RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 TMEM238C9JI98 176 aa6.03□□□□□ -1.44
CCDC47-207ENST00000612558 CRPP02741 224 aa6.03□□□□□ -1.44
CCDC47-207ENST00000612558 PTTG1IPP53801 180 aa6.03□□□□□ -1.44
CCDC47-207ENST00000612558 COX7B2Q8TF08 81 aa6.03□□□□□ -1.44
CCDC47-207ENST00000612558 Q9H8V8 135 aa6.03□□□□□ -1.44
CCDC47-207ENST00000612558 COX7A2LO14548 114 aa6.02□□□□□ -1.45
CCDC47-207ENST00000612558 DNAH10OSP0CZ25 163 aa6.02□□□□□ -1.45
CCDC47-207ENST00000612558 FXYD2P54710 66 aa6.02□□□□□ -1.45
CCDC47-207ENST00000612558 HERV-K104P63124 156 aa6.02□□□□□ -1.45
CCDC47-207ENST00000612558 MIAQ16674 131 aa6.02□□□□□ -1.45
CCDC47-207ENST00000612558 UBE2WQ96B02 151 aa6.02□□□□□ -1.45
CCDC47-207ENST00000612558 LINC00588Q9Y4M8 146 aa6.02□□□□□ -1.45
CCDC47-207ENST00000612558 TIMM17BO60830 172 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 FOXI1Q12951 378 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 CIRBPQ14011 172 aaKnown RBP6.01□□□□□ -1.45
CCDC47-207ENST00000612558 SFTA2Q6UW10 78 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 ZNF625Q96I27 306 aaPredicted RBP6.01□□□□□ -1.45
CCDC47-207ENST00000612558 TOMM7Q9P0U1 55 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 A0A1B0GV90 55 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 MALP21145 153 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 Q6ZVH6 145 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 Q8IZM0 81 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 LITAFQ99732 161 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 UPK3BQ9BT76 320 aa6.01□□□□□ -1.45
CCDC47-207ENST00000612558 DNAH7Q8WXX0 4024 aa6□□□□□ -1.45
CCDC47-207ENST00000612558 K7EP13 123 aa6□□□□□ -1.45
CCDC47-207ENST00000612558 PRSS2P07478 247 aa6□□□□□ -1.45
CCDC47-207ENST00000612558 SMIM13P0DJ93 91 aa6□□□□□ -1.45
CCDC47-207ENST00000612558 C6orf226Q5I0X4 101 aa6□□□□□ -1.45
CCDC47-207ENST00000612558 SPANXDQ9BXN6 97 aa6□□□□□ -1.45
CCDC47-207ENST00000612558 SPANXCQ9NY87 97 aa6□□□□□ -1.45
CCDC47-207ENST00000612558 NUPR2A6NF83 97 aa5.99□□□□□ -1.45
CCDC47-207ENST00000612558 TAX1BP3O14907 124 aa5.99□□□□□ -1.45
CCDC47-207ENST00000612558 APOMO95445 188 aa5.99□□□□□ -1.45
CCDC47-207ENST00000612558 ADAMTSL4-AS1Q5T5F5 129 aa5.99□□□□□ -1.45
CCDC47-207ENST00000612558 NHP2Q9NX24 153 aaKnown RBP5.99□□□□□ -1.45
CCDC47-207ENST00000612558 APLNQ9ULZ1 77 aa5.99□□□□□ -1.45
CCDC47-207ENST00000612558 MEGF8Q7Z7M0 2845 aa5.98□□□□□ -1.45
CCDC47-207ENST00000612558 RPL24P83731 157 aaKnown RBP5.98□□□□□ -1.45
CCDC47-207ENST00000612558 MEIG1Q5JSS6 88 aa5.98□□□□□ -1.45
CCDC47-207ENST00000612558 MUSTN1Q8IVN3 82 aa5.98□□□□□ -1.45
CCDC47-207ENST00000612558 KLK5Q9Y337 293 aaPredicted RBP5.98□□□□□ -1.45
CCDC47-207ENST00000612558 COX11Q9Y6N1 276 aa5.98□□□□□ -1.45
CCDC47-207ENST00000612558 A0A1B0GWB2 263 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 IFITM1P13164 125 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 CXCL5P42830 114 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 KIAA0087Q14695 138 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 CFAP161Q6P656 301 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 KRTAP26-1Q6PEX3 210 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 C1orf43Q9BWL3 253 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 IBA57-AS1B1ANH7 110 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 CKS1BP61024 79 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 COPS9Q8WXC6 57 aa5.97□□□□□ -1.45
CCDC47-207ENST00000612558 A4D1N5 150 aa5.96□□□□□ -1.46
CCDC47-207ENST00000612558 C9orf118A6NHY6 69 aa5.96□□□□□ -1.46
CCDC47-207ENST00000612558 K7ERJ3 54 aa5.96□□□□□ -1.46
CCDC47-207ENST00000612558 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
CCDC47-207ENST00000612558 DAND5Q8N907 189 aa5.96□□□□□ -1.46
CCDC47-207ENST00000612558 RAB37Q96AX2 223 aa5.96□□□□□ -1.46
CCDC47-207ENST00000612558 IGKV2D-24A0A075B6R9 120 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.95□□□□□ -1.46
CCDC47-207ENST00000612558 A0A0U1RRA0 63 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 CFC1BP0CG36 223 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 CFC1P0CG37 223 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 SPAG11BQ08648 103 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 C2orf82Q6UX34 121 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 UBE2DNLQ8IWF7 75 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 LINC00308Q8TCZ7 52 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 CSMD3Q7Z407 3707 aa5.95□□□□□ -1.46
CCDC47-207ENST00000612558 DNAH1Q9P2D7 4330 aa5.94□□□□□ -1.46
CCDC47-207ENST00000612558 LINC00158P58513 81 aa5.94□□□□□ -1.46
CCDC47-207ENST00000612558 RMI2Q96E14 147 aa5.94□□□□□ -1.46
CCDC47-207ENST00000612558 PPDPFQ9H3Y8 114 aa5.94□□□□□ -1.46
CCDC47-207ENST00000612558 Q9HAA7 133 aa5.94□□□□□ -1.46
CCDC47-207ENST00000612558 ERG28Q9UKR5 140 aa5.94□□□□□ -1.46
CCDC47-207ENST00000612558 PLECQ15149 4684 aaKnown RBP5.94□□□□□ -1.46
CCDC47-207ENST00000612558 NPC2P61916 151 aa5.93□□□□□ -1.46
CCDC47-207ENST00000612558 COX17Q14061 63 aa5.93□□□□□ -1.46
CCDC47-207ENST00000612558 MIR7-3HGQ8N6C7 128 aa5.93□□□□□ -1.46
CCDC47-207ENST00000612558 A0A0B4J2C4 111 aa5.93□□□□□ -1.46
CCDC47-207ENST00000612558 H3BUT2 72 aa5.93□□□□□ -1.46
CCDC47-207ENST00000612558 PFN2P35080 140 aa5.93□□□□□ -1.46
CCDC47-207ENST00000612558 PRO1854Q9UHT4 67 aa5.93□□□□□ -1.46
CCDC47-207ENST00000612558 ZNF561-AS1K7EIQ3 104 aa5.92□□□□□ -1.46
CCDC47-207ENST00000612558 VAMP3Q15836 100 aa5.92□□□□□ -1.46
CCDC47-207ENST00000612558 UNQ6190/PRO20217Q6UXQ8 127 aa5.92□□□□□ -1.46
CCDC47-207ENST00000612558 SOSTDC1Q6X4U4 206 aa5.92□□□□□ -1.46
CCDC47-207ENST00000612558 C6orf223Q8N319 242 aa5.92□□□□□ -1.46
CCDC47-207ENST00000612558 NTN5Q8WTR8 489 aaPredicted RBP5.92□□□□□ -1.46
CCDC47-207ENST00000612558 LYSTQ99698 3801 aa5.91□□□□□ -1.46
CCDC47-207ENST00000612558 GVQW2A0A096LPI5 108 aaPredicted RBP5.91□□□□□ -1.46
CCDC47-207ENST00000612558 C15orf56Q8N910 161 aa5.91□□□□□ -1.46
CCDC47-207ENST00000612558 LINC00526Q96FQ7 95 aa5.91□□□□□ -1.46
CCDC47-207ENST00000612558 NAA38Q9BRA0 125 aaKnown RBP5.91□□□□□ -1.46
CCDC47-207ENST00000612558 FBN3Q75N90 2809 aa5.91□□□□□ -1.46
CCDC47-207ENST00000612558 STARD9Q9P2P6 4700 aa5.9□□□□□ -1.46
CCDC47-207ENST00000612558 A0A1W2PPM0 123 aa5.9□□□□□ -1.46
CCDC47-207ENST00000612558 F8WDY8 70 aa5.9□□□□□ -1.46
CCDC47-207ENST00000612558 FABP2P12104 132 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms