RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 TRAV10A0A0B4J240 114 aa11.43□□□□□ -0.58
TSKU-205ENST00000612930 Q8IZM0 81 aa11.43□□□□□ -0.58
TSKU-205ENST00000612930 BCE1O60756 84 aa11.43□□□□□ -0.58
TSKU-205ENST00000612930 MXRA5Q9NR99 2828 aa11.43□□□□□ -0.58
TSKU-205ENST00000612930 ZANQ9Y493 2812 aa11.43□□□□□ -0.58
TSKU-205ENST00000612930 LINC01547P58512 204 aaPredicted RBP11.42□□□□□ -0.58
TSKU-205ENST00000612930 KLKP1Q107X0 134 aa11.42□□□□□ -0.58
TSKU-205ENST00000612930 C6orf99Q4VX62 202 aa11.42□□□□□ -0.58
TSKU-205ENST00000612930 LINC00336Q6ZUF6 198 aa11.42□□□□□ -0.58
TSKU-205ENST00000612930 LINC00482Q8N8I6 264 aa11.42□□□□□ -0.58
TSKU-205ENST00000612930 CUBNO60494 3623 aa11.42□□□□□ -0.58
TSKU-205ENST00000612930 RBM3P98179 157 aaKnown RBP11.41□□□□□ -0.58
TSKU-205ENST00000612930 Q8NDZ9 215 aa11.41□□□□□ -0.58
TSKU-205ENST00000612930 C16orf74Q96GX8 76 aa11.41□□□□□ -0.58
TSKU-205ENST00000612930 SNURFQ9Y675 71 aa11.41□□□□□ -0.58
TSKU-205ENST00000612930 RMI2Q96E14 147 aa11.41□□□□□ -0.58
TSKU-205ENST00000612930 J3QLI3 93 aa11.4□□□□□ -0.58
TSKU-205ENST00000612930 LINC00575Q6W349 94 aa11.4□□□□□ -0.58
TSKU-205ENST00000612930 C11orf44Q8N8P7 122 aa11.4□□□□□ -0.58
TSKU-205ENST00000612930 FSHBP01225 129 aa11.4□□□□□ -0.59
TSKU-205ENST00000612930 LOC110117498A0A087WWA1 95 aa11.39□□□□□ -0.59
TSKU-205ENST00000612930 A0A1W2PRX2 142 aa11.39□□□□□ -0.59
TSKU-205ENST00000612930 HAMPP81172 84 aa11.39□□□□□ -0.59
TSKU-205ENST00000612930 Q6ZVQ6 151 aa11.39□□□□□ -0.59
TSKU-205ENST00000612930 WNK1Q9H4A3 2382 aa11.39□□□□□ -0.59
TSKU-205ENST00000612930 CLPSL2Q6UWE3 100 aa11.38□□□□□ -0.59
TSKU-205ENST00000612930 C16orf95Q9H693 158 aa11.38□□□□□ -0.59
TSKU-205ENST00000612930 FP248Q71RG6 208 aaPredicted RBP11.37□□□□□ -0.59
TSKU-205ENST00000612930 C6orf223Q8N319 242 aa11.37□□□□□ -0.59
TSKU-205ENST00000612930 CHD6Q8TD26 2715 aa11.37□□□□□ -0.59
TSKU-205ENST00000612930 NBPF19A0A087WUL8 3843 aa11.37□□□□□ -0.59
TSKU-205ENST00000612930 CR1P17927 2039 aa11.37□□□□□ -0.59
TSKU-205ENST00000612930 ZNF561-AS1K7EIQ3 104 aa11.37□□□□□ -0.59
TSKU-205ENST00000612930 KIAA0087Q14695 138 aa11.37□□□□□ -0.59
TSKU-205ENST00000612930 PRO0628Q9UI54 55 aa11.37□□□□□ -0.59
TSKU-205ENST00000612930 AKAP9Q99996 3911 aa11.37□□□□□ -0.59
TSKU-205ENST00000612930 F8WEM9 126 aa11.36□□□□□ -0.59
TSKU-205ENST00000612930 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
TSKU-205ENST00000612930 WFDC10AQ9H1F0 79 aa11.36□□□□□ -0.59
TSKU-205ENST00000612930 DSCR9P59020 149 aa11.36□□□□□ -0.59
TSKU-205ENST00000612930 SPATA3Q8NHX4 192 aa11.36□□□□□ -0.59
TSKU-205ENST00000612930 LAMTOR3Q9UHA4 124 aa11.36□□□□□ -0.59
TSKU-205ENST00000612930 USP9YO00507 2555 aaPredicted RBP11.35□□□□□ -0.59
TSKU-205ENST00000612930 RPL35AP18077 110 aaKnown RBP11.34□□□□□ -0.59
TSKU-205ENST00000612930 COX17Q14061 63 aa11.34□□□□□ -0.59
TSKU-205ENST00000612930 SMIM26A0A096LP01 95 aa11.33□□□□□ -0.6
TSKU-205ENST00000612930 ZNF843Q8N446 348 aa11.33□□□□□ -0.6
TSKU-205ENST00000612930 CSNK1G2-AS1Q8NCQ2 148 aa11.33□□□□□ -0.6
TSKU-205ENST00000612930 MYO9AB2RTY4 2548 aa11.32□□□□□ -0.6
TSKU-205ENST00000612930 A0A1B0GUV1 79 aa11.32□□□□□ -0.6
TSKU-205ENST00000612930 CXCL6P80162 114 aa11.32□□□□□ -0.6
TSKU-205ENST00000612930 Q8N3U1 123 aa11.31□□□□□ -0.6
TSKU-205ENST00000612930 TM2D3Q9BRN9 247 aa11.31□□□□□ -0.6
TSKU-205ENST00000612930 ITPR1Q14643 2758 aa11.31□□□□□ -0.6
TSKU-205ENST00000612930 IGHV4-28A0A0C4DH34 117 aa11.3□□□□□ -0.6
TSKU-205ENST00000612930 JMJD1CQ15652 2540 aa11.3□□□□□ -0.6
TSKU-205ENST00000612930 NCOR2Q9Y618 2525 aa11.3□□□□□ -0.6
TSKU-205ENST00000612930 C9orf66Q5T8R8 295 aa11.3□□□□□ -0.6
TSKU-205ENST00000612930 LINC00269Q8N2A0 174 aa11.3□□□□□ -0.6
TSKU-205ENST00000612930 LINC00474Q9P2X8 69 aa11.3□□□□□ -0.6
TSKU-205ENST00000612930 SETXQ7Z333 2677 aaKnown RBP11.29□□□□□ -0.6
TSKU-205ENST00000612930 GYPEP15421 78 aa11.29□□□□□ -0.6
TSKU-205ENST00000612930 Q6ZQY7 126 aa11.29□□□□□ -0.6
TSKU-205ENST00000612930 TLN2Q9Y4G6 2542 aa11.29□□□□□ -0.6
TSKU-205ENST00000612930 SPTBN4Q9H254 2564 aa11.28□□□□□ -0.6
TSKU-205ENST00000612930 TRBV7-6A0A0J9YX20 115 aa11.28□□□□□ -0.6
TSKU-205ENST00000612930 TRBV7-4A0A0J9YYF1 115 aa11.28□□□□□ -0.6
TSKU-205ENST00000612930 IGHV4-31P0DP07 118 aa11.28□□□□□ -0.6
TSKU-205ENST00000612930 SCXQ7RTU7 201 aa11.28□□□□□ -0.6
TSKU-205ENST00000612930 USP9XQ93008 2570 aaPredicted RBP11.27□□□□□ -0.6
TSKU-205ENST00000612930 CCL24O00175 119 aa11.27□□□□□ -0.6
TSKU-205ENST00000612930 DEFB130BP0DP73 79 aa11.27□□□□□ -0.6
TSKU-205ENST00000612930 DEFB130AP0DP74 79 aa11.27□□□□□ -0.6
TSKU-205ENST00000612930 FBN2P35556 2912 aa11.27□□□□□ -0.61
TSKU-205ENST00000612930 CD164L2Q6UWJ8 174 aa11.27□□□□□ -0.61
TSKU-205ENST00000612930 MUC7Q8TAX7 377 aa11.27□□□□□ -0.61
TSKU-205ENST00000612930 WFDC11Q8NEX6 87 aa11.26□□□□□ -0.61
TSKU-205ENST00000612930 C19orf73Q9NVV2 129 aa11.26□□□□□ -0.61
TSKU-205ENST00000612930 IGLV10-54A0A075B6I4 117 aa11.26□□□□□ -0.61
TSKU-205ENST00000612930 A0A096LPF7 62 aa11.26□□□□□ -0.61
TSKU-205ENST00000612930 PDE6GP18545 87 aa11.25□□□□□ -0.61
TSKU-205ENST00000612930 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
TSKU-205ENST00000612930 C1orf43Q9BWL3 253 aa11.25□□□□□ -0.61
TSKU-205ENST00000612930 UTP20O75691 2785 aaKnown RBP11.25□□□□□ -0.61
TSKU-205ENST00000612930 ANKRD17O75179 2603 aaKnown RBP11.25□□□□□ -0.61
TSKU-205ENST00000612930 CHD8Q9HCK8 2581 aa11.24□□□□□ -0.61
TSKU-205ENST00000612930 NDUFC1O43677 76 aa11.24□□□□□ -0.61
TSKU-205ENST00000612930 IGLV6-57P01721 117 aa11.24□□□□□ -0.61
TSKU-205ENST00000612930 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
TSKU-205ENST00000612930 MIFP14174 115 aa11.23□□□□□ -0.61
TSKU-205ENST00000612930 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
TSKU-205ENST00000612930 NIPBLQ6KC79 2804 aaeCLIP11.22□□□□□ -0.61
TSKU-205ENST00000612930 POLQO75417 2590 aa11.22□□□□□ -0.61
TSKU-205ENST00000612930 NREPQ16612 68 aa11.22□□□□□ -0.61
TSKU-205ENST00000612930 UNQ6190/PRO20217Q6UXQ8 127 aa11.22□□□□□ -0.61
TSKU-205ENST00000612930 CMC4P56277 68 aaPredicted RBP11.21□□□□□ -0.61
TSKU-205ENST00000612930 TEX15Q9BXT5 2789 aa11.21□□□□□ -0.61
TSKU-205ENST00000612930 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.62
TSKU-205ENST00000612930 FLNCQ14315 2725 aa11.2□□□□□ -0.62
TSKU-205ENST00000612930 DOPEY1Q5JWR5 2465 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms