RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 TINCRA0A1B0GVN0 87 aa12.53□□□□□ -0.4
SNAPC3-207ENST00000610884 MIAQ16674 131 aa12.53□□□□□ -0.4
SNAPC3-207ENST00000610884 ZFAND6Q6FIF0 208 aa12.53□□□□□ -0.4
SNAPC3-207ENST00000610884 SPANXDQ9BXN6 97 aa12.53□□□□□ -0.4
SNAPC3-207ENST00000610884 SPANXCQ9NY87 97 aa12.53□□□□□ -0.4
SNAPC3-207ENST00000610884 DEFB131BA0A096LNP1 70 aa12.52□□□□□ -0.4
SNAPC3-207ENST00000610884 TRBV10-2A0A0K0K1G8 114 aa12.52□□□□□ -0.41
SNAPC3-207ENST00000610884 TM2D3Q9BRN9 247 aa12.52□□□□□ -0.41
SNAPC3-207ENST00000610884 DNAH9Q9NYC9 4486 aa12.51□□□□□ -0.41
SNAPC3-207ENST00000610884 MRPL23Q16540 153 aaKnown RBP12.51□□□□□ -0.41
SNAPC3-207ENST00000610884 LINC00269Q8N2A0 174 aa12.51□□□□□ -0.41
SNAPC3-207ENST00000610884 DAND5Q8N907 189 aa12.51□□□□□ -0.41
SNAPC3-207ENST00000610884 ZNF625Q96I27 306 aaPredicted RBP12.51□□□□□ -0.41
SNAPC3-207ENST00000610884 ANAPC13Q9BS18 74 aa12.51□□□□□ -0.41
SNAPC3-207ENST00000610884 CSDC2Q9Y534 153 aaKnown RBP12.5□□□□□ -0.41
SNAPC3-207ENST00000610884 LYPD5Q6UWN5 251 aa12.5□□□□□ -0.41
SNAPC3-207ENST00000610884 CLEC2BQ92478 149 aa12.5□□□□□ -0.41
SNAPC3-207ENST00000610884 UBE2WQ96B02 151 aa12.5□□□□□ -0.41
SNAPC3-207ENST00000610884 XCL1P47992 114 aa12.49□□□□□ -0.41
SNAPC3-207ENST00000610884 C2orf82Q6UX34 121 aa12.49□□□□□ -0.41
SNAPC3-207ENST00000610884 C11orf68Q9H3H3 251 aaKnown RBP12.49□□□□□ -0.41
SNAPC3-207ENST00000610884 SNCGO76070 127 aa12.49□□□□□ -0.41
SNAPC3-207ENST00000610884 ANGP03950 147 aaKnown RBP12.49□□□□□ -0.41
SNAPC3-207ENST00000610884 C5orf38Q86SI9 138 aa12.49□□□□□ -0.41
SNAPC3-207ENST00000610884 A0A0U1RRA0 63 aa12.48□□□□□ -0.41
SNAPC3-207ENST00000610884 TRAV8-4A0A0B4J246 113 aa12.48□□□□□ -0.41
SNAPC3-207ENST00000610884 RPL13AP40429 203 aaKnown RBP12.48□□□□□ -0.41
SNAPC3-207ENST00000610884 H7C423 109 aa12.47□□□□□ -0.41
SNAPC3-207ENST00000610884 COX6CP09669 75 aa12.47□□□□□ -0.41
SNAPC3-207ENST00000610884 WFDC10BQ8IUB3 73 aa12.47□□□□□ -0.41
SNAPC3-207ENST00000610884 TGP01266 2768 aa12.46□□□□□ -0.41
SNAPC3-207ENST00000610884 ESRGQ1W209 222 aa12.46□□□□□ -0.42
SNAPC3-207ENST00000610884 LINC00959A0A1B0GUT2 108 aa12.45□□□□□ -0.42
SNAPC3-207ENST00000610884 GAGE2BQ13066 116 aa12.45□□□□□ -0.42
SNAPC3-207ENST00000610884 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
SNAPC3-207ENST00000610884 TOMM7Q9P0U1 55 aa12.45□□□□□ -0.42
SNAPC3-207ENST00000610884 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
SNAPC3-207ENST00000610884 LINC01600Q96MT4 127 aa12.44□□□□□ -0.42
SNAPC3-207ENST00000610884 KLK12Q9UKR0 248 aa12.44□□□□□ -0.42
SNAPC3-207ENST00000610884 SMIM1B2RUZ4 78 aa12.43□□□□□ -0.42
SNAPC3-207ENST00000610884 HERVK_113P63121 156 aa12.43□□□□□ -0.42
SNAPC3-207ENST00000610884 LST1O00453 97 aa12.43□□□□□ -0.42
SNAPC3-207ENST00000610884 H3BT86 120 aa12.42□□□□□ -0.42
SNAPC3-207ENST00000610884 NDUFA1O15239 70 aa12.42□□□□□ -0.42
SNAPC3-207ENST00000610884 TIRAPP58753 221 aa12.42□□□□□ -0.42
SNAPC3-207ENST00000610884 DNAH7Q8WXX0 4024 aa12.42□□□□□ -0.42
SNAPC3-207ENST00000610884 C15orf53Q8NAA6 179 aa12.42□□□□□ -0.42
SNAPC3-207ENST00000610884 TIMM17BO60830 172 aa12.41□□□□□ -0.42
SNAPC3-207ENST00000610884 IFITM1P13164 125 aa12.4□□□□□ -0.42
SNAPC3-207ENST00000610884 LELP1Q5T871 98 aa12.4□□□□□ -0.42
SNAPC3-207ENST00000610884 Q9H8V8 135 aa12.4□□□□□ -0.42
SNAPC3-207ENST00000610884 IGLV5-45A0A087WSX0 123 aa12.4□□□□□ -0.42
SNAPC3-207ENST00000610884 NHLRC4P0CG21 123 aaPredicted RBP12.4□□□□□ -0.42
SNAPC3-207ENST00000610884 REG3AQ06141 175 aa12.4□□□□□ -0.42
SNAPC3-207ENST00000610884 A0A1B0GUV1 79 aa12.39□□□□□ -0.43
SNAPC3-207ENST00000610884 NDUFV3P56181 108 aaKnown RBP12.39□□□□□ -0.43
SNAPC3-207ENST00000610884 TTC32Q5I0X7 151 aa12.39□□□□□ -0.43
SNAPC3-207ENST00000610884 IGHV3OR16-9A0A0B4J2B5 98 aa12.39□□□□□ -0.43
SNAPC3-207ENST00000610884 CIRBPQ14011 172 aaKnown RBP12.38□□□□□ -0.43
SNAPC3-207ENST00000610884 LINC00526Q96FQ7 95 aa12.38□□□□□ -0.43
SNAPC3-207ENST00000610884 LINC00308Q8TCZ7 52 aa12.38□□□□□ -0.43
SNAPC3-207ENST00000610884 CHCHD10Q8WYQ3 142 aaPredicted RBP12.36□□□□□ -0.43
SNAPC3-207ENST00000610884 SS18L2Q9UHA2 77 aa12.36□□□□□ -0.43
SNAPC3-207ENST00000610884 IGLV5-39A0A0G2JS06 123 aa12.35□□□□□ -0.43
SNAPC3-207ENST00000610884 ENHOQ6UWT2 76 aa12.35□□□□□ -0.43
SNAPC3-207ENST00000610884 B5MCH6 92 aa12.35□□□□□ -0.43
SNAPC3-207ENST00000610884 SS18Q15532 418 aa12.34□□□□□ -0.43
SNAPC3-207ENST00000610884 FAM19A3Q7Z5A8 133 aa12.34□□□□□ -0.43
SNAPC3-207ENST00000610884 SOSTDC1Q6X4U4 206 aa12.34□□□□□ -0.43
SNAPC3-207ENST00000610884 FBN3Q75N90 2809 aa12.33□□□□□ -0.43
SNAPC3-207ENST00000610884 TRAV10A0A0B4J240 114 aa12.33□□□□□ -0.44
SNAPC3-207ENST00000610884 MEIG1Q5JSS6 88 aa12.33□□□□□ -0.44
SNAPC3-207ENST00000610884 Q6Q795 121 aa12.33□□□□□ -0.44
SNAPC3-207ENST00000610884 B9D2Q9BPU9 175 aa12.32□□□□□ -0.44
SNAPC3-207ENST00000610884 CCDC179H3BU77 68 aa12.32□□□□□ -0.44
SNAPC3-207ENST00000610884 A0A087WZ39 114 aa12.3□□□□□ -0.44
SNAPC3-207ENST00000610884 COX7A2LO14548 114 aa12.3□□□□□ -0.44
SNAPC3-207ENST00000610884 LINC00588Q9Y4M8 146 aa12.3□□□□□ -0.44
SNAPC3-207ENST00000610884 FAM240AA0A1B0GVK7 77 aa12.3□□□□□ -0.44
SNAPC3-207ENST00000610884 H3BNG1 76 aa12.3□□□□□ -0.44
SNAPC3-207ENST00000610884 COX7B2Q8TF08 81 aa12.29□□□□□ -0.44
SNAPC3-207ENST00000610884 Q9HAA7 133 aa12.29□□□□□ -0.44
SNAPC3-207ENST00000610884 PFN2P35080 140 aa12.28□□□□□ -0.44
SNAPC3-207ENST00000610884 C6orf223Q8N319 242 aa12.28□□□□□ -0.44
SNAPC3-207ENST00000610884 C6orf226Q5I0X4 101 aa12.27□□□□□ -0.45
SNAPC3-207ENST00000610884 STARD9Q9P2P6 4700 aa12.26□□□□□ -0.45
SNAPC3-207ENST00000610884 MALP21145 153 aa12.26□□□□□ -0.45
SNAPC3-207ENST00000610884 COPS9Q8WXC6 57 aa12.26□□□□□ -0.45
SNAPC3-207ENST00000610884 C9orf116Q5BN46 136 aaPredicted RBP12.26□□□□□ -0.45
SNAPC3-207ENST00000610884 CD164L2Q6UWJ8 174 aa12.26□□□□□ -0.45
SNAPC3-207ENST00000610884 PLECQ15149 4684 aaKnown RBP12.25□□□□□ -0.45
SNAPC3-207ENST00000610884 PRR34Q9NV39 138 aa12.25□□□□□ -0.45
SNAPC3-207ENST00000610884 DNAH10Q8IVF4 4471 aa12.25□□□□□ -0.45
SNAPC3-207ENST00000610884 CRPP02741 224 aa12.25□□□□□ -0.45
SNAPC3-207ENST00000610884 FAM218AQ96MZ4 157 aa12.23□□□□□ -0.45
SNAPC3-207ENST00000610884 HERV-K104P63124 156 aa12.22□□□□□ -0.45
SNAPC3-207ENST00000610884 HIGD2BQ4VC39 106 aa12.21□□□□□ -0.45
SNAPC3-207ENST00000610884 C10orf25Q5T742 122 aa12.21□□□□□ -0.45
SNAPC3-207ENST00000610884 TRBV7-7A0A0K0K1E9 115 aa12.2□□□□□ -0.46
SNAPC3-207ENST00000610884 IGKV2D-24A0A075B6R9 120 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms