RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-222	ENST00000599144	LINC00173	Q6ZV60	143 aa		11.3	□□□□□ -0.6
IRF3-222	ENST00000599144	PRELID3A	Q96N28	172 aa		11.3	□□□□□ -0.6
IRF3-222	ENST00000599144	PYGO1	Q9Y3Y4	419 aa		11.3	□□□□□ -0.6
IRF3-222	ENST00000599144	RETNLB	Q9BQ08	111 aa		11.29	□□□□□ -0.6
IRF3-222	ENST00000599144	PRSS2	P07478	247 aa		11.28	□□□□□ -0.6
IRF3-222	ENST00000599144	CKS1B	P61024	79 aa		11.28	□□□□□ -0.6
IRF3-222	ENST00000599144	ORMDL3	Q8N138	153 aa		11.28	□□□□□ -0.6
IRF3-222	ENST00000599144	SMCO4	Q9NRQ5	59 aa		11.28	□□□□□ -0.6
IRF3-222	ENST00000599144	NUPR1	O60356	82 aa		11.27	□□□□□ -0.61
IRF3-222	ENST00000599144	PPBP	P02775	128 aa		11.27	□□□□□ -0.61
IRF3-222	ENST00000599144	COX19	Q49B96	90 aa		11.27	□□□□□ -0.61
IRF3-222	ENST00000599144	TYMSOS	Q8TAI1	123 aa		11.27	□□□□□ -0.61
IRF3-222	ENST00000599144	C6orf226	Q5I0X4	101 aa		11.26	□□□□□ -0.61
IRF3-222	ENST00000599144		Q6ZN92	141 aa		11.26	□□□□□ -0.61
IRF3-222	ENST00000599144	RPL37AP8	A6NKH3	93 aa		11.25	□□□□□ -0.61
IRF3-222	ENST00000599144	LBH	Q53QV2	105 aa	Predicted RBP	11.25	□□□□□ -0.61
IRF3-222	ENST00000599144	C2orf66	Q6UXQ4	117 aa		11.25	□□□□□ -0.61
IRF3-222	ENST00000599144	LINC01561	Q8N1V8	128 aa		11.25	□□□□□ -0.61
IRF3-222	ENST00000599144	C2orf88	Q9BSF0	95 aa		11.25	□□□□□ -0.61
IRF3-222	ENST00000599144	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.25	□□□□□ -0.61
IRF3-222	ENST00000599144	GAGE10	A6NGK3	116 aa		11.24	□□□□□ -0.61
IRF3-222	ENST00000599144	S100A1	P23297	94 aa		11.24	□□□□□ -0.61
IRF3-222	ENST00000599144	MRPL55	Q7Z7F7	128 aa	Known RBP	11.24	□□□□□ -0.61
IRF3-222	ENST00000599144	AMELX	Q99217	191 aa		11.24	□□□□□ -0.61
IRF3-222	ENST00000599144	GNB1L	Q9BYB4	327 aa		11.24	□□□□□ -0.61
IRF3-222	ENST00000599144	MUC17	Q685J3	4493 aa		11.24	□□□□□ -0.61
IRF3-222	ENST00000599144	BCE1	O60756	84 aa		11.23	□□□□□ -0.61
IRF3-222	ENST00000599144	CRYGA	P11844	174 aa		11.23	□□□□□ -0.61
IRF3-222	ENST00000599144	RPL28	P46779	137 aa	Known RBP	11.23	□□□□□ -0.61
IRF3-222	ENST00000599144	KRTAP13-2	Q52LG2	175 aa		11.23	□□□□□ -0.61
IRF3-222	ENST00000599144	VCX2	Q9H322	139 aa		11.23	□□□□□ -0.61
IRF3-222	ENST00000599144	CBLN2	Q8IUK8	224 aa		11.22	□□□□□ -0.61
IRF3-222	ENST00000599144		Q8IZM0	81 aa		11.22	□□□□□ -0.61
IRF3-222	ENST00000599144	CDKN2A-AS1	Q9UH64	79 aa		11.22	□□□□□ -0.61
IRF3-222	ENST00000599144	CYSLTR1	Q9Y271	337 aa		11.22	□□□□□ -0.61
IRF3-222	ENST00000599144	LINC00167	Q96N53	147 aa		11.21	□□□□□ -0.61
IRF3-222	ENST00000599144	MAP1LC3A	Q9H492	121 aa		11.21	□□□□□ -0.61
IRF3-222	ENST00000599144	ATP6V1G1	O75348	118 aa		11.2	□□□□□ -0.62
IRF3-222	ENST00000599144	KRTAP9-6	A0A140TA67	174 aa		11.19	□□□□□ -0.62
IRF3-222	ENST00000599144	IGIP	A6NJ69	53 aa		11.19	□□□□□ -0.62
IRF3-222	ENST00000599144	PRSS47	A8MTI9	375 aa		11.19	□□□□□ -0.62
IRF3-222	ENST00000599144		Q8N8P6	123 aa		11.19	□□□□□ -0.62
IRF3-222	ENST00000599144		F8VRH5	84 aa		11.18	□□□□□ -0.62
IRF3-222	ENST00000599144	YPEL4	Q96NS1	127 aa		11.18	□□□□□ -0.62
IRF3-222	ENST00000599144	TP73-AS1	Q9UF72	201 aa		11.18	□□□□□ -0.62
IRF3-222	ENST00000599144	LAMTOR2	Q9Y2Q5	125 aa		11.18	□□□□□ -0.62
IRF3-222	ENST00000599144	SCO1	O75880	301 aa		11.17	□□□□□ -0.62
IRF3-222	ENST00000599144	FABP9	Q0Z7S8	132 aa		11.16	□□□□□ -0.62
IRF3-222	ENST00000599144	FAM19A3	Q7Z5A8	133 aa		11.16	□□□□□ -0.62
IRF3-222	ENST00000599144	MRPL18	Q9H0U6	180 aa	Known RBP	11.16	□□□□□ -0.62
IRF3-222	ENST00000599144	TRAPPC1	Q9Y5R8	145 aa		11.16	□□□□□ -0.62
IRF3-222	ENST00000599144	GEMIN7	Q9H840	131 aa	Known RBP	11.15	□□□□□ -0.62
IRF3-222	ENST00000599144	RAB5B	P61020	215 aa		11.14	□□□□□ -0.63
IRF3-222	ENST00000599144	HERVK_113	P63121	156 aa		11.14	□□□□□ -0.63
IRF3-222	ENST00000599144	KRTAP13-1	Q8IUC0	172 aa		11.14	□□□□□ -0.63
IRF3-222	ENST00000599144	UBE2A	P49459	152 aa		11.13	□□□□□ -0.63
IRF3-222	ENST00000599144	KIAA1644	Q3SXP7	199 aa		11.13	□□□□□ -0.63
IRF3-222	ENST00000599144	ORMDL2	Q53FV1	153 aa		11.13	□□□□□ -0.63
IRF3-222	ENST00000599144	LINC00304	Q8N9R0	145 aa		11.13	□□□□□ -0.63
IRF3-222	ENST00000599144	CDIP1	Q9H305	208 aa		11.13	□□□□□ -0.63
IRF3-222	ENST00000599144	SMIM1	B2RUZ4	78 aa		11.12	□□□□□ -0.63
IRF3-222	ENST00000599144	IGKV2-28	A0A075B6P5	120 aa		11.11	□□□□□ -0.63
IRF3-222	ENST00000599144	COLCA2	A8K830	154 aa		11.11	□□□□□ -0.63
IRF3-222	ENST00000599144	IGKV2D-28	P01615	120 aa		11.11	□□□□□ -0.63
IRF3-222	ENST00000599144	IGLV7-46	A0A075B6I9	117 aa		11.1	□□□□□ -0.63
IRF3-222	ENST00000599144	PRLH	P81277	87 aa		11.1	□□□□□ -0.63
IRF3-222	ENST00000599144	COX7B2	Q8TF08	81 aa		11.1	□□□□□ -0.63
IRF3-222	ENST00000599144	NPS	P0C0P6	89 aa		11.08	□□□□□ -0.64
IRF3-222	ENST00000599144	SPINK8	P0C7L1	97 aa		11.08	□□□□□ -0.64
IRF3-222	ENST00000599144	CXCL5	P42830	114 aa		11.08	□□□□□ -0.64
IRF3-222	ENST00000599144	SEC11A	P67812	179 aa		11.08	□□□□□ -0.64
IRF3-222	ENST00000599144	NKAPP1	Q8N9T2	125 aa		11.08	□□□□□ -0.64
IRF3-222	ENST00000599144	NXT2	Q9NPJ8	142 aa	Known RBP	11.08	□□□□□ -0.64
IRF3-222	ENST00000599144	IGLV5-37	A0A075B6J1	123 aa		11.06	□□□□□ -0.64
IRF3-222	ENST00000599144		K7EMI3	77 aa		11.06	□□□□□ -0.64
IRF3-222	ENST00000599144	TPRXL	Q17RH7	258 aa		11.06	□□□□□ -0.64
IRF3-222	ENST00000599144	TOMM6	Q96B49	74 aa		11.06	□□□□□ -0.64
IRF3-222	ENST00000599144	TIMM17A	Q99595	171 aa		11.06	□□□□□ -0.64
IRF3-222	ENST00000599144	IGKV2D-26	A0A0A0MRZ7	120 aa		11.05	□□□□□ -0.64
IRF3-222	ENST00000599144	TMEM238	C9JI98	176 aa		11.05	□□□□□ -0.64
IRF3-222	ENST00000599144	TRGC2	P03986	189 aa		11.05	□□□□□ -0.64
IRF3-222	ENST00000599144	FAM229B	Q4G0N7	80 aa		11.05	□□□□□ -0.64
IRF3-222	ENST00000599144	PDZD11	Q5EBL8	140 aa		11.05	□□□□□ -0.64
IRF3-222	ENST00000599144	SCGB3A1	Q96QR1	104 aa		11.05	□□□□□ -0.64
IRF3-222	ENST00000599144	PAPPA-AS1	Q5QFB9	102 aa		11.04	□□□□□ -0.64
IRF3-222	ENST00000599144	C3orf22	Q8N5N4	141 aa		11.04	□□□□□ -0.64
IRF3-222	ENST00000599144	FAM19A1	Q7Z5A9	133 aa		11.03	□□□□□ -0.64
IRF3-222	ENST00000599144	TINCR	A0A1B0GVN0	87 aa		11.02	□□□□□ -0.65
IRF3-222	ENST00000599144	G0S2	P27469	103 aa		11.02	□□□□□ -0.65
IRF3-222	ENST00000599144	PFN2	P35080	140 aa		11.02	□□□□□ -0.65
IRF3-222	ENST00000599144	FA2H	Q7L5A8	372 aa		11.02	□□□□□ -0.65
IRF3-222	ENST00000599144	IGLV5-45	A0A087WSX0	123 aa		11.01	□□□□□ -0.65
IRF3-222	ENST00000599144	ERAS	Q7Z444	233 aa		11.01	□□□□□ -0.65
IRF3-222	ENST00000599144	C18orf32	Q8TCD1	76 aa		11.01	□□□□□ -0.65
IRF3-222	ENST00000599144	PPDPF	Q9H3Y8	114 aa		11.01	□□□□□ -0.65
IRF3-222	ENST00000599144	TMEM126A	Q9H061	195 aa		11	□□□□□ -0.65
IRF3-222	ENST00000599144		Q8NDZ9	215 aa		10.99	□□□□□ -0.65
IRF3-222	ENST00000599144	CST9L	Q9H4G1	147 aa		10.99	□□□□□ -0.65
IRF3-222	ENST00000599144	LINC01546	A6NGU7	62 aa		10.98	□□□□□ -0.65
IRF3-222	ENST00000599144	VPREB1	P12018	145 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 345.3 ms