ -0.48
CNOT3-209ENST00000617930 TRAV8-4A0A0B4J246 113 aa12.06□□□□□ -0.48
CNOT3-209ENST00000617930 HTN3P15516 51 aa12.05□□□□□ -0.48
CNOT3-209ENST00000617930 IGHV3OR16-9A0A0B4J2B5 98 aa12.04□□□□□ -0.48
CNOT3-209ENST00000617930 LINC00959A0A1B0GUT2 108 aa12.03□□□□□ -0.48
CNOT3-209ENST00000617930 A0A1B0GUV1 79 aa12.03□□□□□ -0.48
CNOT3-209ENST00000617930 HERV-K104P63124 156 aa12.03□□□□□ -0.48
CNOT3-209ENST00000617930 SNCGO76070 127 aa12.03□□□□□ -0.48
CNOT3-209ENST00000617930 SOSTDC1Q6X4U4 206 aa12.01□□□□□ -0.49
CNOT3-209ENST00000617930 CLPSL2Q6UWE3 100 aa12.01□□□□□ -0.49
CNOT3-209ENST00000617930 MRAPQ8TCY5 172 aa12□□□□□ -0.49
CNOT3-209ENST00000617930 COX7A2LO14548 114 aa11.99□□□□□ -0.49
CNOT3-209ENST00000617930 C5orf38Q86SI9 138 aa11.99□□□□□ -0.49
CNOT3-209ENST00000617930 DEFB121Q5J5C9 76 aa11.99□□□□□ -0.49
CNOT3-209ENST00000617930 COL7A1Q02388 2944 aa11.98□□□□□ -0.49
CNOT3-209ENST00000617930 A0A087WZ39 114 aa11.98□□□□□ -0.49
CNOT3-209ENST00000617930 TM2D3Q9BRN9 247 aa11.98□□□□□ -0.49
CNOT3-209ENST00000617930 A0A0J9YWU9 116 aa11.97□□□□□ -0.49
CNOT3-209ENST00000617930 MRPL23Q16540 153 aaKnown RBP11.97□□□□□ -0.49
CNOT3-209ENST00000617930 LINC00269Q8N2A0 174 aa11.97□□□□□ -0.49
CNOT3-209ENST00000617930 COX7B2Q8TF08 81 aa11.97□□□□□ -0.49
CNOT3-209ENST00000617930 XCL1P47992 114 aa11.96□□□□□ -0.49
CNOT3-209ENST00000617930 Q6ZTC4 211 aa11.96□□□□□ -0.49
CNOT3-209ENST00000617930 PRKDCP78527 4128 aaKnown RBP11.96□□□□□ -0.5
CNOT3-209ENST00000617930 GAGE2BQ13066 116 aa11.96□□□□□ -0.5
CNOT3-209ENST00000617930 GAGE2EQ4V326 116 aa11.96□□□□□ -0.5
CNOT3-209ENST00000617930 ANAPC13Q9BS18 74 aa11.96□□□□□ -0.5
CNOT3-209ENST00000617930 TOMM7Q9P0U1 55 aa11.96□□□□□ -0.5
CNOT3-209ENST00000617930 GAGE2DQ9UEU5 116 aa11.96□□□□□ -0.5
CNOT3-209ENST00000617930 C11orf68Q9H3H3 251 aaKnown RBP11.95□□□□□ -0.5
CNOT3-209ENST00000617930 C15orf53Q8NAA6 179 aa11.94□□□□□ -0.5
CNOT3-209ENST00000617930 PPDPFQ9H3Y8 114 aa11.94□□□□□ -0.5
CNOT3-209ENST00000617930 LELP1Q5T871 98 aa11.93□□□□□ -0.5
CNOT3-209ENST00000617930 LYPD5Q6UWN5 251 aa11.93□□□□□ -0.5
CNOT3-209ENST00000617930 CRPP02741 224 aa11.92□□□□□ -0.5
CNOT3-209ENST00000617930 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
CNOT3-209ENST00000617930 FAM240AA0A1B0GVK7 77 aa11.91□□□□□ -0.5
CNOT3-209ENST00000617930 ANGP03950 147 aaKnown RBP11.91□□□□□ -0.5
CNOT3-209ENST00000617930 SS18Q15532 418 aa11.91□□□□□ -0.5
CNOT3-209ENST00000617930 MIR7-3HGQ8N6C7 128 aa11.91□□□□□ -0.5
CNOT3-209ENST00000617930 IGLV10-54A0A075B6I4 117 aa11.91□□□□□ -0.5
CNOT3-209ENST00000617930 NANOS2P60321 138 aaKnown RBP11.91□□□□□ -0.5
CNOT3-209ENST00000617930 REG3AQ06141 175 aa11.91□□□□□ -0.5
CNOT3-209ENST00000617930 TRACP01848 142 aa11.9□□□□□ -0.5
CNOT3-209ENST00000617930 TTC32Q5I0X7 151 aa11.9□□□□□ -0.5
CNOT3-209ENST00000617930 LINC00158P58513 81 aa11.89□□□□□ -0.51
CNOT3-209ENST00000617930 Q6Q795 121 aa11.89□□□□□ -0.51
CNOT3-209ENST00000617930 MEGF8Q7Z7M0 2845 aa11.89□□□□□ -0.51
CNOT3-209ENST00000617930 SND1-IT1Q9HBX3 110 aa11.89□□□□□ -0.51
CNOT3-209ENST00000617930 CHCHD10Q8WYQ3 142 aaPredicted RBP11.88□□□□□ -0.51
CNOT3-209ENST00000617930 STAB2Q8WWQ8 2551 aa11.87□□□□□ -0.51
CNOT3-209ENST00000617930 NDUFV3P56181 108 aaKnown RBP11.86□□□□□ -0.51
CNOT3-209ENST00000617930 CD164L2Q6UWJ8 174 aa11.86□□□□□ -0.51
CNOT3-209ENST00000617930 H3BNG1 76 aa11.86□□□□□ -0.51
CNOT3-209ENST00000617930 RPL28P46779 137 aaKnown RBP11.86□□□□□ -0.51
CNOT3-209ENST00000617930 KIAA0087Q14695 138 aa11.86□□□□□ -0.51
CNOT3-209ENST00000617930 FAM218AQ96MZ4 157 aa11.86□□□□□ -0.51
CNOT3-209ENST00000617930 BAALC-AS2P0C853 105 aa11.85□□□□□ -0.51
CNOT3-209ENST00000617930 KRTAP21-3Q3LHN1 58 aa11.85□□□□□ -0.51
CNOT3-209ENST00000617930 ENHOQ6UWT2 76 aa11.85□□□□□ -0.51
CNOT3-209ENST00000617930 WFDC10BQ8IUB3 73 aa11.85□□□□□ -0.51
CNOT3-209ENST00000617930 LINC00337Q8N6G1 96 aa11.85□□□□□ -0.51
CNOT3-209ENST00000617930 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
CNOT3-209ENST00000617930 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
CNOT3-209ENST00000617930 IBA57-AS1B1ANH7 110 aa11.84□□□□□ -0.51
CNOT3-209ENST00000617930 ACYP1P07311 99 aa11.84□□□□□ -0.51
CNOT3-209ENST00000617930 C11orf45Q8TAV5 145 aa11.84□□□□□ -0.51
CNOT3-209ENST00000617930 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.52
CNOT3-209ENST00000617930 IGKV2D-28P01615 120 aa11.83□□□□□ -0.52
CNOT3-209ENST00000617930 PFN2P35080 140 aa11.83□□□□□ -0.52
CNOT3-209ENST00000617930 ESRGQ1W209 222 aa11.83□□□□□ -0.52
CNOT3-209ENST00000617930 C6orf226Q5I0X4 101 aa11.83□□□□□ -0.52
CNOT3-209ENST00000617930 Q8IZM0 81 aa11.82□□□□□ -0.52
CNOT3-209ENST00000617930 CCL18P55774 89 aa11.82□□□□□ -0.52
CNOT3-209ENST00000617930 LINC01561Q8N1V8 128 aa11.82□□□□□ -0.52
CNOT3-209ENST00000617930 DEFB131BA0A096LNP1 70 aa11.81□□□□□ -0.52
CNOT3-209ENST00000617930 NHLRC4P0CG21 123 aaPredicted RBP11.81□□□□□ -0.52
CNOT3-209ENST00000617930 B9D2Q9BPU9 175 aa11.81□□□□□ -0.52
CNOT3-209ENST00000617930 Q9HAA7 133 aa11.81□□□□□ -0.52
CNOT3-209ENST00000617930 DNAL4O96015 105 aa11.8□□□□□ -0.52
CNOT3-209ENST00000617930 SMIM11BQ8TCY0 68 aa11.8□□□□□ -0.52
CNOT3-209ENST00000617930 MALP21145 153 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms