RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
SCAF1-203ENST00000598359 CNBPP62633 177 aaKnown RBP8.82□□□□□ -1
SCAF1-203ENST00000598359 HIGD2BQ4VC39 106 aa8.82□□□□□ -1
SCAF1-203ENST00000598359 CHCHD10Q8WYQ3 142 aaPredicted RBP8.82□□□□□ -1
SCAF1-203ENST00000598359 CST9LQ9H4G1 147 aa8.82□□□□□ -1
SCAF1-203ENST00000598359 TP73-AS1Q9UF72 201 aa8.82□□□□□ -1
SCAF1-203ENST00000598359 LRP1Q07954 4544 aaKnown RBP8.81□□□□□ -1
SCAF1-203ENST00000598359 IGKV2D-26A0A0A0MRZ7 120 aa8.81□□□□□ -1
SCAF1-203ENST00000598359 SPANXA1Q9NS26 97 aa8.81□□□□□ -1
SCAF1-203ENST00000598359 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
SCAF1-203ENST00000598359 CHTF8P0CG12 524 aa8.8□□□□□ -1
SCAF1-203ENST00000598359 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
SCAF1-203ENST00000598359 TIMM21Q9BVV7 248 aa8.8□□□□□ -1
SCAF1-203ENST00000598359 HIGD1BQ9P298 99 aa8.8□□□□□ -1
SCAF1-203ENST00000598359 E9PLD3 99 aa8.79□□□□□ -1
SCAF1-203ENST00000598359 H7C423 109 aa8.79□□□□□ -1
SCAF1-203ENST00000598359 NMUP48645 174 aa8.79□□□□□ -1
SCAF1-203ENST00000598359 RPL37AP61513 92 aaKnown RBP8.79□□□□□ -1
SCAF1-203ENST00000598359 COL5A1-AS1Q5SY13 56 aa8.79□□□□□ -1
SCAF1-203ENST00000598359 PCP2Q8IVA1 136 aa8.79□□□□□ -1
SCAF1-203ENST00000598359 FAM104AQ969W3 186 aa8.79□□□□□ -1
SCAF1-203ENST00000598359 AMELXQ99217 191 aa8.79□□□□□ -1
SCAF1-203ENST00000598359 IGHV3-64A0A075B6Q5 118 aa8.78□□□□□ -1
SCAF1-203ENST00000598359 A0A1B0GV90 55 aa8.78□□□□□ -1
SCAF1-203ENST00000598359 C11orf86A6NJI1 115 aa8.78□□□□□ -1
SCAF1-203ENST00000598359 XCL1P47992 114 aa8.78□□□□□ -1
SCAF1-203ENST00000598359 FOXI1Q12951 378 aa8.78□□□□□ -1
SCAF1-203ENST00000598359 TMEM101Q96IK0 257 aa8.78□□□□□ -1
SCAF1-203ENST00000598359 UBE2D4Q9Y2X8 147 aa8.78□□□□□ -1
SCAF1-203ENST00000598359 FAT3Q8TDW7 4589 aa8.77□□□□□ -1.01
SCAF1-203ENST00000598359 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1.01
SCAF1-203ENST00000598359 ZNF25P17030 456 aaPredicted RBP8.77□□□□□ -1.01
SCAF1-203ENST00000598359 HINT1P49773 126 aaPredicted RBP8.77□□□□□ -1.01
SCAF1-203ENST00000598359 MRPS36P82909 103 aaKnown RBP8.77□□□□□ -1.01
SCAF1-203ENST00000598359 HSD52Q0P140 79 aa8.77□□□□□ -1.01
SCAF1-203ENST00000598359 BVES-AS1Q5T3Y7 98 aa8.77□□□□□ -1.01
SCAF1-203ENST00000598359 OR5A1Q8NGJ0 315 aa8.77□□□□□ -1.01
SCAF1-203ENST00000598359 PKHD1L1Q86WI1 4243 aa8.77□□□□□ -1.01
SCAF1-203ENST00000598359 LINC00959A0A1B0GUT2 108 aa8.76□□□□□ -1.01
SCAF1-203ENST00000598359 KRTAP29-1A8MX34 341 aaPredicted RBP8.76□□□□□ -1.01
SCAF1-203ENST00000598359 CCL25O15444 150 aa8.76□□□□□ -1.01
SCAF1-203ENST00000598359 CFAP161Q6P656 301 aa8.76□□□□□ -1.01
SCAF1-203ENST00000598359 LINC00526Q96FQ7 95 aa8.76□□□□□ -1.01
SCAF1-203ENST00000598359 DPH3Q96FX2 82 aa8.76□□□□□ -1.01
SCAF1-203ENST00000598359 HERVK_113P61574 105 aa8.75□□□□□ -1.01
SCAF1-203ENST00000598359 COX6A2Q02221 97 aa8.75□□□□□ -1.01
SCAF1-203ENST00000598359 CIRBPQ14011 172 aaKnown RBP8.75□□□□□ -1.01
SCAF1-203ENST00000598359 BATFQ16520 125 aa8.75□□□□□ -1.01
SCAF1-203ENST00000598359 RNASE13Q5GAN3 156 aaKnown RBP8.75□□□□□ -1.01
SCAF1-203ENST00000598359 OPRPNQ99935 248 aaPredicted RBP8.75□□□□□ -1.01
SCAF1-203ENST00000598359 VCX2Q9H322 139 aa8.75□□□□□ -1.01
SCAF1-203ENST00000598359 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
SCAF1-203ENST00000598359 CSDC2Q9Y534 153 aaKnown RBP8.75□□□□□ -1.01
SCAF1-203ENST00000598359 A0A087WYN8 130 aa8.74□□□□□ -1.01
SCAF1-203ENST00000598359 SPACA4Q8TDM5 124 aa8.74□□□□□ -1.01
SCAF1-203ENST00000598359 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
SCAF1-203ENST00000598359 IGKV2-24A0A0C4DH68 120 aa8.73□□□□□ -1.01
SCAF1-203ENST00000598359 SEC11AP67812 179 aa8.73□□□□□ -1.01
SCAF1-203ENST00000598359 SMAGPQ0VAQ4 97 aa8.73□□□□□ -1.01
SCAF1-203ENST00000598359 TAL2Q16559 108 aa8.73□□□□□ -1.01
SCAF1-203ENST00000598359 FAM19A3Q7Z5A8 133 aa8.73□□□□□ -1.01
SCAF1-203ENST00000598359 TTTY13Q9BZ97 58 aa8.73□□□□□ -1.01
SCAF1-203ENST00000598359 MYMXA0A1B0GTQ4 84 aa8.72□□□□□ -1.01
SCAF1-203ENST00000598359 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
SCAF1-203ENST00000598359 ZNF22P17026 224 aaPredicted RBP8.72□□□□□ -1.01
SCAF1-203ENST00000598359 PLA2G2DQ9UNK4 145 aa8.72□□□□□ -1.01
SCAF1-203ENST00000598359 TINCRA0A1B0GVN0 87 aa8.71□□□□□ -1.02
SCAF1-203ENST00000598359 SS18Q15532 418 aa8.71□□□□□ -1.02
SCAF1-203ENST00000598359 Q6ZUT4 128 aa8.71□□□□□ -1.02
SCAF1-203ENST00000598359 ORAOV1Q8WV07 137 aa8.71□□□□□ -1.02
SCAF1-203ENST00000598359 IGHV1-58A0A0C4DH39 117 aa8.7□□□□□ -1.02
SCAF1-203ENST00000598359 A0A0J9YXV3 536 aa8.7□□□□□ -1.02
SCAF1-203ENST00000598359 TMEM170BQ5T4T1 132 aa8.7□□□□□ -1.02
SCAF1-203ENST00000598359 IGLV5-45A0A087WSX0 123 aa8.69□□□□□ -1.02
SCAF1-203ENST00000598359 A0A096LNI7 61 aa8.69□□□□□ -1.02
SCAF1-203ENST00000598359 TRAV13-1A0A0B4J241 112 aa8.69□□□□□ -1.02
SCAF1-203ENST00000598359 LEPROTO15243 131 aa8.69□□□□□ -1.02
SCAF1-203ENST00000598359 UBE2D1P51668 147 aa8.69□□□□□ -1.02
SCAF1-203ENST00000598359 CD164L2Q6UWJ8 174 aa8.69□□□□□ -1.02
SCAF1-203ENST00000598359 PLAC8Q9NZF1 115 aa8.69□□□□□ -1.02
SCAF1-203ENST00000598359 RNF213Q63HN8 5207 aa8.69□□□□□ -1.02
SCAF1-203ENST00000598359 A6NDN8 102 aa8.67□□□□□ -1.02
SCAF1-203ENST00000598359 ZNF815PA8K554 130 aa8.67□□□□□ -1.02
SCAF1-203ENST00000598359 TAX1BP3O14907 124 aa8.67□□□□□ -1.02
SCAF1-203ENST00000598359 OXTP01178 125 aa8.67□□□□□ -1.02
SCAF1-203ENST00000598359 TSPEAR-AS2P59090 65 aa8.67□□□□□ -1.02
SCAF1-203ENST00000598359 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
SCAF1-203ENST00000598359 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
SCAF1-203ENST00000598359 J3QQQ9 107 aa8.66□□□□□ -1.02
SCAF1-203ENST00000598359 ZNF561-AS1K7EIQ3 104 aa8.66□□□□□ -1.02
SCAF1-203ENST00000598359 C5orf38Q86SI9 138 aa8.66□□□□□ -1.02
SCAF1-203ENST00000598359 COX7A2LO14548 114 aa8.65□□□□□ -1.02
SCAF1-203ENST00000598359 MALP21145 153 aa8.65□□□□□ -1.02
SCAF1-203ENST00000598359 SYCNQ0VAF6 134 aa8.65□□□□□ -1.02
SCAF1-203ENST00000598359 CEND1Q8N111 149 aa8.65□□□□□ -1.02
SCAF1-203ENST00000598359 SPANXB1Q9NS25 103 aaPredicted RBP8.65□□□□□ -1.02
SCAF1-203ENST00000598359 H3BRM9 83 aa8.64□□□□□ -1.03
SCAF1-203ENST00000598359 LGALS3P17931 250 aaKnown RBP8.64□□□□□ -1.03
SCAF1-203ENST00000598359 HERVK_113P63121 156 aa8.64□□□□□ -1.03
SCAF1-203ENST00000598359 Q6ZRU5 148 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms