RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 PSCAO43653 123 aa8.67□□□□□ -1.02
SHKBP1-209ENST00000595803 Q8IZM0 81 aa8.67□□□□□ -1.02
SHKBP1-209ENST00000595803 HNRNPA3P51991 378 aaKnown RBP8.66□□□□□ -1.02
SHKBP1-209ENST00000595803 CKS1BP61024 79 aa8.66□□□□□ -1.02
SHKBP1-209ENST00000595803 SPAG11BQ08648 103 aa8.66□□□□□ -1.02
SHKBP1-209ENST00000595803 SCGB1D4Q6XE38 83 aa8.66□□□□□ -1.02
SHKBP1-209ENST00000595803 FAT2Q9NYQ8 4349 aa8.65□□□□□ -1.02
SHKBP1-209ENST00000595803 ZNF561-AS1K7EIQ3 104 aa8.65□□□□□ -1.02
SHKBP1-209ENST00000595803 NDUFA1O15239 70 aa8.65□□□□□ -1.02
SHKBP1-209ENST00000595803 CXCL5P42830 114 aa8.64□□□□□ -1.03
SHKBP1-209ENST00000595803 HERV-K104P63124 156 aa8.64□□□□□ -1.03
SHKBP1-209ENST00000595803 KIAA0087Q14695 138 aa8.64□□□□□ -1.03
SHKBP1-209ENST00000595803 HIGD2BQ4VC39 106 aa8.64□□□□□ -1.03
SHKBP1-209ENST00000595803 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
SHKBP1-209ENST00000595803 Q6ZR54 194 aa8.64□□□□□ -1.03
SHKBP1-209ENST00000595803 HSPG2P98160 4391 aa8.64□□□□□ -1.03
SHKBP1-209ENST00000595803 USP17L23D6RBM5 183 aa8.63□□□□□ -1.03
SHKBP1-209ENST00000595803 DDTP30046 118 aa8.63□□□□□ -1.03
SHKBP1-209ENST00000595803 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
SHKBP1-209ENST00000595803 LINC00336Q6ZUF6 198 aa8.63□□□□□ -1.03
SHKBP1-209ENST00000595803 C6orf223Q8N319 242 aa8.63□□□□□ -1.03
SHKBP1-209ENST00000595803 ZNF625Q96I27 306 aaPredicted RBP8.63□□□□□ -1.03
SHKBP1-209ENST00000595803 TP73-AS1Q9UF72 201 aa8.63□□□□□ -1.03
SHKBP1-209ENST00000595803 DNAH2Q9P225 4427 aa8.63□□□□□ -1.03
SHKBP1-209ENST00000595803 UBR4Q5T4S7 5183 aa8.62□□□□□ -1.03
SHKBP1-209ENST00000595803 A0A0J9YXY3 114 aa8.62□□□□□ -1.03
SHKBP1-209ENST00000595803 C15orf56Q8N910 161 aa8.62□□□□□ -1.03
SHKBP1-209ENST00000595803 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
SHKBP1-209ENST00000595803 HIGD1BQ9P298 99 aa8.62□□□□□ -1.03
SHKBP1-209ENST00000595803 LINC00587B1AMM8 73 aa8.61□□□□□ -1.03
SHKBP1-209ENST00000595803 F8WDY8 70 aa8.61□□□□□ -1.03
SHKBP1-209ENST00000595803 MEIG1Q5JSS6 88 aa8.61□□□□□ -1.03
SHKBP1-209ENST00000595803 C2orf82Q6UX34 121 aa8.61□□□□□ -1.03
SHKBP1-209ENST00000595803 C2orf91Q6ZV80 131 aa8.61□□□□□ -1.03
SHKBP1-209ENST00000595803 LINC00526Q96FQ7 95 aa8.61□□□□□ -1.03
SHKBP1-209ENST00000595803 C2orf48Q96LS8 159 aa8.61□□□□□ -1.03
SHKBP1-209ENST00000595803 DNAH6Q9C0G6 4158 aa8.61□□□□□ -1.03
SHKBP1-209ENST00000595803 DYNC1H1Q14204 4646 aaKnown RBP8.6□□□□□ -1.03
SHKBP1-209ENST00000595803 GVQW2A0A096LPI5 108 aaPredicted RBP8.6□□□□□ -1.03
SHKBP1-209ENST00000595803 CTAG1AP78358 180 aa8.6□□□□□ -1.03
SHKBP1-209ENST00000595803 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
SHKBP1-209ENST00000595803 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
SHKBP1-209ENST00000595803 DNAH11Q96DT5 4516 aa8.59□□□□□ -1.03
SHKBP1-209ENST00000595803 DMBT1Q9UGM3 2413 aaPredicted RBP8.59□□□□□ -1.03
SHKBP1-209ENST00000595803 LECT2O14960 151 aa8.59□□□□□ -1.03
SHKBP1-209ENST00000595803 SRSF9Q13242 221 aaKnown RBP eCLIP8.59□□□□□ -1.03
SHKBP1-209ENST00000595803 C14orf177Q52M58 125 aa8.59□□□□□ -1.03
SHKBP1-209ENST00000595803 UNQ6190/PRO20217Q6UXQ8 127 aa8.59□□□□□ -1.03
SHKBP1-209ENST00000595803 TMEM238C9JI98 176 aa8.58□□□□□ -1.04
SHKBP1-209ENST00000595803 TIMM17BO60830 172 aa8.58□□□□□ -1.04
SHKBP1-209ENST00000595803 LINC00158P58513 81 aa8.58□□□□□ -1.04
SHKBP1-209ENST00000595803 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
SHKBP1-209ENST00000595803 HIST1H4GQ99525 98 aa8.58□□□□□ -1.04
SHKBP1-209ENST00000595803 A0A0U1RRA0 63 aa8.57□□□□□ -1.04
SHKBP1-209ENST00000595803 SMIM13P0DJ93 91 aa8.57□□□□□ -1.04
SHKBP1-209ENST00000595803 SYCNQ0VAF6 134 aa8.57□□□□□ -1.04
SHKBP1-209ENST00000595803 TAL2Q16559 108 aa8.57□□□□□ -1.04
SHKBP1-209ENST00000595803 SPANXB1Q9NS25 103 aaPredicted RBP8.57□□□□□ -1.04
SHKBP1-209ENST00000595803 ERG28Q9UKR5 140 aa8.57□□□□□ -1.04
SHKBP1-209ENST00000595803 PFN2P35080 140 aa8.56□□□□□ -1.04
SHKBP1-209ENST00000595803 HSD52Q0P140 79 aa8.56□□□□□ -1.04
SHKBP1-209ENST00000595803 C10orf25Q5T742 122 aa8.56□□□□□ -1.04
SHKBP1-209ENST00000595803 PKD1P98161 4303 aa8.56□□□□□ -1.04
SHKBP1-209ENST00000595803 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
SHKBP1-209ENST00000595803 WFDC2Q14508 124 aa8.55□□□□□ -1.04
SHKBP1-209ENST00000595803 ADAMTSL4-AS1Q5T5F5 129 aa8.55□□□□□ -1.04
SHKBP1-209ENST00000595803 Q6ZRU5 148 aa8.55□□□□□ -1.04
SHKBP1-209ENST00000595803 Q6ZVH6 145 aa8.55□□□□□ -1.04
SHKBP1-209ENST00000595803 LRCOL1A6NCL2 159 aa8.54□□□□□ -1.04
SHKBP1-209ENST00000595803 COX17Q14061 63 aa8.54□□□□□ -1.04
SHKBP1-209ENST00000595803 LITAFQ99732 161 aa8.54□□□□□ -1.04
SHKBP1-209ENST00000595803 SPANXDQ9BXN6 97 aa8.54□□□□□ -1.04
SHKBP1-209ENST00000595803 SPANXCQ9NY87 97 aa8.54□□□□□ -1.04
SHKBP1-209ENST00000595803 C6orf48Q9UBA6 75 aa8.54□□□□□ -1.04
SHKBP1-209ENST00000595803 GCSHP23434 173 aa8.53□□□□□ -1.04
SHKBP1-209ENST00000595803 HINT1P49773 126 aaPredicted RBP8.53□□□□□ -1.04
SHKBP1-209ENST00000595803 RNF151Q2KHN1 245 aa8.53□□□□□ -1.04
SHKBP1-209ENST00000595803 C9orf116Q5BN46 136 aaPredicted RBP8.53□□□□□ -1.04
SHKBP1-209ENST00000595803 MUSTN1Q8IVN3 82 aa8.53□□□□□ -1.04
SHKBP1-209ENST00000595803 CARD19Q96LW7 228 aa8.53□□□□□ -1.04
SHKBP1-209ENST00000595803 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.52□□□□□ -1.05
SHKBP1-209ENST00000595803 M0R143 59 aa8.52□□□□□ -1.05
SHKBP1-209ENST00000595803 IFITM1P13164 125 aa8.52□□□□□ -1.05
SHKBP1-209ENST00000595803 CEND1Q8N111 149 aa8.52□□□□□ -1.05
SHKBP1-209ENST00000595803 MIR7-3HGQ8N6C7 128 aa8.52□□□□□ -1.05
SHKBP1-209ENST00000595803 DAND5Q8N907 189 aa8.52□□□□□ -1.05
SHKBP1-209ENST00000595803 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
SHKBP1-209ENST00000595803 DNAH17Q9UFH2 4485 aa8.51□□□□□ -1.05
SHKBP1-209ENST00000595803 A0A087WTM6 91 aa8.51□□□□□ -1.05
SHKBP1-209ENST00000595803 EREGO14944 169 aa8.51□□□□□ -1.05
SHKBP1-209ENST00000595803 SLPIP03973 132 aa8.51□□□□□ -1.05
SHKBP1-209ENST00000595803 PTTG1IPP53801 180 aa8.51□□□□□ -1.05
SHKBP1-209ENST00000595803 NPC2P61916 151 aa8.51□□□□□ -1.05
SHKBP1-209ENST00000595803 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.5□□□□□ -1.05
SHKBP1-209ENST00000595803 BATFQ16520 125 aa8.5□□□□□ -1.05
SHKBP1-209ENST00000595803 Q8N814 137 aa8.5□□□□□ -1.05
SHKBP1-209ENST00000595803 LINC00308Q8TCZ7 52 aa8.5□□□□□ -1.05
SHKBP1-209ENST00000595803 RTL8CO15255 209 aa8.49□□□□□ -1.05
SHKBP1-209ENST00000595803 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
SHKBP1-209ENST00000595803 RPL24P83731 157 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms