RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 DAND5Q8N907 189 aa13.83□□□□□ -0.19
SDHA-220ENST00000617470 PRSS2P07478 247 aa13.83□□□□□ -0.2
SDHA-220ENST00000617470 CHCHD10Q8WYQ3 142 aaPredicted RBP13.83□□□□□ -0.2
SDHA-220ENST00000617470 TOMM7Q9P0U1 55 aa13.83□□□□□ -0.2
SDHA-220ENST00000617470 IGLV10-54A0A075B6I4 117 aa13.82□□□□□ -0.2
SDHA-220ENST00000617470 RPL24P83731 157 aaKnown RBP13.82□□□□□ -0.2
SDHA-220ENST00000617470 CD164L2Q6UWJ8 174 aa13.82□□□□□ -0.2
SDHA-220ENST00000617470 PRR34Q9NV39 138 aa13.82□□□□□ -0.2
SDHA-220ENST00000617470 FABP2P12104 132 aa13.81□□□□□ -0.2
SDHA-220ENST00000617470 HERV-K104P63124 156 aa13.81□□□□□ -0.2
SDHA-220ENST00000617470 PGPEP1Q9NXJ5 209 aa13.81□□□□□ -0.2
SDHA-220ENST00000617470 KLK12Q9UKR0 248 aa13.81□□□□□ -0.2
SDHA-220ENST00000617470 NPC2P61916 151 aa13.8□□□□□ -0.2
SDHA-220ENST00000617470 IGHV3-33P01772 117 aa13.8□□□□□ -0.2
SDHA-220ENST00000617470 ENHOQ6UWT2 76 aa13.8□□□□□ -0.2
SDHA-220ENST00000617470 LINC01561Q8N1V8 128 aa13.8□□□□□ -0.2
SDHA-220ENST00000617470 LINC00476Q8WZB0 136 aa13.8□□□□□ -0.2
SDHA-220ENST00000617470 UPK3BQ9BT76 320 aa13.8□□□□□ -0.2
SDHA-220ENST00000617470 SPCS1Q9Y6A9 102 aa13.8□□□□□ -0.2
SDHA-220ENST00000617470 A0A0U1RRA0 63 aa13.79□□□□□ -0.2
SDHA-220ENST00000617470 TSPAN13O95857 204 aa13.79□□□□□ -0.2
SDHA-220ENST00000617470 CIRBPQ14011 172 aaKnown RBP13.79□□□□□ -0.2
SDHA-220ENST00000617470 FOXI1Q12951 378 aa13.78□□□□□ -0.2
SDHA-220ENST00000617470 A0A0B4J2C4 111 aa13.76□□□□□ -0.21
SDHA-220ENST00000617470 COX7A2LO14548 114 aa13.76□□□□□ -0.21
SDHA-220ENST00000617470 IFITM1P13164 125 aa13.76□□□□□ -0.21
SDHA-220ENST00000617470 MEIG1Q5JSS6 88 aa13.76□□□□□ -0.21
SDHA-220ENST00000617470 SOSTDC1Q6X4U4 206 aa13.76□□□□□ -0.21
SDHA-220ENST00000617470 PRO1854Q9UHT4 67 aa13.76□□□□□ -0.21
SDHA-220ENST00000617470 LINC00308Q8TCZ7 52 aa13.76□□□□□ -0.21
SDHA-220ENST00000617470 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.75□□□□□ -0.21
SDHA-220ENST00000617470 KIAA0087Q14695 138 aa13.74□□□□□ -0.21
SDHA-220ENST00000617470 Q8IZM0 81 aa13.74□□□□□ -0.21
SDHA-220ENST00000617470 GAGE12HA6NDE8 117 aa13.73□□□□□ -0.21
SDHA-220ENST00000617470 C6orf226Q5I0X4 101 aa13.73□□□□□ -0.21
SDHA-220ENST00000617470 DNAH10OSP0CZ25 163 aa13.72□□□□□ -0.21
SDHA-220ENST00000617470 LINC01556Q5JQF7 62 aa13.72□□□□□ -0.21
SDHA-220ENST00000617470 C2orf82Q6UX34 121 aa13.71□□□□□ -0.21
SDHA-220ENST00000617470 UBE2WQ96B02 151 aa13.71□□□□□ -0.21
SDHA-220ENST00000617470 ALMS1Q8TCU4 4167 aa13.71□□□□□ -0.22
SDHA-220ENST00000617470 VPS13DQ5THJ4 4388 aa13.71□□□□□ -0.22
SDHA-220ENST00000617470 SFTA2Q6UW10 78 aa13.71□□□□□ -0.22
SDHA-220ENST00000617470 M0R2N4 97 aa13.7□□□□□ -0.22
SDHA-220ENST00000617470 OCIAD2Q56VL3 154 aa13.7□□□□□ -0.22
SDHA-220ENST00000617470 IBA57-AS1B1ANH7 110 aa13.69□□□□□ -0.22
SDHA-220ENST00000617470 MALP21145 153 aa13.69□□□□□ -0.22
SDHA-220ENST00000617470 MIR7-3HGQ8N6C7 128 aa13.69□□□□□ -0.22
SDHA-220ENST00000617470 DNAH1Q9P2D7 4330 aa13.68□□□□□ -0.22
SDHA-220ENST00000617470 LCE6AA0A183 80 aa13.68□□□□□ -0.22
SDHA-220ENST00000617470 KRTAP26-1Q6PEX3 210 aa13.68□□□□□ -0.22
SDHA-220ENST00000617470 TRAV8-4A0A0B4J246 113 aa13.67□□□□□ -0.22
SDHA-220ENST00000617470 CRPP02741 224 aa13.67□□□□□ -0.22
SDHA-220ENST00000617470 ERG28Q9UKR5 140 aa13.67□□□□□ -0.22
SDHA-220ENST00000617470 NBDYA0A0U1RRE5 68 aa13.67□□□□□ -0.22
SDHA-220ENST00000617470 PPDPFQ9H3Y8 114 aa13.67□□□□□ -0.22
SDHA-220ENST00000617470 H7C2G1 150 aa13.66□□□□□ -0.22
SDHA-220ENST00000617470 LINC00158P58513 81 aa13.66□□□□□ -0.22
SDHA-220ENST00000617470 LOC107984156A0A0G2JMH3 177 aa13.65□□□□□ -0.22
SDHA-220ENST00000617470 TTC32Q5I0X7 151 aa13.65□□□□□ -0.22
SDHA-220ENST00000617470 ARL17AQ8IVW1 177 aa13.65□□□□□ -0.22
SDHA-220ENST00000617470 PFN2P35080 140 aa13.65□□□□□ -0.22
SDHA-220ENST00000617470 KRTAP1-5Q9BYS1 174 aa13.65□□□□□ -0.22
SDHA-220ENST00000617470 CKS1BP61024 79 aa13.64□□□□□ -0.23
SDHA-220ENST00000617470 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
SDHA-220ENST00000617470 H3BMG7 143 aa13.63□□□□□ -0.23
SDHA-220ENST00000617470 CFAP161Q6P656 301 aa13.63□□□□□ -0.23
SDHA-220ENST00000617470 Q9HAA7 133 aa13.63□□□□□ -0.23
SDHA-220ENST00000617470 C6orf223Q8N319 242 aa13.62□□□□□ -0.23
SDHA-220ENST00000617470 CXCL5P42830 114 aa13.62□□□□□ -0.23
SDHA-220ENST00000617470 LINC00526Q96FQ7 95 aa13.62□□□□□ -0.23
SDHA-220ENST00000617470 CBY1Q9Y3M2 126 aa13.62□□□□□ -0.23
SDHA-220ENST00000617470 KMT2AQ03164 3969 aa13.61□□□□□ -0.23
SDHA-220ENST00000617470 K7ERU9 68 aa13.61□□□□□ -0.23
SDHA-220ENST00000617470 SPAG11BQ08648 103 aa13.61□□□□□ -0.23
SDHA-220ENST00000617470 RPL13AP40429 203 aaKnown RBP13.6□□□□□ -0.23
SDHA-220ENST00000617470 C10orf25Q5T742 122 aa13.6□□□□□ -0.23
SDHA-220ENST00000617470 Q1RN00 199 aa13.59□□□□□ -0.23
SDHA-220ENST00000617470 TRIAP1O43715 76 aa13.58□□□□□ -0.24
SDHA-220ENST00000617470 TCL1BO95988 128 aa13.58□□□□□ -0.24
SDHA-220ENST00000617470 RNF151Q2KHN1 245 aa13.58□□□□□ -0.24
SDHA-220ENST00000617470 C9orf116Q5BN46 136 aaPredicted RBP13.58□□□□□ -0.24
SDHA-220ENST00000617470 TRBV30A0A0K0K1B3 111 aa13.58□□□□□ -0.24
SDHA-220ENST00000617470 PSMB2P49721 201 aa13.58□□□□□ -0.24
SDHA-220ENST00000617470 UNQ6190/PRO20217Q6UXQ8 127 aa13.58□□□□□ -0.24
SDHA-220ENST00000617470 Q6ZR54 194 aa13.58□□□□□ -0.24
SDHA-220ENST00000617470 PRO0461Q9UI25 63 aa13.58□□□□□ -0.24
SDHA-220ENST00000617470 F8W1H4 67 aa13.57□□□□□ -0.24
SDHA-220ENST00000617470 SND1-IT1Q9HBX3 110 aa13.57□□□□□ -0.24
SDHA-220ENST00000617470 IGKV2-28A0A075B6P5 120 aa13.56□□□□□ -0.24
SDHA-220ENST00000617470 IGKV2D-28P01615 120 aa13.56□□□□□ -0.24
SDHA-220ENST00000617470 LYRM7Q5U5X0 104 aa13.56□□□□□ -0.24
SDHA-220ENST00000617470 SACSQ9NZJ4 4579 aa13.56□□□□□ -0.24
SDHA-220ENST00000617470 SCGB1C2P0DMR2 95 aa13.56□□□□□ -0.24
SDHA-220ENST00000617470 COX17Q14061 63 aa13.55□□□□□ -0.24
SDHA-220ENST00000617470 NTN5Q8WTR8 489 aaPredicted RBP13.55□□□□□ -0.24
SDHA-220ENST00000617470 HYDINQ4G0P3 5121 aa13.55□□□□□ -0.24
SDHA-220ENST00000617470 KMT2CQ8NEZ4 4911 aaKnown RBP13.55□□□□□ -0.24
SDHA-220ENST00000617470 IGKV2D-24A0A075B6R9 120 aa13.54□□□□□ -0.24
SDHA-220ENST00000617470 MTURNQ8N3F0 131 aa13.54□□□□□ -0.24
SDHA-220ENST00000617470 LINC00337Q8N6G1 96 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 156.5 ms