RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869	MRAP	Q8TCY5	172 aa		13.64	□□□□□ -0.23
STRN4-222	ENST00000601869	FAM236D	A0A1B0GTK5	79 aa		13.63	□□□□□ -0.23
STRN4-222	ENST00000601869	FAM236C	P0DP71	79 aa		13.63	□□□□□ -0.23
STRN4-222	ENST00000601869	HILS1	P60008	231 aa		13.63	□□□□□ -0.23
STRN4-222	ENST00000601869	C18orf65	Q6ZTR6	163 aa		13.63	□□□□□ -0.23
STRN4-222	ENST00000601869	EPM2A	B3EWF7	344 aa		13.63	□□□□□ -0.23
STRN4-222	ENST00000601869	C4orf26	Q17RF5	130 aa		13.63	□□□□□ -0.23
STRN4-222	ENST00000601869	TRAV23DV6	A0A075B6W5	121 aa		13.62	□□□□□ -0.23
STRN4-222	ENST00000601869	C16orf74	Q96GX8	76 aa		13.62	□□□□□ -0.23
STRN4-222	ENST00000601869	TRBV6-8	A0A0A6YYG3	113 aa		13.62	□□□□□ -0.23
STRN4-222	ENST00000601869	IGHV4-31	P0DP07	118 aa		13.62	□□□□□ -0.23
STRN4-222	ENST00000601869		Q8IZM0	81 aa		13.62	□□□□□ -0.23
STRN4-222	ENST00000601869	C6orf226	Q5I0X4	101 aa		13.61	□□□□□ -0.23
STRN4-222	ENST00000601869	ENHO	Q6UWT2	76 aa		13.61	□□□□□ -0.23
STRN4-222	ENST00000601869	SERP1	Q9Y6X1	66 aa		13.61	□□□□□ -0.23
STRN4-222	ENST00000601869	ABCA12	Q86UK0	2595 aa		13.61	□□□□□ -0.23
STRN4-222	ENST00000601869	IGLV4-60	A0A075B6I1	120 aa		13.6	□□□□□ -0.23
STRN4-222	ENST00000601869	TRAV7	A0A075B6U4	112 aa		13.6	□□□□□ -0.23
STRN4-222	ENST00000601869	NAV2	Q8IVL1	2488 aa		13.6	□□□□□ -0.23
STRN4-222	ENST00000601869	XCL1	P47992	114 aa		13.6	□□□□□ -0.23
STRN4-222	ENST00000601869	DEFB113	Q30KQ7	82 aa		13.6	□□□□□ -0.23
STRN4-222	ENST00000601869	HRCT1	Q6UXD1	115 aa		13.6	□□□□□ -0.23
STRN4-222	ENST00000601869	NOP10	Q9NPE3	64 aa	Known RBP	13.6	□□□□□ -0.23
STRN4-222	ENST00000601869	IGKV3OR2-268	A0A0C4DH90	116 aa		13.59	□□□□□ -0.23
STRN4-222	ENST00000601869	FSHB	P01225	129 aa		13.59	□□□□□ -0.23
STRN4-222	ENST00000601869	FAM19A1	Q7Z5A9	133 aa		13.59	□□□□□ -0.23
STRN4-222	ENST00000601869	CR1	P17927	2039 aa		13.58	□□□□□ -0.23
STRN4-222	ENST00000601869	NANOS2	P60321	138 aa	Known RBP	13.58	□□□□□ -0.24
STRN4-222	ENST00000601869	C20orf197	Q8N268	126 aa		13.58	□□□□□ -0.24
STRN4-222	ENST00000601869	TRGV2	A0A075B6R0	118 aa		13.58	□□□□□ -0.24
STRN4-222	ENST00000601869	LINC00959	A0A1B0GUT2	108 aa		13.58	□□□□□ -0.24
STRN4-222	ENST00000601869	COX17	Q14061	63 aa		13.57	□□□□□ -0.24
STRN4-222	ENST00000601869	LOC110117498	A0A087WWA1	95 aa		13.56	□□□□□ -0.24
STRN4-222	ENST00000601869	TRGV4	A0A0C4DH28	118 aa		13.55	□□□□□ -0.24
STRN4-222	ENST00000601869	LOC100131303	A0A0U1RQF7	123 aa		13.55	□□□□□ -0.24
STRN4-222	ENST00000601869	CMC4	P56277	68 aa	Predicted RBP	13.55	□□□□□ -0.24
STRN4-222	ENST00000601869	KLKP1	Q107X0	134 aa		13.55	□□□□□ -0.24
STRN4-222	ENST00000601869	WFDC9	Q8NEX5	89 aa		13.55	□□□□□ -0.24
STRN4-222	ENST00000601869	CREBBP	Q92793	2442 aa		13.54	□□□□□ -0.24
STRN4-222	ENST00000601869	MXRA5	Q9NR99	2828 aa		13.54	□□□□□ -0.24
STRN4-222	ENST00000601869		H3BQ85	93 aa		13.54	□□□□□ -0.24
STRN4-222	ENST00000601869	PLAC8L1	A1L4L8	177 aa		13.54	□□□□□ -0.24
STRN4-222	ENST00000601869		H7BZZ5	65 aa		13.53	□□□□□ -0.24
STRN4-222	ENST00000601869	ZNF561-AS1	K7EIQ3	104 aa		13.53	□□□□□ -0.24
STRN4-222	ENST00000601869		Q6ZQT0	140 aa		13.53	□□□□□ -0.24
STRN4-222	ENST00000601869	LINC00482	Q8N8I6	264 aa		13.52	□□□□□ -0.24
STRN4-222	ENST00000601869	KHDC1L	Q5JSQ8	128 aa		13.52	□□□□□ -0.25
STRN4-222	ENST00000601869	PDE6G	P18545	87 aa		13.51	□□□□□ -0.25
STRN4-222	ENST00000601869	RBM3	P98179	157 aa	Known RBP	13.51	□□□□□ -0.25
STRN4-222	ENST00000601869	APC	P25054	2843 aa		13.51	□□□□□ -0.25
STRN4-222	ENST00000601869	TEX15	Q9BXT5	2789 aa		13.5	□□□□□ -0.25
STRN4-222	ENST00000601869		A0A1B0GUV1	79 aa		13.49	□□□□□ -0.25
STRN4-222	ENST00000601869	KRTAP1-3	Q8IUG1	177 aa		13.49	□□□□□ -0.25
STRN4-222	ENST00000601869	C6orf223	Q8N319	242 aa		13.49	□□□□□ -0.25
STRN4-222	ENST00000601869	CXCL6	P80162	114 aa		13.49	□□□□□ -0.25
STRN4-222	ENST00000601869	LINC00575	Q6W349	94 aa		13.48	□□□□□ -0.25
STRN4-222	ENST00000601869	C11orf68	Q9H3H3	251 aa	Known RBP	13.48	□□□□□ -0.25
STRN4-222	ENST00000601869	NBPF19	A0A087WUL8	3843 aa		13.48	□□□□□ -0.25
STRN4-222	ENST00000601869	NDUFC1	O43677	76 aa		13.47	□□□□□ -0.25
STRN4-222	ENST00000601869	MUC7	Q8TAX7	377 aa		13.47	□□□□□ -0.25
STRN4-222	ENST00000601869	ATP5E	P56381	51 aa	Predicted RBP	13.47	□□□□□ -0.25
STRN4-222	ENST00000601869	LINC01547	P58512	204 aa	Predicted RBP	13.47	□□□□□ -0.25
STRN4-222	ENST00000601869	IGHV4-28	A0A0C4DH34	117 aa		13.46	□□□□□ -0.25
STRN4-222	ENST00000601869	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.46	□□□□□ -0.26
STRN4-222	ENST00000601869	GIG44	P09565	113 aa	Predicted RBP	13.45	□□□□□ -0.26
STRN4-222	ENST00000601869	PRO0628	Q9UI54	55 aa		13.45	□□□□□ -0.26
STRN4-222	ENST00000601869	C6orf99	Q4VX62	202 aa		13.45	□□□□□ -0.26
STRN4-222	ENST00000601869	C9orf66	Q5T8R8	295 aa		13.45	□□□□□ -0.26
STRN4-222	ENST00000601869	SMIM26	A0A096LP01	95 aa		13.44	□□□□□ -0.26
STRN4-222	ENST00000601869		Q6ZVQ6	151 aa		13.43	□□□□□ -0.26
STRN4-222	ENST00000601869	TENM4	Q6N022	2769 aa		13.42	□□□□□ -0.26
STRN4-222	ENST00000601869	KIAA0087	Q14695	138 aa		13.41	□□□□□ -0.26
STRN4-222	ENST00000601869	PRR3	P79522	188 aa	Known RBP	13.41	□□□□□ -0.26
STRN4-222	ENST00000601869	LAMTOR3	Q9UHA4	124 aa		13.41	□□□□□ -0.26
STRN4-222	ENST00000601869	ITPR3	Q14573	2671 aa		13.41	□□□□□ -0.26
STRN4-222	ENST00000601869	WFDC11	Q8NEX6	87 aa		13.4	□□□□□ -0.26
STRN4-222	ENST00000601869	RNASE1	P07998	156 aa	Known RBP	13.4	□□□□□ -0.26
STRN4-222	ENST00000601869	TLN2	Q9Y4G6	2542 aa		13.39	□□□□□ -0.27
STRN4-222	ENST00000601869	CD164L2	Q6UWJ8	174 aa		13.39	□□□□□ -0.27
STRN4-222	ENST00000601869	CSNK1G2-AS1	Q8NCQ2	148 aa		13.39	□□□□□ -0.27
STRN4-222	ENST00000601869	CHD6	Q8TD26	2715 aa		13.38	□□□□□ -0.27
STRN4-222	ENST00000601869	HAMP	P81172	84 aa		13.37	□□□□□ -0.27
STRN4-222	ENST00000601869	MYO9A	B2RTY4	2548 aa		13.37	□□□□□ -0.27
STRN4-222	ENST00000601869	CCL24	O00175	119 aa		13.36	□□□□□ -0.27
STRN4-222	ENST00000601869	TRAV10	A0A0B4J240	114 aa		13.35	□□□□□ -0.27
STRN4-222	ENST00000601869		F8WEM9	126 aa		13.35	□□□□□ -0.27
STRN4-222	ENST00000601869	LINC00612	Q8N6U2	182 aa		13.35	□□□□□ -0.27
STRN4-222	ENST00000601869	ERC2-IT1	O76042	136 aa		13.34	□□□□□ -0.27
STRN4-222	ENST00000601869	CCDC168	Q8NDH2	2452 aa		13.34	□□□□□ -0.27
STRN4-222	ENST00000601869	PLA2G2A	P14555	144 aa		13.33	□□□□□ -0.28
STRN4-222	ENST00000601869	GYPE	P15421	78 aa		13.33	□□□□□ -0.28
STRN4-222	ENST00000601869	RMI2	Q96E14	147 aa		13.33	□□□□□ -0.28
STRN4-222	ENST00000601869	SON	P18583	2426 aa	Known RBP	13.33	□□□□□ -0.28
STRN4-222	ENST00000601869	IGLV6-57	P01721	117 aa		13.32	□□□□□ -0.28
STRN4-222	ENST00000601869	C16orf95	Q9H693	158 aa		13.32	□□□□□ -0.28
STRN4-222	ENST00000601869	FLNA	P21333	2647 aa	Known RBP	13.32	□□□□□ -0.28
STRN4-222	ENST00000601869	TRBV7-4	A0A0J9YYF1	115 aa		13.32	□□□□□ -0.28
STRN4-222	ENST00000601869	RPL35A	P18077	110 aa	Known RBP	13.32	□□□□□ -0.28
STRN4-222	ENST00000601869	LINC00336	Q6ZUF6	198 aa		13.32	□□□□□ -0.28
STRN4-222	ENST00000601869	AKAP9	Q99996	3911 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms