RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 C6orf223Q8N319 242 aa14.92□□□□□ -0.02
IRF3-228ENST00000601291 NTN5Q8WTR8 489 aaPredicted RBP14.91□□□□□ -0.02
IRF3-228ENST00000601291 TMEM238C9JI98 176 aa14.9□□□□□ -0.02
IRF3-228ENST00000601291 CIRBPQ14011 172 aaKnown RBP14.9□□□□□ -0.02
IRF3-228ENST00000601291 MEIG1Q5JSS6 88 aa14.9□□□□□ -0.02
IRF3-228ENST00000601291 LINC00526Q96FQ7 95 aa14.9□□□□□ -0.02
IRF3-228ENST00000601291 C2orf48Q96LS8 159 aa14.9□□□□□ -0.02
IRF3-228ENST00000601291 LINC00587B1AMM8 73 aa14.89□□□□□ -0.03
IRF3-228ENST00000601291 F8WDY8 70 aa14.89□□□□□ -0.03
IRF3-228ENST00000601291 CTAG1AP78358 180 aa14.89□□□□□ -0.03
IRF3-228ENST00000601291 Q6ZRN7 208 aaPredicted RBP14.89□□□□□ -0.03
IRF3-228ENST00000601291 CAMK2N2Q96S95 79 aa14.89□□□□□ -0.03
IRF3-228ENST00000601291 TIMM17BO60830 172 aa14.88□□□□□ -0.03
IRF3-228ENST00000601291 LECT2O14960 151 aa14.87□□□□□ -0.03
IRF3-228ENST00000601291 ALMS1Q8TCU4 4167 aa14.87□□□□□ -0.03
IRF3-228ENST00000601291 C1orf134Q5TEV5 83 aa14.86□□□□□ -0.03
IRF3-228ENST00000601291 SPANXB1Q9NS25 103 aaPredicted RBP14.86□□□□□ -0.03
IRF3-228ENST00000601291 HSD52Q0P140 79 aa14.85□□□□□ -0.03
IRF3-228ENST00000601291 SRSF9Q13242 221 aaKnown RBP eCLIP14.85□□□□□ -0.03
IRF3-228ENST00000601291 UNQ6190/PRO20217Q6UXQ8 127 aa14.85□□□□□ -0.03
IRF3-228ENST00000601291 HIST1H4GQ99525 98 aa14.85□□□□□ -0.03
IRF3-228ENST00000601291 C14orf177Q52M58 125 aa14.85□□□□□ -0.03
IRF3-228ENST00000601291 ERG28Q9UKR5 140 aa14.85□□□□□ -0.03
IRF3-228ENST00000601291 TAL2Q16559 108 aa14.84□□□□□ -0.03
IRF3-228ENST00000601291 LITAFQ99732 161 aa14.84□□□□□ -0.03
IRF3-228ENST00000601291 SMIM13P0DJ93 91 aa14.83□□□□□ -0.04
IRF3-228ENST00000601291 TRBV30A0A0K0K1B3 111 aa14.82□□□□□ -0.04
IRF3-228ENST00000601291 C10orf25Q5T742 122 aa14.82□□□□□ -0.04
IRF3-228ENST00000601291 A0A0U1RRA0 63 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 PFN2P35080 140 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 LINC00158P58513 81 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 SYCNQ0VAF6 134 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 WFDC2Q14508 124 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 Q6ZVH6 145 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 SPANXDQ9BXN6 97 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 SPANXCQ9NY87 97 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 COX17Q14061 63 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 Q6ZRU5 148 aa14.81□□□□□ -0.04
IRF3-228ENST00000601291 LCE6AA0A183 80 aa14.8□□□□□ -0.04
IRF3-228ENST00000601291 M0R143 59 aa14.8□□□□□ -0.04
IRF3-228ENST00000601291 ADAMTSL4-AS1Q5T5F5 129 aa14.8□□□□□ -0.04
IRF3-228ENST00000601291 C6orf48Q9UBA6 75 aa14.8□□□□□ -0.04
IRF3-228ENST00000601291 LRCOL1A6NCL2 159 aa14.79□□□□□ -0.04
IRF3-228ENST00000601291 CARD19Q96LW7 228 aa14.79□□□□□ -0.04
IRF3-228ENST00000601291 GCSHP23434 173 aa14.77□□□□□ -0.04
IRF3-228ENST00000601291 HINT1P49773 126 aaPredicted RBP14.77□□□□□ -0.04
IRF3-228ENST00000601291 C9orf116Q5BN46 136 aaPredicted RBP14.77□□□□□ -0.04
IRF3-228ENST00000601291 CEND1Q8N111 149 aa14.77□□□□□ -0.04
IRF3-228ENST00000601291 DAND5Q8N907 189 aa14.77□□□□□ -0.04
IRF3-228ENST00000601291 MIR7-3HGQ8N6C7 128 aa14.77□□□□□ -0.05
IRF3-228ENST00000601291 COPS9Q8WXC6 57 aa14.77□□□□□ -0.05
IRF3-228ENST00000601291 IFITM1P13164 125 aa14.75□□□□□ -0.05
IRF3-228ENST00000601291 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.74□□□□□ -0.05
IRF3-228ENST00000601291 RNF151Q2KHN1 245 aa14.74□□□□□ -0.05
IRF3-228ENST00000601291 BVES-AS1Q5T3Y7 98 aa14.74□□□□□ -0.05
IRF3-228ENST00000601291 SLPIP03973 132 aa14.73□□□□□ -0.05
IRF3-228ENST00000601291 NPC2P61916 151 aa14.73□□□□□ -0.05
IRF3-228ENST00000601291 MUSTN1Q8IVN3 82 aa14.73□□□□□ -0.05
IRF3-228ENST00000601291 DNAH6Q9C0G6 4158 aa14.73□□□□□ -0.05
IRF3-228ENST00000601291 A0A087WTM6 91 aa14.73□□□□□ -0.05
IRF3-228ENST00000601291 PTTG1IPP53801 180 aa14.73□□□□□ -0.05
IRF3-228ENST00000601291 CNBPP62633 177 aaKnown RBP14.73□□□□□ -0.05
IRF3-228ENST00000601291 BATFQ16520 125 aa14.73□□□□□ -0.05
IRF3-228ENST00000601291 RPL24P83731 157 aaKnown RBP14.72□□□□□ -0.05
IRF3-228ENST00000601291 Q8N814 137 aa14.72□□□□□ -0.05
IRF3-228ENST00000601291 LINC00308Q8TCZ7 52 aa14.72□□□□□ -0.05
IRF3-228ENST00000601291 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.71□□□□□ -0.05
IRF3-228ENST00000601291 TMEM238LA0A1B0GVL6 79 aa14.7□□□□□ -0.06
IRF3-228ENST00000601291 A6NJY4 79 aa14.7□□□□□ -0.06
IRF3-228ENST00000601291 KMT2AQ03164 3969 aa14.7□□□□□ -0.06
IRF3-228ENST00000601291 NDUFC2-KCTD14E9PQ53 114 aa14.69□□□□□ -0.06
IRF3-228ENST00000601291 FXYD2P54710 66 aa14.69□□□□□ -0.06
IRF3-228ENST00000601291 SNHG12Q9BXW3 62 aa14.68□□□□□ -0.06
IRF3-228ENST00000601291 PPDPFQ9H3Y8 114 aa14.68□□□□□ -0.06
IRF3-228ENST00000601291 DNAH10Q8IVF4 4471 aa14.68□□□□□ -0.06
IRF3-228ENST00000601291 EREGO14944 169 aa14.68□□□□□ -0.06
IRF3-228ENST00000601291 SOSTDC1Q6X4U4 206 aa14.66□□□□□ -0.06
IRF3-228ENST00000601291 SND1-IT1Q9HBX3 110 aa14.66□□□□□ -0.06
IRF3-228ENST00000601291 A6NDN8 102 aa14.65□□□□□ -0.06
IRF3-228ENST00000601291 RTL8CO15255 209 aa14.65□□□□□ -0.06
IRF3-228ENST00000601291 TLX1NBP0CAT3 122 aa14.65□□□□□ -0.06
IRF3-228ENST00000601291 A4D1N5 150 aa14.64□□□□□ -0.07
IRF3-228ENST00000601291 RPL18AQ02543 176 aaKnown RBP14.64□□□□□ -0.07
IRF3-228ENST00000601291 EIF4EBP3O60516 100 aaPredicted RBP14.64□□□□□ -0.07
IRF3-228ENST00000601291 LOC107984156A0A0G2JMH3 177 aa14.63□□□□□ -0.07
IRF3-228ENST00000601291 LOC107984640A0A0U1RRK4 108 aa14.63□□□□□ -0.07
IRF3-228ENST00000601291 TNP2Q05952 138 aa14.63□□□□□ -0.07
IRF3-228ENST00000601291 ARL17AQ8IVW1 177 aa14.63□□□□□ -0.07
IRF3-228ENST00000601291 Q6ZRP5 223 aa14.62□□□□□ -0.07
IRF3-228ENST00000601291 NHP2Q9NX24 153 aaKnown RBP14.62□□□□□ -0.07
IRF3-228ENST00000601291 PKIGQ9Y2B9 76 aa14.62□□□□□ -0.07
IRF3-228ENST00000601291 GAGE2EQ4V326 116 aa14.61□□□□□ -0.07
IRF3-228ENST00000601291 GAGE2DQ9UEU5 116 aa14.61□□□□□ -0.07
IRF3-228ENST00000601291 C9orf163Q8N9P6 203 aa14.6□□□□□ -0.07
IRF3-228ENST00000601291 XAGE1AQ9HD64 81 aa14.6□□□□□ -0.07
IRF3-228ENST00000601291 DNAH2Q9P225 4427 aa14.59□□□□□ -0.07
IRF3-228ENST00000601291 COL5A1-AS1Q5SY13 56 aa14.57□□□□□ -0.08
IRF3-228ENST00000601291 HYDINQ4G0P3 5121 aa14.57□□□□□ -0.08
IRF3-228ENST00000601291 A0A1B0GWB2 263 aa14.56□□□□□ -0.08
IRF3-228ENST00000601291 GAGE2BQ13066 116 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms