RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 CHCHD7Q9BUK0 85 aa10.28□□□□□ -0.76
SHROOM1-208ENST00000617339 TIRAPP58753 221 aa10.28□□□□□ -0.76
SHROOM1-208ENST00000617339 PAX4O43316 350 aa10.27□□□□□ -0.76
SHROOM1-208ENST00000617339 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.76
SHROOM1-208ENST00000617339 LINC00308Q8TCZ7 52 aa10.27□□□□□ -0.76
SHROOM1-208ENST00000617339 TRACP01848 142 aa10.27□□□□□ -0.77
SHROOM1-208ENST00000617339 COX7A2LO14548 114 aa10.26□□□□□ -0.77
SHROOM1-208ENST00000617339 PIK3CD-AS1Q5SR53 167 aa10.26□□□□□ -0.77
SHROOM1-208ENST00000617339 FAM218AQ96MZ4 157 aa10.26□□□□□ -0.77
SHROOM1-208ENST00000617339 UBE2D4Q9Y2X8 147 aa10.26□□□□□ -0.77
SHROOM1-208ENST00000617339 APOC4P55056 127 aa10.26□□□□□ -0.77
SHROOM1-208ENST00000617339 C1orf43Q9BWL3 253 aa10.26□□□□□ -0.77
SHROOM1-208ENST00000617339 CYSTM1Q9H1C7 97 aa10.26□□□□□ -0.77
SHROOM1-208ENST00000617339 K7EQD1 137 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 LINC01600Q96MT4 127 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 DNAL4O96015 105 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 ACYP1P07311 99 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 LINC00526Q96FQ7 95 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 C16orf74Q96GX8 76 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 RETNQ9HD89 108 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 TINCRA0A1B0GVN0 87 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 SOSTDC1Q6X4U4 206 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 PRIMA1Q86XR5 153 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 KIR2DL5BQ8NHK3 375 aa10.25□□□□□ -0.77
SHROOM1-208ENST00000617339 A0A087WVE0 104 aa10.24□□□□□ -0.77
SHROOM1-208ENST00000617339 HRCT1Q6UXD1 115 aa10.24□□□□□ -0.77
SHROOM1-208ENST00000617339 C5orf38Q86SI9 138 aa10.24□□□□□ -0.77
SHROOM1-208ENST00000617339 TMEM243Q9BU79 118 aa10.24□□□□□ -0.77
SHROOM1-208ENST00000617339 A0A1B0GX51 115 aa10.24□□□□□ -0.77
SHROOM1-208ENST00000617339 DSCR8Q96T75 97 aa10.24□□□□□ -0.77
SHROOM1-208ENST00000617339 COX7CP15954 63 aa10.23□□□□□ -0.77
SHROOM1-208ENST00000617339 IMUPQ9GZP8 106 aa10.23□□□□□ -0.77
SHROOM1-208ENST00000617339 C14orf132Q9NPU4 83 aa10.23□□□□□ -0.77
SHROOM1-208ENST00000617339 XCL1P47992 114 aa10.22□□□□□ -0.77
SHROOM1-208ENST00000617339 PYGO1Q9Y3Y4 419 aa10.22□□□□□ -0.77
SHROOM1-208ENST00000617339 ANGP03950 147 aaKnown RBP10.21□□□□□ -0.77
SHROOM1-208ENST00000617339 C16orf95Q9H693 158 aa10.21□□□□□ -0.77
SHROOM1-208ENST00000617339 C19orf73Q9NVV2 129 aa10.21□□□□□ -0.77
SHROOM1-208ENST00000617339 NDUFA1O15239 70 aa10.2□□□□□ -0.78
SHROOM1-208ENST00000617339 ATP5G1P05496 136 aa10.2□□□□□ -0.78
SHROOM1-208ENST00000617339 PFN2P35080 140 aa10.2□□□□□ -0.78
SHROOM1-208ENST00000617339 BEAN1Q3B7T3 259 aa10.2□□□□□ -0.78
SHROOM1-208ENST00000617339 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
SHROOM1-208ENST00000617339 IGHV4-30-4P0DP06 118 aa10.19□□□□□ -0.78
SHROOM1-208ENST00000617339 MALP21145 153 aa10.19□□□□□ -0.78
SHROOM1-208ENST00000617339 Q8N3U1 123 aa10.19□□□□□ -0.78
SHROOM1-208ENST00000617339 TENM3Q9P273 2699 aa10.19□□□□□ -0.78
SHROOM1-208ENST00000617339 PKIGQ9Y2B9 76 aa10.19□□□□□ -0.78
SHROOM1-208ENST00000617339 IGLV4-60A0A075B6I1 120 aa10.18□□□□□ -0.78
SHROOM1-208ENST00000617339 LINC00158P58513 81 aa10.18□□□□□ -0.78
SHROOM1-208ENST00000617339 KRTAP24-1Q3LI83 254 aa10.17□□□□□ -0.78
SHROOM1-208ENST00000617339 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
SHROOM1-208ENST00000617339 IGHV4-28A0A0C4DH34 117 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 PLAC8L1A1L4L8 177 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 SLPIP03973 132 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 C6orf226Q5I0X4 101 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 C2orf48Q96LS8 159 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 A8MTW9 85 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 ATOX1O00244 68 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 INAFM2P0DMQ5 153 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 C22orf24Q9Y442 160 aa10.16□□□□□ -0.78
SHROOM1-208ENST00000617339 TIMM17BO60830 172 aa10.15□□□□□ -0.78
SHROOM1-208ENST00000617339 SPART-AS1P0CW21 52 aa10.15□□□□□ -0.78
SHROOM1-208ENST00000617339 A0A087WYN8 130 aa10.15□□□□□ -0.79
SHROOM1-208ENST00000617339 CRPP02741 224 aa10.15□□□□□ -0.79
SHROOM1-208ENST00000617339 WFDC9Q8NEX5 89 aa10.15□□□□□ -0.79
SHROOM1-208ENST00000617339 NCR3O14931 201 aa10.14□□□□□ -0.79
SHROOM1-208ENST00000617339 CSNK1G2-AS1Q8NCQ2 148 aa10.14□□□□□ -0.79
SHROOM1-208ENST00000617339 FHL2Q14192 279 aa10.14□□□□□ -0.79
SHROOM1-208ENST00000617339 C4orf26Q17RF5 130 aa10.13□□□□□ -0.79
SHROOM1-208ENST00000617339 LINC00846Q9NV44 126 aa10.13□□□□□ -0.79
SHROOM1-208ENST00000617339 RPL18AQ02543 176 aaKnown RBP10.13□□□□□ -0.79
SHROOM1-208ENST00000617339 SMIM1B2RUZ4 78 aa10.12□□□□□ -0.79
SHROOM1-208ENST00000617339 CXCL5P42830 114 aa10.12□□□□□ -0.79
SHROOM1-208ENST00000617339 CRYGAP11844 174 aa10.12□□□□□ -0.79
SHROOM1-208ENST00000617339 MIR7-3HGQ8N6C7 128 aa10.12□□□□□ -0.79
SHROOM1-208ENST00000617339 CDC42SE2Q9NRR3 84 aa10.12□□□□□ -0.79
SHROOM1-208ENST00000617339 PRO0255Q9UI72 69 aa10.12□□□□□ -0.79
SHROOM1-208ENST00000617339 LECT2O14960 151 aa10.11□□□□□ -0.79
SHROOM1-208ENST00000617339 KLK12Q9UKR0 248 aa10.11□□□□□ -0.79
SHROOM1-208ENST00000617339 LINC00337Q8N6G1 96 aa10.11□□□□□ -0.79
SHROOM1-208ENST00000617339 SND1-IT1Q9HBX3 110 aa10.1□□□□□ -0.79
SHROOM1-208ENST00000617339 CELA1Q9UNI1 258 aa10.1□□□□□ -0.79
SHROOM1-208ENST00000617339 A0A0U1RQV1 116 aa10.09□□□□□ -0.79
SHROOM1-208ENST00000617339 DPH3Q96FX2 82 aa10.09□□□□□ -0.79
SHROOM1-208ENST00000617339 TRBV6-8A0A0A6YYG3 113 aa10.09□□□□□ -0.79
SHROOM1-208ENST00000617339 USP17L23D6RBM5 183 aa10.09□□□□□ -0.79
SHROOM1-208ENST00000617339 OXTP01178 125 aa10.09□□□□□ -0.79
SHROOM1-208ENST00000617339 TRBV10-1A0A0K0K1A3 114 aa10.09□□□□□ -0.79
SHROOM1-208ENST00000617339 SS18Q15532 418 aa10.09□□□□□ -0.79
SHROOM1-208ENST00000617339 SMIM11BQ8TCY0 68 aa10.09□□□□□ -0.79
SHROOM1-208ENST00000617339 COPS9Q8WXC6 57 aa10.08□□□□□ -0.8
SHROOM1-208ENST00000617339 TRAV23DV6A0A075B6W5 121 aa10.08□□□□□ -0.8
SHROOM1-208ENST00000617339 X6R8D5 127 aa10.08□□□□□ -0.8
SHROOM1-208ENST00000617339 SERP2Q8N6R1 65 aa10.07□□□□□ -0.8
SHROOM1-208ENST00000617339 IGLV5-39A0A0G2JS06 123 aa10.07□□□□□ -0.8
SHROOM1-208ENST00000617339 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
SHROOM1-208ENST00000617339 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
SHROOM1-208ENST00000617339 C20orf197Q8N268 126 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms