RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 PRSS2P07478 247 aa7.34□□□□□ -1.23
CTCFL-214ENST00000608108 HIGD2BQ4VC39 106 aa7.34□□□□□ -1.23
CTCFL-214ENST00000608108 GVQW2A0A096LPI5 108 aaPredicted RBP7.34□□□□□ -1.24
CTCFL-214ENST00000608108 ZNF561-AS1K7EIQ3 104 aa7.34□□□□□ -1.24
CTCFL-214ENST00000608108 LGALS3P17931 250 aaKnown RBP7.34□□□□□ -1.24
CTCFL-214ENST00000608108 WFDC2Q14508 124 aa7.34□□□□□ -1.24
CTCFL-214ENST00000608108 C6orf226Q5I0X4 101 aa7.33□□□□□ -1.24
CTCFL-214ENST00000608108 LINC00526Q96FQ7 95 aa7.33□□□□□ -1.24
CTCFL-214ENST00000608108 RYR3Q15413 4870 aa7.33□□□□□ -1.24
CTCFL-214ENST00000608108 LRCOL1A6NCL2 159 aa7.32□□□□□ -1.24
CTCFL-214ENST00000608108 KIAA0087Q14695 138 aa7.32□□□□□ -1.24
CTCFL-214ENST00000608108 PCP2Q8IVA1 136 aa7.32□□□□□ -1.24
CTCFL-214ENST00000608108 TTTY13Q9BZ97 58 aa7.32□□□□□ -1.24
CTCFL-214ENST00000608108 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
CTCFL-214ENST00000608108 CXCL5P42830 114 aa7.31□□□□□ -1.24
CTCFL-214ENST00000608108 CKS1BP61024 79 aa7.31□□□□□ -1.24
CTCFL-214ENST00000608108 C14orf177Q52M58 125 aa7.31□□□□□ -1.24
CTCFL-214ENST00000608108 C2orf82Q6UX34 121 aa7.31□□□□□ -1.24
CTCFL-214ENST00000608108 NDUFA12Q9UI09 145 aa7.31□□□□□ -1.24
CTCFL-214ENST00000608108 ZNF815PA8K554 130 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 RTL8CO15255 209 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 NTN5Q8WTR8 489 aaPredicted RBP7.3□□□□□ -1.24
CTCFL-214ENST00000608108 C14orf144Q96I85 54 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 A0A087WTM6 91 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 NDUFA1O15239 70 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 COX8AP10176 69 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 TNP2Q05952 138 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 SFTA2Q6UW10 78 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
CTCFL-214ENST00000608108 C2orf48Q96LS8 159 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 CAMK2N2Q96S95 79 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 TP73-AS1Q9UF72 201 aa7.3□□□□□ -1.24
CTCFL-214ENST00000608108 MYMXA0A1B0GTQ4 84 aa7.29□□□□□ -1.24
CTCFL-214ENST00000608108 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
CTCFL-214ENST00000608108 PKD1P98161 4303 aa7.28□□□□□ -1.24
CTCFL-214ENST00000608108 UNQ6190/PRO20217Q6UXQ8 127 aa7.28□□□□□ -1.24
CTCFL-214ENST00000608108 BOD1L2Q8IYS8 172 aa7.28□□□□□ -1.24
CTCFL-214ENST00000608108 Q8N814 137 aa7.28□□□□□ -1.24
CTCFL-214ENST00000608108 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.27□□□□□ -1.25
CTCFL-214ENST00000608108 SYCNQ0VAF6 134 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 C10orf25Q5T742 122 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 SLC25A34Q6PIV7 304 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 PRO1933Q9H354 126 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 F8WDY8 70 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 DLEU1O43261 78 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 HERV-K104P63124 156 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 SCGB1D4Q6XE38 83 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 Q6ZRU5 148 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
CTCFL-214ENST00000608108 A0A0J9YXY3 114 aa7.26□□□□□ -1.25
CTCFL-214ENST00000608108 TRBV30A0A0K0K1B3 111 aa7.26□□□□□ -1.25
CTCFL-214ENST00000608108 EREGO14944 169 aa7.26□□□□□ -1.25
CTCFL-214ENST00000608108 SLPIP03973 132 aa7.26□□□□□ -1.25
CTCFL-214ENST00000608108 C6orf48Q9UBA6 75 aa7.26□□□□□ -1.25
CTCFL-214ENST00000608108 UQCR10Q9UDW1 63 aa7.26□□□□□ -1.25
CTCFL-214ENST00000608108 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
CTCFL-214ENST00000608108 TSTD3H0UI37 97 aa7.25□□□□□ -1.25
CTCFL-214ENST00000608108 CNBPP62633 177 aaKnown RBP7.25□□□□□ -1.25
CTCFL-214ENST00000608108 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
CTCFL-214ENST00000608108 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.24□□□□□ -1.25
CTCFL-214ENST00000608108 C9orf116Q5BN46 136 aaPredicted RBP7.24□□□□□ -1.25
CTCFL-214ENST00000608108 ERG28Q9UKR5 140 aa7.24□□□□□ -1.25
CTCFL-214ENST00000608108 PKHD1P08F94 4074 aa7.23□□□□□ -1.25
CTCFL-214ENST00000608108 A6NJY4 79 aa7.23□□□□□ -1.25
CTCFL-214ENST00000608108 PFN2P35080 140 aa7.23□□□□□ -1.25
CTCFL-214ENST00000608108 KRTAP9-2Q9BYQ4 174 aa7.23□□□□□ -1.25
CTCFL-214ENST00000608108 A0A0U1RRA0 63 aa7.23□□□□□ -1.25
CTCFL-214ENST00000608108 SMIM13P0DJ93 91 aa7.23□□□□□ -1.25
CTCFL-214ENST00000608108 CIRBPQ14011 172 aaKnown RBP7.23□□□□□ -1.25
CTCFL-214ENST00000608108 LINC00336Q6ZUF6 198 aa7.23□□□□□ -1.25
CTCFL-214ENST00000608108 MIEN1Q9BRT3 115 aa7.23□□□□□ -1.25
CTCFL-214ENST00000608108 LINC00587B1AMM8 73 aa7.22□□□□□ -1.25
CTCFL-214ENST00000608108 TMEM238C9JI98 176 aa7.22□□□□□ -1.25
CTCFL-214ENST00000608108 LINC00158P58513 81 aa7.22□□□□□ -1.25
CTCFL-214ENST00000608108 COX17Q14061 63 aa7.22□□□□□ -1.25
CTCFL-214ENST00000608108 RNF151Q2KHN1 245 aa7.22□□□□□ -1.25
CTCFL-214ENST00000608108 C2orf91Q6ZV80 131 aa7.22□□□□□ -1.25
CTCFL-214ENST00000608108 TIMM17BO60830 172 aa7.21□□□□□ -1.26
CTCFL-214ENST00000608108 FUSP35637 526 aaKnown RBP eCLIP7.21□□□□□ -1.26
CTCFL-214ENST00000608108 DAND5Q8N907 189 aa7.21□□□□□ -1.26
CTCFL-214ENST00000608108 LITAFQ99732 161 aa7.21□□□□□ -1.26
CTCFL-214ENST00000608108 IGLV5-52A0A0A0MRZ9 124 aa7.2□□□□□ -1.26
CTCFL-214ENST00000608108 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
CTCFL-214ENST00000608108 NDUFC2-KCTD14E9PQ53 114 aa7.2□□□□□ -1.26
CTCFL-214ENST00000608108 HNRNPA3P51991 378 aaKnown RBP7.2□□□□□ -1.26
CTCFL-214ENST00000608108 ADAMTSL4-AS1Q5T5F5 129 aa7.2□□□□□ -1.26
CTCFL-214ENST00000608108 HIGD1BQ9P298 99 aa7.2□□□□□ -1.26
CTCFL-214ENST00000608108 RPL18AQ02543 176 aaKnown RBP7.19□□□□□ -1.26
CTCFL-214ENST00000608108 MIR7-3HGQ8N6C7 128 aa7.19□□□□□ -1.26
CTCFL-214ENST00000608108 C9orf163Q8N9P6 203 aa7.19□□□□□ -1.26
CTCFL-214ENST00000608108 PCP4L1A6NKN8 68 aa7.19□□□□□ -1.26
CTCFL-214ENST00000608108 FAM229AH3BQW9 127 aa7.19□□□□□ -1.26
CTCFL-214ENST00000608108 SPANXB1Q9NS25 103 aaPredicted RBP7.19□□□□□ -1.26
CTCFL-214ENST00000608108 DNAH8Q96JB1 4490 aa7.18□□□□□ -1.26
CTCFL-214ENST00000608108 LOC107984640A0A0U1RRK4 108 aa7.18□□□□□ -1.26
CTCFL-214ENST00000608108 TLX1NBP0CAT3 122 aa7.18□□□□□ -1.26
CTCFL-214ENST00000608108 KRTAP10-2P60368 255 aa7.18□□□□□ -1.26
CTCFL-214ENST00000608108 SRSF9Q13242 221 aaKnown RBP eCLIP7.18□□□□□ -1.26
CTCFL-214ENST00000608108 LINC01620Q4KN68 170 aa7.18□□□□□ -1.26
CTCFL-214ENST00000608108 Q6ZRP5 223 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms