RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CKS1BP61024 79 aa14.45□□□□□ -0.1
USP6NL-204ENST00000606752 RPL24P83731 157 aaKnown RBP14.45□□□□□ -0.1
USP6NL-204ENST00000606752 A0A1B0GWB2 263 aa14.44□□□□□ -0.1
USP6NL-204ENST00000606752 CXCL5P42830 114 aa14.44□□□□□ -0.1
USP6NL-204ENST00000606752 A0A0U1RRA0 63 aa14.43□□□□□ -0.1
USP6NL-204ENST00000606752 IFITM1P13164 125 aa14.43□□□□□ -0.1
USP6NL-204ENST00000606752 COX11Q9Y6N1 276 aa14.43□□□□□ -0.1
USP6NL-204ENST00000606752 DYNC2H1Q8NCM8 4307 aaKnown RBP14.43□□□□□ -0.1
USP6NL-204ENST00000606752 IGKV2D-24A0A075B6R9 120 aa14.43□□□□□ -0.1
USP6NL-204ENST00000606752 K7ERJ3 54 aa14.43□□□□□ -0.1
USP6NL-204ENST00000606752 UBE2DNLQ8IWF7 75 aa14.43□□□□□ -0.1
USP6NL-204ENST00000606752 DAND5Q8N907 189 aa14.43□□□□□ -0.1
USP6NL-204ENST00000606752 SPAG11BQ08648 103 aa14.42□□□□□ -0.1
USP6NL-204ENST00000606752 C2orf82Q6UX34 121 aa14.42□□□□□ -0.1
USP6NL-204ENST00000606752 Q9HAA7 133 aa14.42□□□□□ -0.1
USP6NL-204ENST00000606752 A4D1N5 150 aa14.41□□□□□ -0.1
USP6NL-204ENST00000606752 RAB37Q96AX2 223 aa14.41□□□□□ -0.1
USP6NL-204ENST00000606752 CFC1BP0CG36 223 aa14.38□□□□□ -0.11
USP6NL-204ENST00000606752 CFC1P0CG37 223 aa14.38□□□□□ -0.11
USP6NL-204ENST00000606752 LINC00158P58513 81 aa14.38□□□□□ -0.11
USP6NL-204ENST00000606752 NPC2P61916 151 aa14.38□□□□□ -0.11
USP6NL-204ENST00000606752 LINC00308Q8TCZ7 52 aa14.38□□□□□ -0.11
USP6NL-204ENST00000606752 COPS9Q8WXC6 57 aa14.38□□□□□ -0.11
USP6NL-204ENST00000606752 ERG28Q9UKR5 140 aa14.38□□□□□ -0.11
USP6NL-204ENST00000606752 C9orf118A6NHY6 69 aa14.38□□□□□ -0.11
USP6NL-204ENST00000606752 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.37□□□□□ -0.11
USP6NL-204ENST00000606752 RMI2Q96E14 147 aa14.37□□□□□ -0.11
USP6NL-204ENST00000606752 EIF4EBP3O60516 100 aaPredicted RBP14.36□□□□□ -0.11
USP6NL-204ENST00000606752 FBN3Q75N90 2809 aa14.36□□□□□ -0.11
USP6NL-204ENST00000606752 PFN2P35080 140 aa14.36□□□□□ -0.11
USP6NL-204ENST00000606752 C6orf223Q8N319 242 aa14.36□□□□□ -0.11
USP6NL-204ENST00000606752 MIR7-3HGQ8N6C7 128 aa14.36□□□□□ -0.11
USP6NL-204ENST00000606752 NTN5Q8WTR8 489 aaPredicted RBP14.35□□□□□ -0.11
USP6NL-204ENST00000606752 LINC00526Q96FQ7 95 aa14.35□□□□□ -0.11
USP6NL-204ENST00000606752 PPDPFQ9H3Y8 114 aa14.35□□□□□ -0.11
USP6NL-204ENST00000606752 ZNF561-AS1K7EIQ3 104 aa14.34□□□□□ -0.11
USP6NL-204ENST00000606752 UNQ6190/PRO20217Q6UXQ8 127 aa14.34□□□□□ -0.11
USP6NL-204ENST00000606752 SOSTDC1Q6X4U4 206 aa14.34□□□□□ -0.11
USP6NL-204ENST00000606752 C15orf56Q8N910 161 aa14.34□□□□□ -0.11
USP6NL-204ENST00000606752 A0A0B4J2C4 111 aa14.33□□□□□ -0.12
USP6NL-204ENST00000606752 H3BUT2 72 aa14.33□□□□□ -0.12
USP6NL-204ENST00000606752 COX17Q14061 63 aa14.33□□□□□ -0.12
USP6NL-204ENST00000606752 CSMD3Q7Z407 3707 aa14.33□□□□□ -0.12
USP6NL-204ENST00000606752 DNAH7Q8WXX0 4024 aa14.32□□□□□ -0.12
USP6NL-204ENST00000606752 HIGD2BQ4VC39 106 aa14.31□□□□□ -0.12
USP6NL-204ENST00000606752 C10orf25Q5T742 122 aa14.31□□□□□ -0.12
USP6NL-204ENST00000606752 PRO1854Q9UHT4 67 aa14.31□□□□□ -0.12
USP6NL-204ENST00000606752 NAA38Q9BRA0 125 aaKnown RBP14.31□□□□□ -0.12
USP6NL-204ENST00000606752 KRTAP1-5Q9BYS1 174 aa14.3□□□□□ -0.12
USP6NL-204ENST00000606752 PGPEP1Q9NXJ5 209 aa14.29□□□□□ -0.12
USP6NL-204ENST00000606752 GVQW2A0A096LPI5 108 aaPredicted RBP14.29□□□□□ -0.12
USP6NL-204ENST00000606752 C9orf116Q5BN46 136 aaPredicted RBP14.29□□□□□ -0.12
USP6NL-204ENST00000606752 VAMP3Q15836 100 aa14.28□□□□□ -0.12
USP6NL-204ENST00000606752 MUC7Q8TAX7 377 aa14.28□□□□□ -0.12
USP6NL-204ENST00000606752 C2orf48Q96LS8 159 aa14.28□□□□□ -0.12
USP6NL-204ENST00000606752 PLECQ15149 4684 aaKnown RBP14.28□□□□□ -0.12
USP6NL-204ENST00000606752 CAMK2N2Q96S95 79 aa14.27□□□□□ -0.12
USP6NL-204ENST00000606752 A0A1W2PPM0 123 aa14.27□□□□□ -0.13
USP6NL-204ENST00000606752 F8WDY8 70 aa14.27□□□□□ -0.13
USP6NL-204ENST00000606752 CASC10Q5T4H9 136 aa14.25□□□□□ -0.13
USP6NL-204ENST00000606752 C6orf48Q9UBA6 75 aa14.25□□□□□ -0.13
USP6NL-204ENST00000606752 DNAH1Q9P2D7 4330 aa14.25□□□□□ -0.13
USP6NL-204ENST00000606752 TRBV30A0A0K0K1B3 111 aa14.25□□□□□ -0.13
USP6NL-204ENST00000606752 TSPAN13O95857 204 aa14.25□□□□□ -0.13
USP6NL-204ENST00000606752 TTC32Q5I0X7 151 aa14.25□□□□□ -0.13
USP6NL-204ENST00000606752 TENM2Q9NT68 2774 aa14.24□□□□□ -0.13
USP6NL-204ENST00000606752 SND1-IT1Q9HBX3 110 aa14.24□□□□□ -0.13
USP6NL-204ENST00000606752 STARD9Q9P2P6 4700 aa14.24□□□□□ -0.13
USP6NL-204ENST00000606752 LOC107984156A0A0G2JMH3 177 aa14.23□□□□□ -0.13
USP6NL-204ENST00000606752 USP17L23D6RBM5 183 aa14.23□□□□□ -0.13
USP6NL-204ENST00000606752 FABP2P12104 132 aa14.23□□□□□ -0.13
USP6NL-204ENST00000606752 ARL17AQ8IVW1 177 aa14.23□□□□□ -0.13
USP6NL-204ENST00000606752 NBDYA0A0U1RRE5 68 aa14.22□□□□□ -0.13
USP6NL-204ENST00000606752 LYSTQ99698 3801 aa14.22□□□□□ -0.13
USP6NL-204ENST00000606752 Q6ZRU5 148 aa14.22□□□□□ -0.13
USP6NL-204ENST00000606752 WWC2-AS2Q96NR7 200 aa14.22□□□□□ -0.13
USP6NL-204ENST00000606752 H7C2G1 150 aa14.19□□□□□ -0.14
USP6NL-204ENST00000606752 SYCNQ0VAF6 134 aa14.19□□□□□ -0.14
USP6NL-204ENST00000606752 UBE2V1Q13404 147 aa14.18□□□□□ -0.14
USP6NL-204ENST00000606752 GAGE10A6NGK3 116 aa14.18□□□□□ -0.14
USP6NL-204ENST00000606752 SPCS1Q9Y6A9 102 aa14.17□□□□□ -0.14
USP6NL-204ENST00000606752 PSCAO43653 123 aa14.16□□□□□ -0.14
USP6NL-204ENST00000606752 RPL13AP40429 203 aaKnown RBP14.16□□□□□ -0.14
USP6NL-204ENST00000606752 Q1RN00 199 aa14.16□□□□□ -0.14
USP6NL-204ENST00000606752 IGKV2-28A0A075B6P5 120 aa14.15□□□□□ -0.14
USP6NL-204ENST00000606752 IGKV2D-28P01615 120 aa14.15□□□□□ -0.14
USP6NL-204ENST00000606752 GTF2H5Q6ZYL4 71 aa14.15□□□□□ -0.14
USP6NL-204ENST00000606752 TRAV13-2A0A0B4J235 113 aa14.15□□□□□ -0.14
USP6NL-204ENST00000606752 K7EP34 96 aa14.15□□□□□ -0.14
USP6NL-204ENST00000606752 LECT2O14960 151 aa14.15□□□□□ -0.14
USP6NL-204ENST00000606752 PSMB2P49721 201 aa14.14□□□□□ -0.15
USP6NL-204ENST00000606752 VPS13DQ5THJ4 4388 aa14.14□□□□□ -0.15
USP6NL-204ENST00000606752 NDUFC2O95298 119 aa14.13□□□□□ -0.15
USP6NL-204ENST00000606752 TGP01266 2768 aa14.13□□□□□ -0.15
USP6NL-204ENST00000606752 SLPIP03973 132 aa14.13□□□□□ -0.15
USP6NL-204ENST00000606752 RNF151Q2KHN1 245 aa14.13□□□□□ -0.15
USP6NL-204ENST00000606752 LYRM7Q5U5X0 104 aa14.13□□□□□ -0.15
USP6NL-204ENST00000606752 CARD19Q96LW7 228 aa14.13□□□□□ -0.15
USP6NL-204ENST00000606752 NDUFC2-KCTD14E9PQ53 114 aa14.12□□□□□ -0.15
USP6NL-204ENST00000606752 LINC00337Q8N6G1 96 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms