RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 ZC2HC1BQ5TFG8 222 aa8.64□□□□□ -1.03
XRCC1-209ENST00000599693 KRTAP13-1Q8IUC0 172 aa8.64□□□□□ -1.03
XRCC1-209ENST00000599693 ORMDL3Q8N138 153 aa8.64□□□□□ -1.03
XRCC1-209ENST00000599693 PRELID3AQ96N28 172 aa8.63□□□□□ -1.03
XRCC1-209ENST00000599693 AMELXQ99217 191 aa8.63□□□□□ -1.03
XRCC1-209ENST00000599693 UBE2AP49459 152 aa8.62□□□□□ -1.03
XRCC1-209ENST00000599693 CTAG1AP78358 180 aa8.62□□□□□ -1.03
XRCC1-209ENST00000599693 TMEM136Q6ZRR5 245 aa8.62□□□□□ -1.03
XRCC1-209ENST00000599693 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
XRCC1-209ENST00000599693 NAT8Q9UHE5 227 aa8.62□□□□□ -1.03
XRCC1-209ENST00000599693 CYSLTR1Q9Y271 337 aa8.62□□□□□ -1.03
XRCC1-209ENST00000599693 GAGE10A6NGK3 116 aa8.61□□□□□ -1.03
XRCC1-209ENST00000599693 VCX2Q9H322 139 aa8.61□□□□□ -1.03
XRCC1-209ENST00000599693 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
XRCC1-209ENST00000599693 PRSS47A8MTI9 375 aa8.6□□□□□ -1.03
XRCC1-209ENST00000599693 CXCL5P42830 114 aa8.6□□□□□ -1.03
XRCC1-209ENST00000599693 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
XRCC1-209ENST00000599693 IGLV5-37A0A075B6J1 123 aa8.59□□□□□ -1.03
XRCC1-209ENST00000599693 LOC389332A0A1B0GUA5 103 aa8.59□□□□□ -1.03
XRCC1-209ENST00000599693 NPSP0C0P6 89 aa8.59□□□□□ -1.03
XRCC1-209ENST00000599693 LCE2DQ5TA82 110 aaPredicted RBP8.59□□□□□ -1.03
XRCC1-209ENST00000599693 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
XRCC1-209ENST00000599693 CDKN2A-AS1Q9UH64 79 aa8.59□□□□□ -1.03
XRCC1-209ENST00000599693 HERVK_113P63121 156 aa8.58□□□□□ -1.04
XRCC1-209ENST00000599693 SEC11AP67812 179 aa8.58□□□□□ -1.04
XRCC1-209ENST00000599693 PNRC1Q12796 327 aaPredicted RBP8.58□□□□□ -1.04
XRCC1-209ENST00000599693 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
XRCC1-209ENST00000599693 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
XRCC1-209ENST00000599693 ATP5L2Q7Z4Y8 100 aa8.57□□□□□ -1.04
XRCC1-209ENST00000599693 Q8N8P6 123 aa8.57□□□□□ -1.04
XRCC1-209ENST00000599693 NKAPP1Q8N9T2 125 aa8.57□□□□□ -1.04
XRCC1-209ENST00000599693 LAMTOR2Q9Y2Q5 125 aa8.57□□□□□ -1.04
XRCC1-209ENST00000599693 C9JQL5 133 aa8.56□□□□□ -1.04
XRCC1-209ENST00000599693 GEMIN7Q9H840 131 aaKnown RBP8.56□□□□□ -1.04
XRCC1-209ENST00000599693 LINC01547P58512 204 aaPredicted RBP8.55□□□□□ -1.04
XRCC1-209ENST00000599693 ORMDL2Q53FV1 153 aa8.55□□□□□ -1.04
XRCC1-209ENST00000599693 IGKV2-28A0A075B6P5 120 aa8.54□□□□□ -1.04
XRCC1-209ENST00000599693 SMIM1B2RUZ4 78 aa8.54□□□□□ -1.04
XRCC1-209ENST00000599693 IGKV2D-28P01615 120 aa8.54□□□□□ -1.04
XRCC1-209ENST00000599693 PAPPA-AS1Q5QFB9 102 aa8.54□□□□□ -1.04
XRCC1-209ENST00000599693 PRLHP81277 87 aa8.53□□□□□ -1.04
XRCC1-209ENST00000599693 AKAP14Q86UN6 197 aa8.53□□□□□ -1.04
XRCC1-209ENST00000599693 COX7B2Q8TF08 81 aa8.53□□□□□ -1.04
XRCC1-209ENST00000599693 CRCT1Q9UGL9 99 aa8.53□□□□□ -1.04
XRCC1-209ENST00000599693 K7EMI3 77 aa8.52□□□□□ -1.05
XRCC1-209ENST00000599693 SCO1O75880 301 aa8.52□□□□□ -1.05
XRCC1-209ENST00000599693 FP248Q71RG6 208 aaPredicted RBP8.52□□□□□ -1.05
XRCC1-209ENST00000599693 C3orf22Q8N5N4 141 aa8.52□□□□□ -1.05
XRCC1-209ENST00000599693 ASB16-AS1Q495Z4 193 aa8.51□□□□□ -1.05
XRCC1-209ENST00000599693 PDZD11Q5EBL8 140 aa8.51□□□□□ -1.05
XRCC1-209ENST00000599693 TIMM17AQ99595 171 aa8.51□□□□□ -1.05
XRCC1-209ENST00000599693 RAB5BP61020 215 aa8.5□□□□□ -1.05
XRCC1-209ENST00000599693 SRSF3P84103 164 aaKnown RBP8.5□□□□□ -1.05
XRCC1-209ENST00000599693 SPAG11AQ6PDA7 123 aa8.5□□□□□ -1.05
XRCC1-209ENST00000599693 FAM19A1Q7Z5A9 133 aa8.5□□□□□ -1.05
XRCC1-209ENST00000599693 LINC00337Q8N6G1 96 aa8.5□□□□□ -1.05
XRCC1-209ENST00000599693 PEA15Q15121 130 aa8.49□□□□□ -1.05
XRCC1-209ENST00000599693 KRTAP13-3Q3SY46 172 aa8.49□□□□□ -1.05
XRCC1-209ENST00000599693 PLEKHB2Q96CS7 222 aa8.49□□□□□ -1.05
XRCC1-209ENST00000599693 TMEM126AQ9H061 195 aa8.49□□□□□ -1.05
XRCC1-209ENST00000599693 NXT2Q9NPJ8 142 aaKnown RBP8.49□□□□□ -1.05
XRCC1-209ENST00000599693 IGLV5-45A0A087WSX0 123 aa8.48□□□□□ -1.05
XRCC1-209ENST00000599693 TMEM238C9JI98 176 aa8.48□□□□□ -1.05
XRCC1-209ENST00000599693 TINCRA0A1B0GVN0 87 aa8.47□□□□□ -1.05
XRCC1-209ENST00000599693 G0S2P27469 103 aa8.47□□□□□ -1.05
XRCC1-209ENST00000599693 TOMM6Q96B49 74 aa8.47□□□□□ -1.05
XRCC1-209ENST00000599693 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
XRCC1-209ENST00000599693 FSIP2Q5CZC0 6907 aa8.47□□□□□ -1.05
XRCC1-209ENST00000599693 M0R378 163 aa8.46□□□□□ -1.06
XRCC1-209ENST00000599693 VPREB1P12018 145 aa8.46□□□□□ -1.06
XRCC1-209ENST00000599693 CBLN2Q8IUK8 224 aa8.46□□□□□ -1.06
XRCC1-209ENST00000599693 GNB1LQ9BYB4 327 aa8.46□□□□□ -1.06
XRCC1-209ENST00000599693 SPINK8P0C7L1 97 aa8.45□□□□□ -1.06
XRCC1-209ENST00000599693 ERASQ7Z444 233 aa8.45□□□□□ -1.06
XRCC1-209ENST00000599693 ATP5LO75964 103 aa8.44□□□□□ -1.06
XRCC1-209ENST00000599693 SEC61BP60468 96 aaKnown RBP8.44□□□□□ -1.06
XRCC1-209ENST00000599693 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
XRCC1-209ENST00000599693 SCGB3A1Q96QR1 104 aa8.43□□□□□ -1.06
XRCC1-209ENST00000599693 HIGD2AQ9BW72 106 aa8.43□□□□□ -1.06
XRCC1-209ENST00000599693 PFN2P35080 140 aa8.42□□□□□ -1.06
XRCC1-209ENST00000599693 SPRR4Q96PI1 79 aa8.42□□□□□ -1.06
XRCC1-209ENST00000599693 SND1-IT1Q9HBX3 110 aa8.42□□□□□ -1.06
XRCC1-209ENST00000599693 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
XRCC1-209ENST00000599693 RPL24P83731 157 aaKnown RBP8.41□□□□□ -1.06
XRCC1-209ENST00000599693 hCG_2014768A0A024R1R8 64 aa8.4□□□□□ -1.06
XRCC1-209ENST00000599693 Q8NBF4 154 aa8.4□□□□□ -1.06
XRCC1-209ENST00000599693 MRPL18Q9H0U6 180 aaKnown RBP8.4□□□□□ -1.06
XRCC1-209ENST00000599693 CST9LQ9H4G1 147 aa8.4□□□□□ -1.06
XRCC1-209ENST00000599693 H3BRM9 83 aa8.39□□□□□ -1.07
XRCC1-209ENST00000599693 DAND5Q8N907 189 aa8.39□□□□□ -1.07
XRCC1-209ENST00000599693 Q8NDZ9 215 aa8.39□□□□□ -1.07
XRCC1-209ENST00000599693 ZNF706Q9Y5V0 76 aaPredicted RBP8.39□□□□□ -1.07
XRCC1-209ENST00000599693 RAB14P61106 215 aa8.38□□□□□ -1.07
XRCC1-209ENST00000599693 ANAPC16Q96DE5 110 aa8.38□□□□□ -1.07
XRCC1-209ENST00000599693 ERG28Q9UKR5 140 aa8.38□□□□□ -1.07
XRCC1-209ENST00000599693 LINC01549A6NIU2 74 aa8.37□□□□□ -1.07
XRCC1-209ENST00000599693 SPINK1P00995 79 aa8.37□□□□□ -1.07
XRCC1-209ENST00000599693 PMVKQ15126 192 aa8.37□□□□□ -1.07
XRCC1-209ENST00000599693 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
XRCC1-209ENST00000599693 MT-ND4LP03901 98 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms