RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
CDH1-212ENST00000611625 PRB2P02812 416 aaPredicted RBP8.79□□□□□ -1
CDH1-212ENST00000611625 PLA2G2AP14555 144 aa8.79□□□□□ -1
CDH1-212ENST00000611625 WFDC9Q8NEX5 89 aa8.79□□□□□ -1
CDH1-212ENST00000611625 UBE2AP49459 152 aa8.79□□□□□ -1
CDH1-212ENST00000611625 SBSPONQ8IVN8 264 aa8.79□□□□□ -1
CDH1-212ENST00000611625 A0A1B0GUV1 79 aa8.78□□□□□ -1
CDH1-212ENST00000611625 NDUFC2O95298 119 aa8.78□□□□□ -1
CDH1-212ENST00000611625 A0A087WVE0 104 aa8.78□□□□□ -1
CDH1-212ENST00000611625 C16orf95Q9H693 158 aa8.78□□□□□ -1
CDH1-212ENST00000611625 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.77□□□□□ -1
CDH1-212ENST00000611625 HIGD2AQ9BW72 106 aa8.77□□□□□ -1
CDH1-212ENST00000611625 IGKV2-28A0A075B6P5 120 aa8.77□□□□□ -1.01
CDH1-212ENST00000611625 IGKV2D-28P01615 120 aa8.77□□□□□ -1.01
CDH1-212ENST00000611625 CFAP54Q96N23 3096 aa8.77□□□□□ -1.01
CDH1-212ENST00000611625 NDUFB1O75438 58 aa8.76□□□□□ -1.01
CDH1-212ENST00000611625 SMR3AQ99954 134 aa8.76□□□□□ -1.01
CDH1-212ENST00000611625 KLK5Q9Y337 293 aaPredicted RBP8.76□□□□□ -1.01
CDH1-212ENST00000611625 IGHV3OR16-9A0A0B4J2B5 98 aa8.76□□□□□ -1.01
CDH1-212ENST00000611625 C3orf84H3BNL1 204 aa8.76□□□□□ -1.01
CDH1-212ENST00000611625 NDUFS5O43920 106 aa8.76□□□□□ -1.01
CDH1-212ENST00000611625 IGHV4-30-4P0DP06 118 aa8.76□□□□□ -1.01
CDH1-212ENST00000611625 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
CDH1-212ENST00000611625 BRK1Q8WUW1 75 aa8.76□□□□□ -1.01
CDH1-212ENST00000611625 TRBV10-3A0A0K0K1G6 114 aa8.75□□□□□ -1.01
CDH1-212ENST00000611625 TRBV7-7A0A0K0K1E9 115 aa8.75□□□□□ -1.01
CDH1-212ENST00000611625 SOSTDC1Q6X4U4 206 aa8.75□□□□□ -1.01
CDH1-212ENST00000611625 EPG5Q9HCE0 2579 aa8.74□□□□□ -1.01
CDH1-212ENST00000611625 FAM19A5Q7Z5A7 132 aaPredicted RBP8.74□□□□□ -1.01
CDH1-212ENST00000611625 SHISA2Q6UWI4 295 aa8.73□□□□□ -1.01
CDH1-212ENST00000611625 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.73□□□□□ -1.01
CDH1-212ENST00000611625 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
CDH1-212ENST00000611625 EGFEM1PQ0D2K5 195 aa8.73□□□□□ -1.01
CDH1-212ENST00000611625 SNURFQ9Y675 71 aa8.72□□□□□ -1.01
CDH1-212ENST00000611625 FAM19A1Q7Z5A9 133 aa8.72□□□□□ -1.01
CDH1-212ENST00000611625 LINC01561Q8N1V8 128 aa8.72□□□□□ -1.01
CDH1-212ENST00000611625 PRUNE2Q8WUY3 3088 aa8.72□□□□□ -1.01
CDH1-212ENST00000611625 LITAFQ99732 161 aa8.72□□□□□ -1.01
CDH1-212ENST00000611625 FHL3Q13643 280 aa8.71□□□□□ -1.01
CDH1-212ENST00000611625 C6orf223Q8N319 242 aa8.71□□□□□ -1.01
CDH1-212ENST00000611625 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.02
CDH1-212ENST00000611625 TRAV10A0A0B4J240 114 aa8.7□□□□□ -1.02
CDH1-212ENST00000611625 C14orf177Q52M58 125 aa8.7□□□□□ -1.02
CDH1-212ENST00000611625 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
CDH1-212ENST00000611625 FASNP49327 2511 aaKnown RBP8.7□□□□□ -1.02
CDH1-212ENST00000611625 FAM218AQ96MZ4 157 aa8.69□□□□□ -1.02
CDH1-212ENST00000611625 NDUFC1O43677 76 aa8.69□□□□□ -1.02
CDH1-212ENST00000611625 H0Y9J4 135 aa8.69□□□□□ -1.02
CDH1-212ENST00000611625 B9D2Q9BPU9 175 aa8.69□□□□□ -1.02
CDH1-212ENST00000611625 FAM19A3Q7Z5A8 133 aa8.68□□□□□ -1.02
CDH1-212ENST00000611625 RPL37AP8A6NKH3 93 aa8.68□□□□□ -1.02
CDH1-212ENST00000611625 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
CDH1-212ENST00000611625 NANOS2P60321 138 aaKnown RBP8.68□□□□□ -1.02
CDH1-212ENST00000611625 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
CDH1-212ENST00000611625 TRIOO75962 3097 aa8.68□□□□□ -1.02
CDH1-212ENST00000611625 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
CDH1-212ENST00000611625 A0A096LNI7 61 aa8.67□□□□□ -1.02
CDH1-212ENST00000611625 FSHBP01225 129 aa8.67□□□□□ -1.02
CDH1-212ENST00000611625 RETNQ9HD89 108 aa8.67□□□□□ -1.02
CDH1-212ENST00000611625 A8MTW9 85 aa8.67□□□□□ -1.02
CDH1-212ENST00000611625 A0A0J9YWU9 116 aa8.66□□□□□ -1.02
CDH1-212ENST00000611625 MPLKIPQ8TAP9 179 aa8.66□□□□□ -1.02
CDH1-212ENST00000611625 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.65□□□□□ -1.02
CDH1-212ENST00000611625 ATP5EP56381 51 aaPredicted RBP8.65□□□□□ -1.02
CDH1-212ENST00000611625 Q6ZTC4 211 aa8.65□□□□□ -1.02
CDH1-212ENST00000611625 NDUFC2-KCTD14E9PQ53 114 aa8.64□□□□□ -1.03
CDH1-212ENST00000611625 LYPD5Q6UWN5 251 aa8.63□□□□□ -1.03
CDH1-212ENST00000611625 LOC107984640A0A0U1RRK4 108 aa8.63□□□□□ -1.03
CDH1-212ENST00000611625 ZNF575Q86XF7 245 aa8.63□□□□□ -1.03
CDH1-212ENST00000611625 WFDC10BQ8IUB3 73 aa8.63□□□□□ -1.03
CDH1-212ENST00000611625 Q8N3U1 123 aa8.63□□□□□ -1.03
CDH1-212ENST00000611625 CDH23Q9H251 3354 aa8.63□□□□□ -1.03
CDH1-212ENST00000611625 Q6ZVQ6 151 aa8.62□□□□□ -1.03
CDH1-212ENST00000611625 MGAQ8IWI9 3026 aa8.61□□□□□ -1.03
CDH1-212ENST00000611625 CELA1Q9UNI1 258 aa8.61□□□□□ -1.03
CDH1-212ENST00000611625 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
CDH1-212ENST00000611625 C2orf48Q96LS8 159 aa8.6□□□□□ -1.03
CDH1-212ENST00000611625 WFDC13Q8IUB5 93 aa8.6□□□□□ -1.03
CDH1-212ENST00000611625 HRCT1Q6UXD1 115 aa8.6□□□□□ -1.03
CDH1-212ENST00000611625 Q6ZRU5 148 aa8.59□□□□□ -1.03
CDH1-212ENST00000611625 X6R8D5 127 aa8.59□□□□□ -1.03
CDH1-212ENST00000611625 C1orf137Q5JT78 98 aa8.59□□□□□ -1.03
CDH1-212ENST00000611625 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
CDH1-212ENST00000611625 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
CDH1-212ENST00000611625 WDFY4Q6ZS81 3184 aa8.59□□□□□ -1.03
CDH1-212ENST00000611625 XIRP2A4UGR9 3374 aa8.57□□□□□ -1.04
CDH1-212ENST00000611625 SVIPQ8NHG7 77 aa8.57□□□□□ -1.04
CDH1-212ENST00000611625 FAM30AQ9NZY2 134 aa8.57□□□□□ -1.04
CDH1-212ENST00000611625 VPS13AQ96RL7 3174 aa8.56□□□□□ -1.04
CDH1-212ENST00000611625 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
CDH1-212ENST00000611625 SERP1Q9Y6X1 66 aa8.56□□□□□ -1.04
CDH1-212ENST00000611625 SMIM26A0A096LP01 95 aa8.55□□□□□ -1.04
CDH1-212ENST00000611625 F8WDY8 70 aa8.55□□□□□ -1.04
CDH1-212ENST00000611625 SPTSSBQ8NFR3 76 aa8.55□□□□□ -1.04
CDH1-212ENST00000611625 CRYGAP11844 174 aa8.55□□□□□ -1.04
CDH1-212ENST00000611625 V9GYY9 64 aa8.54□□□□□ -1.04
CDH1-212ENST00000611625 A0A096LNT2 108 aa8.54□□□□□ -1.04
CDH1-212ENST00000611625 PRR4Q16378 134 aa8.54□□□□□ -1.04
CDH1-212ENST00000611625 IGKV4-1P06312 121 aa8.54□□□□□ -1.04
CDH1-212ENST00000611625 C6orf48Q9UBA6 75 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms