RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 NDUFA5Q16718 116 aa13.19□□□□□ -0.3
TMEM248-207ENST00000607045 AMELXQ99217 191 aa13.19□□□□□ -0.3
TMEM248-207ENST00000607045 GEMIN7Q9H840 131 aaKnown RBP13.19□□□□□ -0.3
TMEM248-207ENST00000607045 SMCO4Q9NRQ5 59 aa13.19□□□□□ -0.3
TMEM248-207ENST00000607045 IGIPA6NJ69 53 aa13.18□□□□□ -0.3
TMEM248-207ENST00000607045 TOMM6Q96B49 74 aa13.18□□□□□ -0.3
TMEM248-207ENST00000607045 SCGB3A1Q96QR1 104 aa13.18□□□□□ -0.3
TMEM248-207ENST00000607045 CARHSP1Q9Y2V2 147 aaKnown RBP13.18□□□□□ -0.3
TMEM248-207ENST00000607045 TRBV30A0A0K0K1B3 111 aa13.17□□□□□ -0.3
TMEM248-207ENST00000607045 CKS1BP61024 79 aa13.17□□□□□ -0.3
TMEM248-207ENST00000607045 C9orf129Q5T035 196 aaKnown RBP13.17□□□□□ -0.3
TMEM248-207ENST00000607045 ERASQ7Z444 233 aa13.17□□□□□ -0.3
TMEM248-207ENST00000607045 FABP9Q0Z7S8 132 aa13.16□□□□□ -0.3
TMEM248-207ENST00000607045 C10orf91Q5T1B1 145 aa13.16□□□□□ -0.3
TMEM248-207ENST00000607045 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
TMEM248-207ENST00000607045 M0QXV9 152 aa13.15□□□□□ -0.3
TMEM248-207ENST00000607045 KRTAP1-4P0C5Y4 121 aa13.15□□□□□ -0.3
TMEM248-207ENST00000607045 C6orf226Q5I0X4 101 aa13.15□□□□□ -0.3
TMEM248-207ENST00000607045 MRPL18Q9H0U6 180 aaKnown RBP13.15□□□□□ -0.3
TMEM248-207ENST00000607045 NDUFC2-KCTD14E9PQ53 114 aa13.14□□□□□ -0.31
TMEM248-207ENST00000607045 UBE2BP63146 152 aa13.14□□□□□ -0.31
TMEM248-207ENST00000607045 LINC00173Q6ZV60 143 aa13.14□□□□□ -0.31
TMEM248-207ENST00000607045 ALKBH7Q9BT30 221 aaPredicted RBP13.14□□□□□ -0.31
TMEM248-207ENST00000607045 TOMM7Q9P0U1 55 aa13.14□□□□□ -0.31
TMEM248-207ENST00000607045 FAM19A3Q7Z5A8 133 aa13.13□□□□□ -0.31
TMEM248-207ENST00000607045 SNAPINO95295 136 aa13.11□□□□□ -0.31
TMEM248-207ENST00000607045 APOC3P02656 99 aa13.1□□□□□ -0.31
TMEM248-207ENST00000607045 Q8IZM0 81 aa13.1□□□□□ -0.31
TMEM248-207ENST00000607045 SVBPQ8N300 66 aa13.1□□□□□ -0.31
TMEM248-207ENST00000607045 IGLV1-50A0A075B6I6 118 aa13.09□□□□□ -0.31
TMEM248-207ENST00000607045 LINC00469Q8N7U9 141 aa13.09□□□□□ -0.31
TMEM248-207ENST00000607045 TRAPPC1Q9Y5R8 145 aa13.09□□□□□ -0.31
TMEM248-207ENST00000607045 LINC01546A6NGU7 62 aa13.08□□□□□ -0.32
TMEM248-207ENST00000607045 CXCL5P42830 114 aa13.07□□□□□ -0.32
TMEM248-207ENST00000607045 CDKN2A-AS1Q9UH64 79 aa13.07□□□□□ -0.32
TMEM248-207ENST00000607045 TINCRA0A1B0GVN0 87 aa13.06□□□□□ -0.32
TMEM248-207ENST00000607045 PMVKQ15126 192 aa13.06□□□□□ -0.32
TMEM248-207ENST00000607045 C22orf24Q9Y442 160 aa13.06□□□□□ -0.32
TMEM248-207ENST00000607045 MUC2Q02817 5179 aa13.05□□□□□ -0.32
TMEM248-207ENST00000607045 XAGE1AQ9HD64 81 aa13.05□□□□□ -0.32
TMEM248-207ENST00000607045 F8VRH5 84 aa13.04□□□□□ -0.32
TMEM248-207ENST00000607045 RAB5BP61020 215 aa13.04□□□□□ -0.32
TMEM248-207ENST00000607045 H3BRM9 83 aa13.03□□□□□ -0.32
TMEM248-207ENST00000607045 PDZD11Q5EBL8 140 aa13.03□□□□□ -0.32
TMEM248-207ENST00000607045 CST9LQ9H4G1 147 aa13.03□□□□□ -0.32
TMEM248-207ENST00000607045 ZNF861PO60384 105 aa13.02□□□□□ -0.33
TMEM248-207ENST00000607045 LINC00614P0C842 121 aa13.01□□□□□ -0.33
TMEM248-207ENST00000607045 NDUFA6P56556 154 aa13□□□□□ -0.33
TMEM248-207ENST00000607045 PRR4Q16378 134 aa12.99□□□□□ -0.33
TMEM248-207ENST00000607045 COX7B2Q8TF08 81 aa12.99□□□□□ -0.33
TMEM248-207ENST00000607045 HBDP02042 147 aa12.98□□□□□ -0.33
TMEM248-207ENST00000607045 C18orf32Q8TCD1 76 aa12.98□□□□□ -0.33
TMEM248-207ENST00000607045 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
TMEM248-207ENST00000607045 SMIM1B2RUZ4 78 aa12.97□□□□□ -0.33
TMEM248-207ENST00000607045 RPL13AP40429 203 aaKnown RBP12.97□□□□□ -0.33
TMEM248-207ENST00000607045 LBHQ53QV2 105 aaPredicted RBP12.97□□□□□ -0.33
TMEM248-207ENST00000607045 ATP5LO75964 103 aa12.96□□□□□ -0.33
TMEM248-207ENST00000607045 NUPR1O60356 82 aa12.95□□□□□ -0.34
TMEM248-207ENST00000607045 TSPAN13O95857 204 aa12.93□□□□□ -0.34
TMEM248-207ENST00000607045 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
TMEM248-207ENST00000607045 MRPL55Q7Z7F7 128 aaKnown RBP12.93□□□□□ -0.34
TMEM248-207ENST00000607045 RPL37AP8A6NKH3 93 aa12.91□□□□□ -0.34
TMEM248-207ENST00000607045 IGLC3P0DOY3 106 aa12.91□□□□□ -0.34
TMEM248-207ENST00000607045 LINC00167Q96N53 147 aa12.91□□□□□ -0.34
TMEM248-207ENST00000607045 TP73-AS1Q9UF72 201 aa12.91□□□□□ -0.34
TMEM248-207ENST00000607045 A0A087X002 238 aa12.9□□□□□ -0.34
TMEM248-207ENST00000607045 BCE1O60756 84 aa12.89□□□□□ -0.35
TMEM248-207ENST00000607045 PMCHL1Q16048 86 aa12.88□□□□□ -0.35
TMEM248-207ENST00000607045 SFTA2Q6UW10 78 aa12.88□□□□□ -0.35
TMEM248-207ENST00000607045 BAGE3Q86Y29 109 aa12.88□□□□□ -0.35
TMEM248-207ENST00000607045 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
TMEM248-207ENST00000607045 ANAPC11Q9NYG5 84 aa12.88□□□□□ -0.35
TMEM248-207ENST00000607045 GAGE10A6NGK3 116 aa12.87□□□□□ -0.35
TMEM248-207ENST00000607045 RPL28P46779 137 aaKnown RBP12.87□□□□□ -0.35
TMEM248-207ENST00000607045 A0A096LNJ9 63 aa12.86□□□□□ -0.35
TMEM248-207ENST00000607045 URB1-AS1Q96HZ7 61 aa12.86□□□□□ -0.35
TMEM248-207ENST00000607045 TMEM170BQ5T4T1 132 aa12.85□□□□□ -0.35
TMEM248-207ENST00000607045 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
TMEM248-207ENST00000607045 CRYGAP11844 174 aa12.83□□□□□ -0.36
TMEM248-207ENST00000607045 ZNF22P17026 224 aaPredicted RBP12.83□□□□□ -0.36
TMEM248-207ENST00000607045 TYMSOSQ8TAI1 123 aa12.83□□□□□ -0.36
TMEM248-207ENST00000607045 CHTOPQ9Y3Y2 248 aaKnown RBP12.83□□□□□ -0.36
TMEM248-207ENST00000607045 IGLV5-39A0A0G2JS06 123 aa12.82□□□□□ -0.36
TMEM248-207ENST00000607045 HSBP1O75506 76 aa12.82□□□□□ -0.36
TMEM248-207ENST00000607045 SCO1O75880 301 aa12.81□□□□□ -0.36
TMEM248-207ENST00000607045 PFN2P35080 140 aa12.81□□□□□ -0.36
TMEM248-207ENST00000607045 COX17Q14061 63 aa12.81□□□□□ -0.36
TMEM248-207ENST00000607045 IFI27L1Q96BM0 104 aa12.8□□□□□ -0.36
TMEM248-207ENST00000607045 YPEL4Q96NS1 127 aa12.8□□□□□ -0.36
TMEM248-207ENST00000607045 IGLV5-37A0A075B6J1 123 aa12.79□□□□□ -0.36
TMEM248-207ENST00000607045 KRTAP13-2Q52LG2 175 aa12.79□□□□□ -0.36
TMEM248-207ENST00000607045 KRTAP13-1Q8IUC0 172 aa12.79□□□□□ -0.36
TMEM248-207ENST00000607045 C11orf86A6NJI1 115 aa12.78□□□□□ -0.36
TMEM248-207ENST00000607045 CBLN2Q8IUK8 224 aa12.78□□□□□ -0.36
TMEM248-207ENST00000607045 ERG28Q9UKR5 140 aa12.78□□□□□ -0.36
TMEM248-207ENST00000607045 TRAV12-1A0A0B4J245 112 aa12.77□□□□□ -0.37
TMEM248-207ENST00000607045 UBE2AP49459 152 aa12.76□□□□□ -0.37
TMEM248-207ENST00000607045 RPL24P83731 157 aaKnown RBP12.76□□□□□ -0.37
TMEM248-207ENST00000607045 IGKV2-28A0A075B6P5 120 aa12.75□□□□□ -0.37
TMEM248-207ENST00000607045 IGKV2D-28P01615 120 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms