RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 HERVK_113P63121 156 aa9.25□□□□□ -0.93
HDDC2-210ENST00000609574 PAPPA-AS1Q5QFB9 102 aa9.25□□□□□ -0.93
HDDC2-210ENST00000609574 LINC00173Q6ZV60 143 aa9.25□□□□□ -0.93
HDDC2-210ENST00000609574 MAP1LC3AQ9H492 121 aa9.25□□□□□ -0.93
HDDC2-210ENST00000609574 GEMIN7Q9H840 131 aaKnown RBP9.25□□□□□ -0.93
HDDC2-210ENST00000609574 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
HDDC2-210ENST00000609574 CXCL5P42830 114 aa9.24□□□□□ -0.93
HDDC2-210ENST00000609574 FAM229BQ4G0N7 80 aa9.24□□□□□ -0.93
HDDC2-210ENST00000609574 AKAP14Q86UN6 197 aa9.24□□□□□ -0.93
HDDC2-210ENST00000609574 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
HDDC2-210ENST00000609574 RETNLBQ9BQ08 111 aa9.24□□□□□ -0.93
HDDC2-210ENST00000609574 LAMTOR2Q9Y2Q5 125 aa9.24□□□□□ -0.93
HDDC2-210ENST00000609574 A0A1B0GXF2 115 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 NPSP0C0P6 89 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 G0S2P27469 103 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 PEA15Q15121 130 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 TPRXLQ17RH7 258 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 ORMDL2Q53FV1 153 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 C2orf66Q6UXQ4 117 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 NKAPP1Q8N9T2 125 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 ANAPC11Q9NYG5 84 aa9.23□□□□□ -0.93
HDDC2-210ENST00000609574 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
HDDC2-210ENST00000609574 CTAG1AP78358 180 aa9.22□□□□□ -0.93
HDDC2-210ENST00000609574 ZC2HC1BQ5TFG8 222 aa9.22□□□□□ -0.93
HDDC2-210ENST00000609574 ATP5L2Q7Z4Y8 100 aa9.22□□□□□ -0.93
HDDC2-210ENST00000609574 AMELXQ99217 191 aa9.22□□□□□ -0.93
HDDC2-210ENST00000609574 Q8N8P6 123 aa9.21□□□□□ -0.94
HDDC2-210ENST00000609574 PRSS47A8MTI9 375 aa9.2□□□□□ -0.94
HDDC2-210ENST00000609574 FAM19A3Q7Z5A8 133 aa9.2□□□□□ -0.94
HDDC2-210ENST00000609574 K7EMI3 77 aa9.19□□□□□ -0.94
HDDC2-210ENST00000609574 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
HDDC2-210ENST00000609574 KRTAP13-2Q52LG2 175 aa9.18□□□□□ -0.94
HDDC2-210ENST00000609574 MUC17Q685J3 4493 aa9.17□□□□□ -0.94
HDDC2-210ENST00000609574 IGIPA6NJ69 53 aa9.16□□□□□ -0.94
HDDC2-210ENST00000609574 RAB5BP61020 215 aa9.16□□□□□ -0.94
HDDC2-210ENST00000609574 PNRC1Q12796 327 aaPredicted RBP9.16□□□□□ -0.94
HDDC2-210ENST00000609574 LINC00337Q8N6G1 96 aa9.16□□□□□ -0.94
HDDC2-210ENST00000609574 COX7B2Q8TF08 81 aa9.16□□□□□ -0.94
HDDC2-210ENST00000609574 PPDPFQ9H3Y8 114 aa9.16□□□□□ -0.94
HDDC2-210ENST00000609574 PDZD11Q5EBL8 140 aa9.15□□□□□ -0.94
HDDC2-210ENST00000609574 NXT2Q9NPJ8 142 aaKnown RBP9.15□□□□□ -0.94
HDDC2-210ENST00000609574 IGLV5-37A0A075B6J1 123 aa9.14□□□□□ -0.95
HDDC2-210ENST00000609574 C9JQL5 133 aa9.14□□□□□ -0.95
HDDC2-210ENST00000609574 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
HDDC2-210ENST00000609574 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
HDDC2-210ENST00000609574 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
HDDC2-210ENST00000609574 SPAG11AQ6PDA7 123 aa9.13□□□□□ -0.95
HDDC2-210ENST00000609574 KRTAP13-1Q8IUC0 172 aa9.13□□□□□ -0.95
HDDC2-210ENST00000609574 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
HDDC2-210ENST00000609574 ATP5LO75964 103 aa9.12□□□□□ -0.95
HDDC2-210ENST00000609574 LINC01547P58512 204 aaPredicted RBP9.12□□□□□ -0.95
HDDC2-210ENST00000609574 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
HDDC2-210ENST00000609574 SCGB3A1Q96QR1 104 aa9.11□□□□□ -0.95
HDDC2-210ENST00000609574 TINCRA0A1B0GVN0 87 aa9.1□□□□□ -0.95
HDDC2-210ENST00000609574 SMIM1B2RUZ4 78 aa9.1□□□□□ -0.95
HDDC2-210ENST00000609574 SRSF3P84103 164 aaKnown RBP9.1□□□□□ -0.95
HDDC2-210ENST00000609574 GNB1LQ9BYB4 327 aa9.1□□□□□ -0.95
HDDC2-210ENST00000609574 hCG_2014768A0A024R1R8 64 aa9.09□□□□□ -0.95
HDDC2-210ENST00000609574 PRLHP81277 87 aa9.09□□□□□ -0.95
HDDC2-210ENST00000609574 RPL24P83731 157 aaKnown RBP9.09□□□□□ -0.95
HDDC2-210ENST00000609574 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
HDDC2-210ENST00000609574 ERASQ7Z444 233 aa9.09□□□□□ -0.95
HDDC2-210ENST00000609574 TOMM6Q96B49 74 aa9.09□□□□□ -0.95
HDDC2-210ENST00000609574 LINC01549A6NIU2 74 aa9.08□□□□□ -0.96
HDDC2-210ENST00000609574 H3BRM9 83 aa9.08□□□□□ -0.96
HDDC2-210ENST00000609574 CBLN2Q8IUK8 224 aa9.08□□□□□ -0.96
HDDC2-210ENST00000609574 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
HDDC2-210ENST00000609574 ANAPC16Q96DE5 110 aa9.07□□□□□ -0.96
HDDC2-210ENST00000609574 MRPL18Q9H0U6 180 aaKnown RBP9.07□□□□□ -0.96
HDDC2-210ENST00000609574 SPINK8P0C7L1 97 aa9.06□□□□□ -0.96
HDDC2-210ENST00000609574 PFN2P35080 140 aa9.06□□□□□ -0.96
HDDC2-210ENST00000609574 TMEM126AQ9H061 195 aa9.06□□□□□ -0.96
HDDC2-210ENST00000609574 SCO1O75880 301 aa9.05□□□□□ -0.96
HDDC2-210ENST00000609574 PLEKHB2Q96CS7 222 aa9.05□□□□□ -0.96
HDDC2-210ENST00000609574 IGLV5-45A0A087WSX0 123 aa9.04□□□□□ -0.96
HDDC2-210ENST00000609574 TMEM238C9JI98 176 aa9.04□□□□□ -0.96
HDDC2-210ENST00000609574 C3orf22Q8N5N4 141 aa9.04□□□□□ -0.96
HDDC2-210ENST00000609574 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
HDDC2-210ENST00000609574 HIGD2AQ9BW72 106 aa9.03□□□□□ -0.96
HDDC2-210ENST00000609574 CST9LQ9H4G1 147 aa9.03□□□□□ -0.96
HDDC2-210ENST00000609574 ZNF706Q9Y5V0 76 aaPredicted RBP9.03□□□□□ -0.96
HDDC2-210ENST00000609574 PMVKQ15126 192 aa9.02□□□□□ -0.97
HDDC2-210ENST00000609574 RAB14P61106 215 aa9.01□□□□□ -0.97
HDDC2-210ENST00000609574 COX17Q14061 63 aa9.01□□□□□ -0.97
HDDC2-210ENST00000609574 ASB16-AS1Q495Z4 193 aa9.01□□□□□ -0.97
HDDC2-210ENST00000609574 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
HDDC2-210ENST00000609574 A0A1B0GVG6 124 aa9□□□□□ -0.97
HDDC2-210ENST00000609574 M0R378 163 aa9□□□□□ -0.97
HDDC2-210ENST00000609574 VPREB1P12018 145 aa9□□□□□ -0.97
HDDC2-210ENST00000609574 ADCYAP1P18509 176 aa9□□□□□ -0.97
HDDC2-210ENST00000609574 SND1-IT1Q9HBX3 110 aa9□□□□□ -0.97
HDDC2-210ENST00000609574 LCE2DQ5TA82 110 aaPredicted RBP8.99□□□□□ -0.97
HDDC2-210ENST00000609574 ERG28Q9UKR5 140 aa8.99□□□□□ -0.97
HDDC2-210ENST00000609574 SPRR4Q96PI1 79 aa8.98□□□□□ -0.97
HDDC2-210ENST00000609574 SPINK1P00995 79 aa8.97□□□□□ -0.97
HDDC2-210ENST00000609574 KIAA1644Q3SXP7 199 aa8.97□□□□□ -0.97
HDDC2-210ENST00000609574 KRTAP13-3Q3SY46 172 aa8.97□□□□□ -0.97
HDDC2-210ENST00000609574 SFTA2Q6UW10 78 aa8.97□□□□□ -0.97
HDDC2-210ENST00000609574 NDUFA6P56556 154 aa8.96□□□□□ -0.98
HDDC2-210ENST00000609574 Q8NBF4 154 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms