RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 POLR2KP53803 58 aaKnown RBP3.61□□□□□ -1.83
SCARNA15-201ENST00000607520 RPL32P62910 135 aaKnown RBP3.61□□□□□ -1.83
SCARNA15-201ENST00000607520 LINC00588Q9Y4M8 146 aa3.61□□□□□ -1.83
SCARNA15-201ENST00000607520 TRBV6-5A0A0K0K1A5 114 aa3.61□□□□□ -1.83
SCARNA15-201ENST00000607520 MUSTN1Q8IVN3 82 aa3.61□□□□□ -1.83
SCARNA15-201ENST00000607520 LRBAP50851 2863 aa3.61□□□□□ -1.83
SCARNA15-201ENST00000607520 ZANQ9Y493 2812 aa3.61□□□□□ -1.83
SCARNA15-201ENST00000607520 LINC00315P59091 139 aa3.61□□□□□ -1.83
SCARNA15-201ENST00000607520 LCE6AA0A183 80 aa3.6□□□□□ -1.83
SCARNA15-201ENST00000607520 PRSS47A8MTI9 375 aa3.6□□□□□ -1.83
SCARNA15-201ENST00000607520 CD164L2Q6UWJ8 174 aa3.6□□□□□ -1.83
SCARNA15-201ENST00000607520 ZFHX3Q15911 3703 aa3.6□□□□□ -1.83
SCARNA15-201ENST00000607520 UBE2AP49459 152 aa3.6□□□□□ -1.83
SCARNA15-201ENST00000607520 APLNQ9ULZ1 77 aa3.6□□□□□ -1.83
SCARNA15-201ENST00000607520 IGLV4-69A0A075B6H9 119 aa3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 USP17L23D6RBM5 183 aa3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 Q6ZUT4 128 aa3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 FAM19A4Q96LR4 140 aa3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 IGLV4-3A0A075B6K6 122 aa3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 A0A087WZ39 114 aa3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 LOC107984640A0A0U1RRK4 108 aa3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 GIG44P09565 113 aaPredicted RBP3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 IFITM1P13164 125 aa3.59□□□□□ -1.83
SCARNA15-201ENST00000607520 LRCOL1A6NCL2 159 aa3.59□□□□□ -1.84
SCARNA15-201ENST00000607520 COX7B2Q8TF08 81 aa3.59□□□□□ -1.84
SCARNA15-201ENST00000607520 F8WEM9 126 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 ETDCA0A1B0GVM5 59 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 IGIPA6NJ69 53 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 IBA57-AS1B1ANH7 110 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 ZNF22P17026 224 aaPredicted RBP3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 HERV-K104P63124 156 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 UFSP1Q6NVU6 142 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 LINC00959A0A1B0GUT2 108 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 TSPAN13O95857 204 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 TSHBP01222 138 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 NTN5Q8WTR8 489 aaPredicted RBP3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 TEN1Q86WV5 123 aa3.58□□□□□ -1.84
SCARNA15-201ENST00000607520 A0A0J9YXY3 114 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 A0A1B0GUV1 79 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 TMEM223A0PJW6 202 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 PYGO1Q9Y3Y4 419 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 TINCRA0A1B0GVN0 87 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 ANKRD29Q8N6D5 301 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 SPANXB1Q9NS25 103 aaPredicted RBP3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 LINC01546A6NGU7 62 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 FOXI1Q12951 378 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 LCE2CQ5TA81 110 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 DAND5Q8N907 189 aa3.57□□□□□ -1.84
SCARNA15-201ENST00000607520 DNAH10OSP0CZ25 163 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 LINC01620Q4KN68 170 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 CDKN2A-AS1Q9UH64 79 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 TRAV13-2A0A0B4J235 113 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 TCL1BO95988 128 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 PLA2G1BP04054 148 aaKnown RBP3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 Q6ZSN1 163 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 KIF25-AS1Q9Y6Z4 181 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 A0A0B4J2C4 111 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 SCGB1A1P11684 91 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 UBE2D1P51668 147 aa3.56□□□□□ -1.84
SCARNA15-201ENST00000607520 PDZD2O15018 2839 aa3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 CDC42SE2Q9NRR3 84 aa3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 STAB2Q8WWQ8 2551 aa3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 MXRA5Q9NR99 2828 aa3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 MRPS36P82909 103 aaKnown RBP3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 TMEM126AQ9H061 195 aa3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 F8WDY8 70 aa3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 RTL8CO15255 209 aa3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 LINC00612Q8N6U2 182 aa3.55□□□□□ -1.84
SCARNA15-201ENST00000607520 INAFM2P0DMQ5 153 aa3.54□□□□□ -1.84
SCARNA15-201ENST00000607520 FAM19A5Q7Z5A7 132 aaPredicted RBP3.54□□□□□ -1.84
SCARNA15-201ENST00000607520 UPK3BQ9BT76 320 aa3.54□□□□□ -1.84
SCARNA15-201ENST00000607520 IGLV4-60A0A075B6I1 120 aa3.54□□□□□ -1.84
SCARNA15-201ENST00000607520 TRBV10-2A0A0K0K1G8 114 aa3.54□□□□□ -1.84
SCARNA15-201ENST00000607520 SND1-IT1Q9HBX3 110 aa3.54□□□□□ -1.84
SCARNA15-201ENST00000607520 HRNRQ86YZ3 2850 aaPredicted RBP3.54□□□□□ -1.84
SCARNA15-201ENST00000607520 BAALC-AS2P0C853 105 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 LCE2AQ5TA79 106 aaPredicted RBP3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 GAGE2AQ6NT46 116 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 LINC00526Q96FQ7 95 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 UBE2D4Q9Y2X8 147 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 COX6A2Q02221 97 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 CLEC2BQ92478 149 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 CSDC2Q9Y534 153 aaKnown RBP3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 FBN2P35556 2912 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 H3BT86 120 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 C2orf48Q96LS8 159 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 OTOGQ6ZRI0 2925 aa3.53□□□□□ -1.84
SCARNA15-201ENST00000607520 TSPEAR-AS2P59090 65 aa3.53□□□□□ -1.85
SCARNA15-201ENST00000607520 PLAC8L1A1L4L8 177 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 EIF4EBP3O60516 100 aaPredicted RBP3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 MIR7-3HGQ8N6C7 128 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 TRBV30A0A0K0K1B3 111 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 CDK2AP2O75956 126 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 A0A087WTM6 91 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 TRIAP1O43715 76 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 LINC00308Q8TCZ7 52 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 HIGD2AQ9BW72 106 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 XAGE1AQ9HD64 81 aa3.52□□□□□ -1.85
SCARNA15-201ENST00000607520 H0YGX0 51 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms