RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 ZNF137PP52743 207 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 ZNF625Q96I27 306 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 LINC00208Q96KT6 92 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 FXYD6Q9H0Q3 95 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 PROK2Q9HC23 129 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 CACNA1DQ01668 2161 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 MED13Q9UHV7 2174 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 BAZ2BQ9UIF8 2168 aaKnown RBP1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 USP32Q8NFA0 1604 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 PHRF1Q9P1Y6 1649 aaKnown RBP1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 C5P01031 1676 aa1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 XRN1Q8IZH2 1706 aaKnown RBP1.32□□□□□ -2.2
HMGB1P24-202ENST00000615653 DOCK11Q5JSL3 2073 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 ARFGEF2Q9Y6D5 1785 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 PI4KAP42356 2102 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 SEC16AO15027 2179 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 TRPM2O94759 1503 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 ZFHX2Q9C0A1 2572 aaPredicted RBP1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 CEP192Q8TEP8 1941 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 EIF2AK4Q9P2K8 1649 aaKnown RBP1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 TRGV1A0A0A0MS02 117 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 TRBV7-4A0A0J9YYF1 115 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 ACYP2P14621 99 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 DEFB107AQ8IZN7 70 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 LINC00304Q8N9R0 145 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 FDCSPQ8NFU4 85 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 TMEM263Q8WUH6 116 aaKnown RBP1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 C3P01024 1663 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 PLCH1Q4KWH8 1693 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 RREB1Q92766 1687 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 COL14A1Q05707 1796 aaKnown RBP1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 KIAA0100Q14667 2235 aaKnown RBP1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 SPAG17Q6Q759 2223 aa1.31□□□□□ -2.2
HMGB1P24-202ENST00000615653 COL5A3P25940 1745 aaPredicted RBP1.3□□□□□ -2.2
HMGB1P24-202ENST00000615653 QSER1Q2KHR3 1735 aa1.3□□□□□ -2.2
HMGB1P24-202ENST00000615653 SPRR4Q96PI1 79 aa1.3□□□□□ -2.2
HMGB1P24-202ENST00000615653 ANKRD36A6QL64 1941 aa1.3□□□□□ -2.2
HMGB1P24-202ENST00000615653 CR1P17927 2039 aa1.3□□□□□ -2.2
HMGB1P24-202ENST00000615653 COL4A2P08572 1712 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 ARFGEF1Q9Y6D6 1849 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 A0A087WTM6 91 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 IGKV4-1P06312 121 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 C10orf113Q5VZT2 155 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 SPATA8Q6RVD6 105 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 WFDC9Q8NEX5 89 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 MED12Q93074 2177 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 OTOGLQ3ZCN5 2332 aa1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 FAM208AQ9UK61 1670 aaKnown RBP1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 COL5A1P20908 1838 aaPredicted RBP1.29□□□□□ -2.2
HMGB1P24-202ENST00000615653 SHROOM3Q8TF72 1996 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 GPR179Q6PRD1 2367 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 TRBV30A0A0K0K1B3 111 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 LINC01549A6NIU2 74 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 IFI6P09912 130 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 S100A3P33764 101 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 NREPQ16612 68 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 C10orf99Q6UWK7 81 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 Q96NJ1 140 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 CCL19Q99731 98 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 UBL5Q9BZL1 73 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 CD163L1Q9NR16 1453 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 CPS1P31327 1500 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 SAMD9LQ8IVG5 1584 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 TJP1Q07157 1748 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 DDX60LQ5H9U9 1706 aaKnown RBP1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 NRAPQ86VF7 1730 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 SPTBP11277 2137 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 ESPL1Q14674 2120 aa1.28□□□□□ -2.2
HMGB1P24-202ENST00000615653 NCOA6Q14686 2063 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 TNRC6BQ9UPQ9 1833 aaKnown RBP1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 LOC285556D6RIA3 1793 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 PKD1L3Q7Z443 1732 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 NHSQ6T4R5 1651 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 ALS2Q96Q42 1657 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 PAPPAQ13219 1627 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 CICQ96RK0 1608 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 TRAV21A0A0B4J279 112 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 TRBV6-1A0A0K0K1D8 114 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 NCR3O14931 201 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 PIN1P1O15428 100 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 HCRTO43612 131 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 SPINK13Q1W4C9 94 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 DEFB112Q30KQ8 113 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 Q6ZRN7 208 aaPredicted RBP1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 TOMM5Q8N4H5 51 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 GAFA1Q96PS6 74 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 PLAC8Q9NZF1 115 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 BRWD1Q9NSI6 2320 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 UNC13CQ8NB66 2214 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 ALPK2Q86TB3 2170 aa1.27□□□□□ -2.21
HMGB1P24-202ENST00000615653 LY75O60449 1722 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 SCN7AQ01118 1682 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 ARFGEF3Q5TH69 2177 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 J3QRE1 110 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 PRH1P02810 166 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 FCER1GP30273 86 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 RPL38P63173 70 aaKnown RBP1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 SERF2P84101 59 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.26□□□□□ -2.21
HMGB1P24-202ENST00000615653 SMIM11BQ8TCY0 68 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms