RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 SCGB1D4Q6XE38 83 aa11.59□□□□□ -0.55
SREK1-216ENST00000612404 ZNF625Q96I27 306 aaPredicted RBP11.59□□□□□ -0.55
SREK1-216ENST00000612404 Q6ZRN7 208 aaPredicted RBP11.58□□□□□ -0.56
SREK1-216ENST00000612404 SACSQ9NZJ4 4579 aa11.57□□□□□ -0.56
SREK1-216ENST00000612404 C1orf134Q5TEV5 83 aa11.57□□□□□ -0.56
SREK1-216ENST00000612404 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
SREK1-216ENST00000612404 CXCL5P42830 114 aa11.56□□□□□ -0.56
SREK1-216ENST00000612404 HNRNPA3P51991 378 aaKnown RBP11.56□□□□□ -0.56
SREK1-216ENST00000612404 A0A0J9YXY3 114 aa11.55□□□□□ -0.56
SREK1-216ENST00000612404 WFDC2Q14508 124 aa11.55□□□□□ -0.56
SREK1-216ENST00000612404 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
SREK1-216ENST00000612404 HERV-K104P63124 156 aa11.54□□□□□ -0.56
SREK1-216ENST00000612404 C2orf91Q6ZV80 131 aa11.54□□□□□ -0.56
SREK1-216ENST00000612404 LCE6AA0A183 80 aa11.54□□□□□ -0.56
SREK1-216ENST00000612404 SFTA2Q6UW10 78 aa11.54□□□□□ -0.56
SREK1-216ENST00000612404 UNQ6190/PRO20217Q6UXQ8 127 aa11.54□□□□□ -0.56
SREK1-216ENST00000612404 CAMK2N2Q96S95 79 aa11.54□□□□□ -0.56
SREK1-216ENST00000612404 DDTP30046 118 aa11.53□□□□□ -0.56
SREK1-216ENST00000612404 MEIG1Q5JSS6 88 aa11.53□□□□□ -0.56
SREK1-216ENST00000612404 C10orf25Q5T742 122 aa11.53□□□□□ -0.56
SREK1-216ENST00000612404 C2orf48Q96LS8 159 aa11.52□□□□□ -0.57
SREK1-216ENST00000612404 A0A0U1RRA0 63 aa11.51□□□□□ -0.57
SREK1-216ENST00000612404 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
SREK1-216ENST00000612404 FRAS1Q86XX4 4008 aa11.5□□□□□ -0.57
SREK1-216ENST00000612404 CIRBPQ14011 172 aaKnown RBP11.5□□□□□ -0.57
SREK1-216ENST00000612404 C14orf177Q52M58 125 aa11.5□□□□□ -0.57
SREK1-216ENST00000612404 HIGD1BQ9P298 99 aa11.5□□□□□ -0.57
SREK1-216ENST00000612404 PFN2P35080 140 aa11.49□□□□□ -0.57
SREK1-216ENST00000612404 C9orf116Q5BN46 136 aaPredicted RBP11.49□□□□□ -0.57
SREK1-216ENST00000612404 Q6ZRU5 148 aa11.49□□□□□ -0.57
SREK1-216ENST00000612404 KMT2CQ8NEZ4 4911 aaKnown RBP11.49□□□□□ -0.57
SREK1-216ENST00000612404 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
SREK1-216ENST00000612404 SYCNQ0VAF6 134 aa11.48□□□□□ -0.57
SREK1-216ENST00000612404 ERG28Q9UKR5 140 aa11.48□□□□□ -0.57
SREK1-216ENST00000612404 TMEM238C9JI98 176 aa11.48□□□□□ -0.57
SREK1-216ENST00000612404 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
SREK1-216ENST00000612404 F8WDY8 70 aa11.47□□□□□ -0.57
SREK1-216ENST00000612404 LINC00158P58513 81 aa11.47□□□□□ -0.57
SREK1-216ENST00000612404 SRSF9Q13242 221 aaKnown RBP eCLIP11.47□□□□□ -0.57
SREK1-216ENST00000612404 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
SREK1-216ENST00000612404 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.47□□□□□ -0.57
SREK1-216ENST00000612404 SLPIP03973 132 aa11.47□□□□□ -0.57
SREK1-216ENST00000612404 ADAMTSL4-AS1Q5T5F5 129 aa11.47□□□□□ -0.57
SREK1-216ENST00000612404 DAND5Q8N907 189 aa11.47□□□□□ -0.57
SREK1-216ENST00000612404 LITAFQ99732 161 aa11.47□□□□□ -0.57
SREK1-216ENST00000612404 TIMM17BO60830 172 aa11.46□□□□□ -0.57
SREK1-216ENST00000612404 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
SREK1-216ENST00000612404 DNAH17Q9UFH2 4485 aa11.46□□□□□ -0.58
SREK1-216ENST00000612404 A0A087WTM6 91 aa11.45□□□□□ -0.58
SREK1-216ENST00000612404 TRBV30A0A0K0K1B3 111 aa11.45□□□□□ -0.58
SREK1-216ENST00000612404 RYR2Q92736 4967 aa11.45□□□□□ -0.58
SREK1-216ENST00000612404 RTL8CO15255 209 aa11.44□□□□□ -0.58
SREK1-216ENST00000612404 SPANXB1Q9NS25 103 aaPredicted RBP11.44□□□□□ -0.58
SREK1-216ENST00000612404 NPC2P61916 151 aa11.43□□□□□ -0.58
SREK1-216ENST00000612404 COX17Q14061 63 aa11.43□□□□□ -0.58
SREK1-216ENST00000612404 MIR7-3HGQ8N6C7 128 aa11.43□□□□□ -0.58
SREK1-216ENST00000612404 Q8N814 137 aa11.43□□□□□ -0.58
SREK1-216ENST00000612404 HSD52Q0P140 79 aa11.42□□□□□ -0.58
SREK1-216ENST00000612404 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.42□□□□□ -0.58
SREK1-216ENST00000612404 SPANXDQ9BXN6 97 aa11.42□□□□□ -0.58
SREK1-216ENST00000612404 SPANXCQ9NY87 97 aa11.42□□□□□ -0.58
SREK1-216ENST00000612404 TNP2Q05952 138 aa11.41□□□□□ -0.58
SREK1-216ENST00000612404 HECTD4Q9Y4D8 3996 aa11.41□□□□□ -0.58
SREK1-216ENST00000612404 GCSHP23434 173 aa11.41□□□□□ -0.58
SREK1-216ENST00000612404 CNBPP62633 177 aaKnown RBP11.41□□□□□ -0.58
SREK1-216ENST00000612404 LBHQ53QV2 105 aaPredicted RBP11.41□□□□□ -0.58
SREK1-216ENST00000612404 HINT1P49773 126 aaPredicted RBP11.4□□□□□ -0.58
SREK1-216ENST00000612404 TAL2Q16559 108 aa11.4□□□□□ -0.58
SREK1-216ENST00000612404 Q6ZVH6 145 aa11.39□□□□□ -0.59
SREK1-216ENST00000612404 EREGO14944 169 aa11.39□□□□□ -0.59
SREK1-216ENST00000612404 RNF151Q2KHN1 245 aa11.39□□□□□ -0.59
SREK1-216ENST00000612404 MUSTN1Q8IVN3 82 aa11.39□□□□□ -0.59
SREK1-216ENST00000612404 CEND1Q8N111 149 aa11.39□□□□□ -0.59
SREK1-216ENST00000612404 NDUFC2-KCTD14E9PQ53 114 aa11.38□□□□□ -0.59
SREK1-216ENST00000612404 LINC00308Q8TCZ7 52 aa11.38□□□□□ -0.59
SREK1-216ENST00000612404 EIF4EBP3O60516 100 aaPredicted RBP11.36□□□□□ -0.59
SREK1-216ENST00000612404 RPL18AQ02543 176 aaKnown RBP11.36□□□□□ -0.59
SREK1-216ENST00000612404 BATFQ16520 125 aa11.36□□□□□ -0.59
SREK1-216ENST00000612404 FAT2Q9NYQ8 4349 aa11.36□□□□□ -0.59
SREK1-216ENST00000612404 IFITM1P13164 125 aa11.36□□□□□ -0.59
SREK1-216ENST00000612404 PTTG1IPP53801 180 aa11.36□□□□□ -0.59
SREK1-216ENST00000612404 GAGE2EQ4V326 116 aa11.36□□□□□ -0.59
SREK1-216ENST00000612404 SND1-IT1Q9HBX3 110 aa11.36□□□□□ -0.59
SREK1-216ENST00000612404 GAGE2DQ9UEU5 116 aa11.36□□□□□ -0.59
SREK1-216ENST00000612404 M0R143 59 aa11.35□□□□□ -0.59
SREK1-216ENST00000612404 BVES-AS1Q5T3Y7 98 aa11.35□□□□□ -0.59
SREK1-216ENST00000612404 SOSTDC1Q6X4U4 206 aa11.35□□□□□ -0.59
SREK1-216ENST00000612404 Q6ZRP5 223 aa11.35□□□□□ -0.59
SREK1-216ENST00000612404 COPS9Q8WXC6 57 aa11.35□□□□□ -0.59
SREK1-216ENST00000612404 FUSP35637 526 aaKnown RBP eCLIP11.35□□□□□ -0.59
SREK1-216ENST00000612404 FXYD2P54710 66 aa11.35□□□□□ -0.59
SREK1-216ENST00000612404 RPL24P83731 157 aaKnown RBP11.34□□□□□ -0.59
SREK1-216ENST00000612404 XAGE1AQ9HD64 81 aa11.34□□□□□ -0.59
SREK1-216ENST00000612404 LINC01620Q4KN68 170 aa11.33□□□□□ -0.6
SREK1-216ENST00000612404 LOC107984640A0A0U1RRK4 108 aa11.33□□□□□ -0.6
SREK1-216ENST00000612404 TLX1NBP0CAT3 122 aa11.33□□□□□ -0.6
SREK1-216ENST00000612404 C9orf163Q8N9P6 203 aa11.32□□□□□ -0.6
SREK1-216ENST00000612404 DNAH11Q96DT5 4516 aa11.32□□□□□ -0.6
SREK1-216ENST00000612404 GAGE2BQ13066 116 aa11.32□□□□□ -0.6
SREK1-216ENST00000612404 A4D1N5 150 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms