RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MYMXA0A1B0GTQ4 84 aa11.58□□□□□ -0.56
TRAPPC3-209ENST00000616395 ANGP03950 147 aaKnown RBP11.57□□□□□ -0.56
TRAPPC3-209ENST00000616395 LBHQ53QV2 105 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC3-209ENST00000616395 FAM104AQ969W3 186 aa11.57□□□□□ -0.56
TRAPPC3-209ENST00000616395 Q9HAA7 133 aa11.57□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGLV5-45A0A087WSX0 123 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 ZNF815PA8K554 130 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 J3QQQ9 107 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 CTAG1AP78358 180 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 WFDC2Q14508 124 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 MPV17L2Q567V2 206 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 LINC00242Q5T6M2 205 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 SCGB1D4Q6XE38 83 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 Q8N3U1 123 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 HIGD1BQ9P298 99 aa11.56□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGLV4-60A0A075B6I1 120 aa11.55□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGHV1-58A0A0C4DH39 117 aa11.55□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGKV3OR2-268A0A0C4DH90 116 aa11.55□□□□□ -0.56
TRAPPC3-209ENST00000616395 CRPP02741 224 aa11.55□□□□□ -0.56
TRAPPC3-209ENST00000616395 PCP2Q8IVA1 136 aa11.55□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGKV2D-26A0A0A0MRZ7 120 aa11.54□□□□□ -0.56
TRAPPC3-209ENST00000616395 IBA57-AS1B1ANH7 110 aa11.54□□□□□ -0.56
TRAPPC3-209ENST00000616395 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
TRAPPC3-209ENST00000616395 LINC00959A0A1B0GUT2 108 aa11.53□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGHV3-33P01772 117 aa11.53□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGHV3-30-3P0DP02 117 aa11.53□□□□□ -0.56
TRAPPC3-209ENST00000616395 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
TRAPPC3-209ENST00000616395 HSD52Q0P140 79 aa11.53□□□□□ -0.56
TRAPPC3-209ENST00000616395 CDKN2A-AS1Q9UH64 79 aa11.53□□□□□ -0.56
TRAPPC3-209ENST00000616395 TAL2Q16559 108 aa11.52□□□□□ -0.57
TRAPPC3-209ENST00000616395 MT1HL1P0DM35 61 aa11.51□□□□□ -0.57
TRAPPC3-209ENST00000616395 REG3AQ06141 175 aa11.51□□□□□ -0.57
TRAPPC3-209ENST00000616395 SFTA2Q6UW10 78 aa11.51□□□□□ -0.57
TRAPPC3-209ENST00000616395 LINC01561Q8N1V8 128 aa11.51□□□□□ -0.57
TRAPPC3-209ENST00000616395 LINC00269Q8N2A0 174 aa11.51□□□□□ -0.57
TRAPPC3-209ENST00000616395 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC3-209ENST00000616395 TRAV8-4A0A0B4J246 113 aa11.5□□□□□ -0.57
TRAPPC3-209ENST00000616395 SPINK8P0C7L1 97 aa11.5□□□□□ -0.57
TRAPPC3-209ENST00000616395 LINC01556Q5JQF7 62 aa11.5□□□□□ -0.57
TRAPPC3-209ENST00000616395 CIRBP-AS1Q8TBR5 109 aa11.5□□□□□ -0.57
TRAPPC3-209ENST00000616395 PKHD1L1Q86WI1 4243 aa11.5□□□□□ -0.57
TRAPPC3-209ENST00000616395 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
TRAPPC3-209ENST00000616395 LECT2O14960 151 aa11.49□□□□□ -0.57
TRAPPC3-209ENST00000616395 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
TRAPPC3-209ENST00000616395 BATFQ16520 125 aa11.48□□□□□ -0.57
TRAPPC3-209ENST00000616395 TMEM238C9JI98 176 aa11.47□□□□□ -0.57
TRAPPC3-209ENST00000616395 APOMO95445 188 aa11.47□□□□□ -0.57
TRAPPC3-209ENST00000616395 COX6A2Q02221 97 aa11.47□□□□□ -0.57
TRAPPC3-209ENST00000616395 CD164L2Q6UWJ8 174 aa11.47□□□□□ -0.57
TRAPPC3-209ENST00000616395 C2orf91Q6ZV80 131 aa11.47□□□□□ -0.57
TRAPPC3-209ENST00000616395 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
TRAPPC3-209ENST00000616395 NDUFA12Q9UI09 145 aa11.47□□□□□ -0.57
TRAPPC3-209ENST00000616395 A0A087WZ39 114 aa11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 PRSS2P07478 247 aa11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 MALP21145 153 aa11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 HINT1P49773 126 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 HERV-K104P63124 156 aa11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 SRSF9Q13242 221 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 MIAQ16674 131 aa11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 COL5A1-AS1Q5SY13 56 aa11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 KLK12Q9UKR0 248 aa11.46□□□□□ -0.57
TRAPPC3-209ENST00000616395 TRAV8-3A0A0A6YYJ7 113 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 IGLV5-39A0A0G2JS06 123 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 TMEM238LA0A1B0GVL6 79 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 A6NDN8 102 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 A6NJY4 79 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 SMIM1B2RUZ4 78 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 COX7A2LO14548 114 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 XCL1P47992 114 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 TM2D2Q9BX73 214 aa11.45□□□□□ -0.58
TRAPPC3-209ENST00000616395 IGHV3OR16-9A0A0B4J2B5 98 aa11.44□□□□□ -0.58
TRAPPC3-209ENST00000616395 PTTG1IPP53801 180 aa11.44□□□□□ -0.58
TRAPPC3-209ENST00000616395 RPL37AP61513 92 aaKnown RBP11.44□□□□□ -0.58
TRAPPC3-209ENST00000616395 CHCHD10Q8WYQ3 142 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC3-209ENST00000616395 TTTY13Q9BZ97 58 aa11.44□□□□□ -0.58
TRAPPC3-209ENST00000616395 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
TRAPPC3-209ENST00000616395 Q6ZVH6 145 aa11.43□□□□□ -0.58
TRAPPC3-209ENST00000616395 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
TRAPPC3-209ENST00000616395 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
TRAPPC3-209ENST00000616395 UBE2WQ96B02 151 aa11.43□□□□□ -0.58
TRAPPC3-209ENST00000616395 SNHG12Q9BXW3 62 aa11.43□□□□□ -0.58
TRAPPC3-209ENST00000616395 NDUFA1O15239 70 aa11.42□□□□□ -0.58
TRAPPC3-209ENST00000616395 RMI2Q96E14 147 aa11.42□□□□□ -0.58
TRAPPC3-209ENST00000616395 SPANXB1Q9NS25 103 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC3-209ENST00000616395 CFAP161Q6P656 301 aa11.41□□□□□ -0.58
TRAPPC3-209ENST00000616395 C5orf38Q86SI9 138 aa11.41□□□□□ -0.58
TRAPPC3-209ENST00000616395 TOMM7Q9P0U1 55 aa11.41□□□□□ -0.58
TRAPPC3-209ENST00000616395 TIMM17BO60830 172 aa11.4□□□□□ -0.58
TRAPPC3-209ENST00000616395 CXCL5P42830 114 aa11.4□□□□□ -0.58
TRAPPC3-209ENST00000616395 TSPEAR-AS2P59090 65 aa11.4□□□□□ -0.58
TRAPPC3-209ENST00000616395 C6orf226Q5I0X4 101 aa11.4□□□□□ -0.58
TRAPPC3-209ENST00000616395 BVES-AS1Q5T3Y7 98 aa11.4□□□□□ -0.58
TRAPPC3-209ENST00000616395 CEND1Q8N111 149 aa11.39□□□□□ -0.59
TRAPPC3-209ENST00000616395 C1orf43Q9BWL3 253 aa11.39□□□□□ -0.59
TRAPPC3-209ENST00000616395 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
TRAPPC3-209ENST00000616395 IGLV10-54A0A075B6I4 117 aa11.38□□□□□ -0.59
TRAPPC3-209ENST00000616395 A0A0J9YXY3 114 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 307.9 ms