RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 COX7A2LO14548 114 aa9.57□□□□□ -0.88
TGFB1-202ENST00000597453 LINC00614P0C842 121 aa9.57□□□□□ -0.88
TGFB1-202ENST00000597453 UQCR10Q9UDW1 63 aa9.57□□□□□ -0.88
TGFB1-202ENST00000597453 Q6ZN92 141 aa9.56□□□□□ -0.88
TGFB1-202ENST00000597453 FAM19A2Q8N3H0 131 aa9.56□□□□□ -0.88
TGFB1-202ENST00000597453 TOMM6Q96B49 74 aa9.56□□□□□ -0.88
TGFB1-202ENST00000597453 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
TGFB1-202ENST00000597453 PAM16Q9Y3D7 125 aa9.56□□□□□ -0.88
TGFB1-202ENST00000597453 IGKV2-24A0A0C4DH68 120 aa9.55□□□□□ -0.88
TGFB1-202ENST00000597453 LINC01549A6NIU2 74 aa9.55□□□□□ -0.88
TGFB1-202ENST00000597453 MALP21145 153 aa9.55□□□□□ -0.88
TGFB1-202ENST00000597453 SPATA45Q537H7 98 aa9.55□□□□□ -0.88
TGFB1-202ENST00000597453 PET117Q6UWS5 81 aa9.55□□□□□ -0.88
TGFB1-202ENST00000597453 Q6ZRU5 148 aa9.55□□□□□ -0.88
TGFB1-202ENST00000597453 FA2HQ7L5A8 372 aa9.55□□□□□ -0.88
TGFB1-202ENST00000597453 TIMM17AQ99595 171 aa9.55□□□□□ -0.88
TGFB1-202ENST00000597453 IGLC3P0DOY3 106 aa9.54□□□□□ -0.88
TGFB1-202ENST00000597453 AMELXQ99217 191 aa9.54□□□□□ -0.88
TGFB1-202ENST00000597453 HSPB8Q9UJY1 196 aa9.54□□□□□ -0.88
TGFB1-202ENST00000597453 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 A0A1B0GV90 55 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 LEPROTL1O95214 131 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 APOMO95445 188 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 MAJINQ3KP22 176 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 PAPPA-AS1Q5QFB9 102 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 LINC00173Q6ZV60 143 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 ERASQ7Z444 233 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 C5orf38Q86SI9 138 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 VCX2Q9H322 139 aa9.53□□□□□ -0.88
TGFB1-202ENST00000597453 A0A096LNI7 61 aa9.52□□□□□ -0.89
TGFB1-202ENST00000597453 UBE2D1P51668 147 aa9.52□□□□□ -0.89
TGFB1-202ENST00000597453 LINC00242Q5T6M2 205 aa9.52□□□□□ -0.89
TGFB1-202ENST00000597453 LINC00526Q96FQ7 95 aa9.52□□□□□ -0.89
TGFB1-202ENST00000597453 SYS1-DBNDD2H3BUS1 97 aa9.51□□□□□ -0.89
TGFB1-202ENST00000597453 ZNF561-AS1K7EIQ3 104 aa9.51□□□□□ -0.89
TGFB1-202ENST00000597453 STPG4Q8N801 248 aa9.51□□□□□ -0.89
TGFB1-202ENST00000597453 C7orf33Q8WU49 177 aa9.51□□□□□ -0.89
TGFB1-202ENST00000597453 SCGB3A1Q96QR1 104 aa9.51□□□□□ -0.89
TGFB1-202ENST00000597453 MAP1LC3CQ9BXW4 147 aa9.51□□□□□ -0.89
TGFB1-202ENST00000597453 ZC2HC1BQ5TFG8 222 aa9.5□□□□□ -0.89
TGFB1-202ENST00000597453 FAM19A3Q7Z5A8 133 aa9.5□□□□□ -0.89
TGFB1-202ENST00000597453 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
TGFB1-202ENST00000597453 A0A087WZ39 114 aa9.49□□□□□ -0.89
TGFB1-202ENST00000597453 PRR3P79522 188 aaKnown RBP9.49□□□□□ -0.89
TGFB1-202ENST00000597453 CARD19Q96LW7 228 aa9.49□□□□□ -0.89
TGFB1-202ENST00000597453 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
TGFB1-202ENST00000597453 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
TGFB1-202ENST00000597453 LINC01545Q5VT33 79 aa9.48□□□□□ -0.89
TGFB1-202ENST00000597453 ORAOV1Q8WV07 137 aa9.48□□□□□ -0.89
TGFB1-202ENST00000597453 C2orf48Q96LS8 159 aa9.48□□□□□ -0.89
TGFB1-202ENST00000597453 A0A096LNJ9 63 aa9.47□□□□□ -0.89
TGFB1-202ENST00000597453 SEC11AP67812 179 aa9.47□□□□□ -0.89
TGFB1-202ENST00000597453 COL5A1-AS1Q5SY13 56 aa9.47□□□□□ -0.89
TGFB1-202ENST00000597453 PKIGQ9Y2B9 76 aa9.47□□□□□ -0.89
TGFB1-202ENST00000597453 HSBP1L1C9JCN9 74 aa9.46□□□□□ -0.9
TGFB1-202ENST00000597453 HBDP02042 147 aa9.46□□□□□ -0.9
TGFB1-202ENST00000597453 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
TGFB1-202ENST00000597453 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
TGFB1-202ENST00000597453 LRP2P98164 4655 aa9.46□□□□□ -0.9
TGFB1-202ENST00000597453 F8WDY8 70 aa9.45□□□□□ -0.9
TGFB1-202ENST00000597453 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.45□□□□□ -0.9
TGFB1-202ENST00000597453 HERVK_113P63121 156 aa9.45□□□□□ -0.9
TGFB1-202ENST00000597453 PMCHL2Q9BQD1 86 aa9.45□□□□□ -0.9
TGFB1-202ENST00000597453 PMVKQ15126 192 aa9.44□□□□□ -0.9
TGFB1-202ENST00000597453 CST9LQ9H4G1 147 aa9.44□□□□□ -0.9
TGFB1-202ENST00000597453 LINC00474Q9P2X8 69 aa9.44□□□□□ -0.9
TGFB1-202ENST00000597453 GEMIN7Q9H840 131 aaKnown RBP9.43□□□□□ -0.9
TGFB1-202ENST00000597453 A0A0J9YXV3 536 aa9.42□□□□□ -0.9
TGFB1-202ENST00000597453 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
TGFB1-202ENST00000597453 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
TGFB1-202ENST00000597453 ODF1Q14990 250 aa9.42□□□□□ -0.9
TGFB1-202ENST00000597453 LINC01600Q96MT4 127 aa9.42□□□□□ -0.9
TGFB1-202ENST00000597453 MRPL35Q9NZE8 188 aaKnown RBP9.42□□□□□ -0.9
TGFB1-202ENST00000597453 LOC107984640A0A0U1RRK4 108 aa9.41□□□□□ -0.9
TGFB1-202ENST00000597453 NDUFA1O15239 70 aa9.41□□□□□ -0.9
TGFB1-202ENST00000597453 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
TGFB1-202ENST00000597453 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
TGFB1-202ENST00000597453 ATOH7Q8N100 152 aa9.41□□□□□ -0.9
TGFB1-202ENST00000597453 CDKN2A-AS1Q9UH64 79 aa9.41□□□□□ -0.9
TGFB1-202ENST00000597453 IGLV5-45A0A087WSX0 123 aa9.4□□□□□ -0.9
TGFB1-202ENST00000597453 ATP5LO75964 103 aa9.4□□□□□ -0.9
TGFB1-202ENST00000597453 SLC25A34Q6PIV7 304 aa9.4□□□□□ -0.9
TGFB1-202ENST00000597453 GAGE2BQ13066 116 aa9.39□□□□□ -0.91
TGFB1-202ENST00000597453 DLEU1O43261 78 aa9.38□□□□□ -0.91
TGFB1-202ENST00000597453 C10orf25Q5T742 122 aa9.38□□□□□ -0.91
TGFB1-202ENST00000597453 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
TGFB1-202ENST00000597453 UNQ6190/PRO20217Q6UXQ8 127 aa9.38□□□□□ -0.91
TGFB1-202ENST00000597453 Q8IZM0 81 aa9.38□□□□□ -0.91
TGFB1-202ENST00000597453 A0A1W2PNN7 141 aa9.37□□□□□ -0.91
TGFB1-202ENST00000597453 SMIM1B2RUZ4 78 aa9.37□□□□□ -0.91
TGFB1-202ENST00000597453 PRSS2P07478 247 aa9.37□□□□□ -0.91
TGFB1-202ENST00000597453 COX8AP10176 69 aa9.37□□□□□ -0.91
TGFB1-202ENST00000597453 SRSF9Q13242 221 aaKnown RBP eCLIP9.37□□□□□ -0.91
TGFB1-202ENST00000597453 Q6ZRP5 223 aa9.37□□□□□ -0.91
TGFB1-202ENST00000597453 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
TGFB1-202ENST00000597453 C6orf48Q9UBA6 75 aa9.37□□□□□ -0.91
TGFB1-202ENST00000597453 RNF213Q63HN8 5207 aa9.36□□□□□ -0.91
TGFB1-202ENST00000597453 TRBV30A0A0K0K1B3 111 aa9.36□□□□□ -0.91
TGFB1-202ENST00000597453 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
TGFB1-202ENST00000597453 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms