RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 C2orf48Q96LS8 159 aa11.87□□□□□ -0.51
TNIP1-220ENST00000610535 TRGV4A0A0C4DH28 118 aa11.86□□□□□ -0.51
TNIP1-220ENST00000610535 RPL35AP18077 110 aaKnown RBP11.86□□□□□ -0.51
TNIP1-220ENST00000610535 TRAV25A0A0B4J276 109 aa11.85□□□□□ -0.51
TNIP1-220ENST00000610535 hADV29S1A0JD25 119 aa11.85□□□□□ -0.51
TNIP1-220ENST00000610535 H0YGX0 51 aa11.85□□□□□ -0.51
TNIP1-220ENST00000610535 KRTAP1-3Q8IUG1 177 aa11.85□□□□□ -0.51
TNIP1-220ENST00000610535 OVOL2Q9BRP0 275 aa11.85□□□□□ -0.51
TNIP1-220ENST00000610535 CYSTM1Q9H1C7 97 aa11.85□□□□□ -0.51
TNIP1-220ENST00000610535 CCL24O00175 119 aa11.84□□□□□ -0.51
TNIP1-220ENST00000610535 HIST1H4AP62805 103 aaKnown RBP11.84□□□□□ -0.51
TNIP1-220ENST00000610535 TRBV6-8A0A0A6YYG3 113 aa11.84□□□□□ -0.51
TNIP1-220ENST00000610535 TRBV6-4A0A1B0GX49 114 aa11.84□□□□□ -0.51
TNIP1-220ENST00000610535 IBA57-AS1B1ANH7 110 aa11.84□□□□□ -0.51
TNIP1-220ENST00000610535 OBSCN-AS1Q96MR7 158 aa11.83□□□□□ -0.52
TNIP1-220ENST00000610535 A0A087WZ39 114 aa11.83□□□□□ -0.52
TNIP1-220ENST00000610535 FN1P02751 2386 aaKnown RBP11.83□□□□□ -0.52
TNIP1-220ENST00000610535 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
TNIP1-220ENST00000610535 A0A1B0GX51 115 aa11.82□□□□□ -0.52
TNIP1-220ENST00000610535 ATOX1O00244 68 aa11.82□□□□□ -0.52
TNIP1-220ENST00000610535 C6orf226Q5I0X4 101 aa11.81□□□□□ -0.52
TNIP1-220ENST00000610535 C16orf74Q96GX8 76 aa11.81□□□□□ -0.52
TNIP1-220ENST00000610535 FHL2Q14192 279 aa11.8□□□□□ -0.52
TNIP1-220ENST00000610535 PRR3P79522 188 aaKnown RBP11.8□□□□□ -0.52
TNIP1-220ENST00000610535 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
TNIP1-220ENST00000610535 LINC00959A0A1B0GUT2 108 aa11.79□□□□□ -0.52
TNIP1-220ENST00000610535 XCL1P47992 114 aa11.79□□□□□ -0.52
TNIP1-220ENST00000610535 SS18Q15532 418 aa11.79□□□□□ -0.52
TNIP1-220ENST00000610535 CLPSL2Q6UWE3 100 aa11.78□□□□□ -0.52
TNIP1-220ENST00000610535 CRYGAP11844 174 aa11.78□□□□□ -0.52
TNIP1-220ENST00000610535 Q6JHZ5 121 aa11.78□□□□□ -0.52
TNIP1-220ENST00000610535 LINC01561Q8N1V8 128 aa11.77□□□□□ -0.52
TNIP1-220ENST00000610535 NBEAL2Q6ZNJ1 2754 aa11.77□□□□□ -0.53
TNIP1-220ENST00000610535 CSNK1G2-AS1Q8NCQ2 148 aa11.77□□□□□ -0.53
TNIP1-220ENST00000610535 ESM1Q9NQ30 184 aa11.76□□□□□ -0.53
TNIP1-220ENST00000610535 ORMDL1Q9P0S3 153 aa11.76□□□□□ -0.53
TNIP1-220ENST00000610535 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
TNIP1-220ENST00000610535 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
TNIP1-220ENST00000610535 WFDC9Q8NEX5 89 aa11.75□□□□□ -0.53
TNIP1-220ENST00000610535 SMR3AQ99954 134 aa11.75□□□□□ -0.53
TNIP1-220ENST00000610535 DNAJC9-AS1A6NH13 148 aa11.75□□□□□ -0.53
TNIP1-220ENST00000610535 HIVEP2P31629 2446 aa11.74□□□□□ -0.53
TNIP1-220ENST00000610535 J3KT08 172 aa11.74□□□□□ -0.53
TNIP1-220ENST00000610535 LY6G6DO95868 133 aa11.74□□□□□ -0.53
TNIP1-220ENST00000610535 C19orf73Q9NVV2 129 aa11.74□□□□□ -0.53
TNIP1-220ENST00000610535 USP17L23D6RBM5 183 aa11.73□□□□□ -0.53
TNIP1-220ENST00000610535 KIR2DL5BQ8NHK3 375 aa11.73□□□□□ -0.53
TNIP1-220ENST00000610535 OTOGQ6ZRI0 2925 aa11.73□□□□□ -0.53
TNIP1-220ENST00000610535 RNASE1P07998 156 aaKnown RBP11.73□□□□□ -0.53
TNIP1-220ENST00000610535 HILS1P60008 231 aa11.73□□□□□ -0.53
TNIP1-220ENST00000610535 FAM19A5Q7Z5A7 132 aaPredicted RBP11.73□□□□□ -0.53
TNIP1-220ENST00000610535 NANOS2P60321 138 aaKnown RBP11.73□□□□□ -0.53
TNIP1-220ENST00000610535 VWFP04275 2813 aa11.72□□□□□ -0.53
TNIP1-220ENST00000610535 A0A096LPF7 62 aa11.72□□□□□ -0.53
TNIP1-220ENST00000610535 CCKP06307 115 aa11.72□□□□□ -0.53
TNIP1-220ENST00000610535 SERP2Q8N6R1 65 aa11.71□□□□□ -0.53
TNIP1-220ENST00000610535 TMEM86BQ8N661 226 aa11.71□□□□□ -0.54
TNIP1-220ENST00000610535 KMT2BQ9UMN6 2715 aaPredicted RBP11.7□□□□□ -0.54
TNIP1-220ENST00000610535 GYPEP15421 78 aa11.7□□□□□ -0.54
TNIP1-220ENST00000610535 Q8N814 137 aa11.69□□□□□ -0.54
TNIP1-220ENST00000610535 UPK3BQ9BT76 320 aa11.68□□□□□ -0.54
TNIP1-220ENST00000610535 ANK3Q12955 4377 aaKnown RBP11.68□□□□□ -0.54
TNIP1-220ENST00000610535 Q8IZM0 81 aa11.68□□□□□ -0.54
TNIP1-220ENST00000610535 IGLV1-51P01701 117 aa11.67□□□□□ -0.54
TNIP1-220ENST00000610535 CMC4P56277 68 aaPredicted RBP11.67□□□□□ -0.54
TNIP1-220ENST00000610535 C9orf116Q5BN46 136 aaPredicted RBP11.67□□□□□ -0.54
TNIP1-220ENST00000610535 DSCR8Q96T75 97 aa11.67□□□□□ -0.54
TNIP1-220ENST00000610535 TRAV23DV6A0A075B6W5 121 aa11.66□□□□□ -0.54
TNIP1-220ENST00000610535 FAM19A1Q7Z5A9 133 aa11.66□□□□□ -0.54
TNIP1-220ENST00000610535 LINC00167Q96N53 147 aa11.66□□□□□ -0.54
TNIP1-220ENST00000610535 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.55
TNIP1-220ENST00000610535 LINC01006Q8NI28 216 aa11.65□□□□□ -0.55
TNIP1-220ENST00000610535 TENM1Q9UKZ4 2725 aa11.64□□□□□ -0.55
TNIP1-220ENST00000610535 ENHOQ6UWT2 76 aa11.64□□□□□ -0.55
TNIP1-220ENST00000610535 Q8N3U1 123 aa11.64□□□□□ -0.55
TNIP1-220ENST00000610535 Q8NDZ9 215 aa11.64□□□□□ -0.55
TNIP1-220ENST00000610535 JMJD7-PLA2G4BH0Y9G9 81 aa11.64□□□□□ -0.55
TNIP1-220ENST00000610535 A0A1B0GUV1 79 aa11.63□□□□□ -0.55
TNIP1-220ENST00000610535 J3QKU1 62 aa11.63□□□□□ -0.55
TNIP1-220ENST00000610535 TMEM256-PLSCR3K7ERE1 68 aa11.63□□□□□ -0.55
TNIP1-220ENST00000610535 KIAA0087Q14695 138 aa11.63□□□□□ -0.55
TNIP1-220ENST00000610535 LINC00269Q8N2A0 174 aa11.63□□□□□ -0.55
TNIP1-220ENST00000610535 DPH3Q96FX2 82 aa11.63□□□□□ -0.55
TNIP1-220ENST00000610535 KRTAP1-1Q07627 177 aa11.63□□□□□ -0.55
TNIP1-220ENST00000610535 GHRHP01286 108 aa11.62□□□□□ -0.55
TNIP1-220ENST00000610535 C6orf99Q4VX62 202 aa11.62□□□□□ -0.55
TNIP1-220ENST00000610535 SMIM9A6NGZ8 99 aa11.62□□□□□ -0.55
TNIP1-220ENST00000610535 TMEM258P61165 79 aa11.62□□□□□ -0.55
TNIP1-220ENST00000610535 OXTP01178 125 aa11.61□□□□□ -0.55
TNIP1-220ENST00000610535 RPS28P62857 69 aaKnown RBP11.61□□□□□ -0.55
TNIP1-220ENST00000610535 NDUFC2O95298 119 aa11.59□□□□□ -0.55
TNIP1-220ENST00000610535 S100A7L2Q5SY68 101 aa11.59□□□□□ -0.55
TNIP1-220ENST00000610535 CHCHD10Q8WYQ3 142 aaPredicted RBP11.59□□□□□ -0.55
TNIP1-220ENST00000610535 ATRQ13535 2644 aa11.58□□□□□ -0.56
TNIP1-220ENST00000610535 FLNBO75369 2602 aaKnown RBP11.58□□□□□ -0.56
TNIP1-220ENST00000610535 CD164L2Q6UWJ8 174 aa11.57□□□□□ -0.56
TNIP1-220ENST00000610535 PRO0255Q9UI72 69 aa11.57□□□□□ -0.56
TNIP1-220ENST00000610535 LINC00612Q8N6U2 182 aa11.57□□□□□ -0.56
TNIP1-220ENST00000610535 ANGP03950 147 aaKnown RBP11.56□□□□□ -0.56
TNIP1-220ENST00000610535 COX17Q14061 63 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms