RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 E9PLD3 99 aa10.66□□□□□ -0.7
SYMPK-204ENST00000593959 H3BRM9 83 aa10.66□□□□□ -0.7
SYMPK-204ENST00000593959 CCL25O15444 150 aa10.66□□□□□ -0.7
SYMPK-204ENST00000593959 HNRNPA3P51991 378 aaKnown RBP10.66□□□□□ -0.7
SYMPK-204ENST00000593959 HERVK_113P63121 156 aa10.66□□□□□ -0.7
SYMPK-204ENST00000593959 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
SYMPK-204ENST00000593959 NMUP48645 174 aa10.65□□□□□ -0.7
SYMPK-204ENST00000593959 UBE2D1P51668 147 aa10.65□□□□□ -0.7
SYMPK-204ENST00000593959 FAM19A3Q7Z5A8 133 aa10.65□□□□□ -0.7
SYMPK-204ENST00000593959 TRAV8-4A0A0B4J246 113 aa10.64□□□□□ -0.71
SYMPK-204ENST00000593959 REG3AQ06141 175 aa10.64□□□□□ -0.71
SYMPK-204ENST00000593959 C9orf163Q8N9P6 203 aa10.64□□□□□ -0.71
SYMPK-204ENST00000593959 A0A0J9YXV3 536 aa10.63□□□□□ -0.71
SYMPK-204ENST00000593959 KRTAP29-1A8MX34 341 aaPredicted RBP10.63□□□□□ -0.71
SYMPK-204ENST00000593959 BOD1L2Q8IYS8 172 aa10.63□□□□□ -0.71
SYMPK-204ENST00000593959 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
SYMPK-204ENST00000593959 IGLV4-60A0A075B6I1 120 aa10.62□□□□□ -0.71
SYMPK-204ENST00000593959 CLPSL2Q6UWE3 100 aa10.62□□□□□ -0.71
SYMPK-204ENST00000593959 PLEKHB2Q96CS7 222 aa10.62□□□□□ -0.71
SYMPK-204ENST00000593959 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
SYMPK-204ENST00000593959 TMEM223A0PJW6 202 aa10.61□□□□□ -0.71
SYMPK-204ENST00000593959 ZNF22P17026 224 aaPredicted RBP10.61□□□□□ -0.71
SYMPK-204ENST00000593959 CNBPP62633 177 aaKnown RBP10.61□□□□□ -0.71
SYMPK-204ENST00000593959 LINC00469Q8N7U9 141 aa10.61□□□□□ -0.71
SYMPK-204ENST00000593959 TRAV13-1A0A0B4J241 112 aa10.6□□□□□ -0.71
SYMPK-204ENST00000593959 LINC00587B1AMM8 73 aa10.6□□□□□ -0.71
SYMPK-204ENST00000593959 LEPROTO15243 131 aa10.6□□□□□ -0.71
SYMPK-204ENST00000593959 SS18Q15532 418 aa10.6□□□□□ -0.71
SYMPK-204ENST00000593959 RNASE13Q5GAN3 156 aaKnown RBP10.6□□□□□ -0.71
SYMPK-204ENST00000593959 SDIM1Q6ZPB5 146 aa10.6□□□□□ -0.71
SYMPK-204ENST00000593959 IGLV5-45A0A087WSX0 123 aa10.59□□□□□ -0.71
SYMPK-204ENST00000593959 LGALS3P17931 250 aaKnown RBP10.59□□□□□ -0.71
SYMPK-204ENST00000593959 IGLV10-54A0A075B6I4 117 aa10.58□□□□□ -0.72
SYMPK-204ENST00000593959 MYMXA0A1B0GTQ4 84 aa10.58□□□□□ -0.72
SYMPK-204ENST00000593959 M0R143 59 aa10.58□□□□□ -0.72
SYMPK-204ENST00000593959 LINC00242Q5T6M2 205 aa10.58□□□□□ -0.72
SYMPK-204ENST00000593959 IGKV2D-26A0A0A0MRZ7 120 aa10.57□□□□□ -0.72
SYMPK-204ENST00000593959 CTAG1AP78358 180 aa10.57□□□□□ -0.72
SYMPK-204ENST00000593959 CIRBPQ14011 172 aaKnown RBP10.57□□□□□ -0.72
SYMPK-204ENST00000593959 LBHQ53QV2 105 aaPredicted RBP10.57□□□□□ -0.72
SYMPK-204ENST00000593959 HIGD1BQ9P298 99 aa10.57□□□□□ -0.72
SYMPK-204ENST00000593959 PKHD1L1Q86WI1 4243 aa10.57□□□□□ -0.72
SYMPK-204ENST00000593959 IGHV1-58A0A0C4DH39 117 aa10.56□□□□□ -0.72
SYMPK-204ENST00000593959 J3QQQ9 107 aa10.56□□□□□ -0.72
SYMPK-204ENST00000593959 SLPIP03973 132 aa10.56□□□□□ -0.72
SYMPK-204ENST00000593959 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
SYMPK-204ENST00000593959 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.56□□□□□ -0.72
SYMPK-204ENST00000593959 LINC00959A0A1B0GUT2 108 aa10.55□□□□□ -0.72
SYMPK-204ENST00000593959 ZNF815PA8K554 130 aa10.55□□□□□ -0.72
SYMPK-204ENST00000593959 PANO1I0J062 215 aa10.55□□□□□ -0.72
SYMPK-204ENST00000593959 J3QL48 77 aa10.55□□□□□ -0.72
SYMPK-204ENST00000593959 CDKN2A-AS1Q9UH64 79 aa10.54□□□□□ -0.72
SYMPK-204ENST00000593959 HMCN2Q8NDA2 5059 aa10.54□□□□□ -0.72
SYMPK-204ENST00000593959 SCGB1D4Q6XE38 83 aa10.53□□□□□ -0.72
SYMPK-204ENST00000593959 LINC01561Q8N1V8 128 aa10.53□□□□□ -0.72
SYMPK-204ENST00000593959 IGKV3OR2-268A0A0C4DH90 116 aa10.52□□□□□ -0.73
SYMPK-204ENST00000593959 OXTP01178 125 aa10.52□□□□□ -0.73
SYMPK-204ENST00000593959 HSD52Q0P140 79 aa10.52□□□□□ -0.73
SYMPK-204ENST00000593959 TAL2Q16559 108 aa10.52□□□□□ -0.73
SYMPK-204ENST00000593959 SFTA2Q6UW10 78 aa10.52□□□□□ -0.73
SYMPK-204ENST00000593959 C15orf56Q8N910 161 aa10.51□□□□□ -0.73
SYMPK-204ENST00000593959 IGLV5-39A0A0G2JS06 123 aa10.5□□□□□ -0.73
SYMPK-204ENST00000593959 SPINK8P0C7L1 97 aa10.5□□□□□ -0.73
SYMPK-204ENST00000593959 COX6A2Q02221 97 aa10.5□□□□□ -0.73
SYMPK-204ENST00000593959 C2orf91Q6ZV80 131 aa10.5□□□□□ -0.73
SYMPK-204ENST00000593959 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
SYMPK-204ENST00000593959 A0A087WZ39 114 aa10.49□□□□□ -0.73
SYMPK-204ENST00000593959 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.49□□□□□ -0.73
SYMPK-204ENST00000593959 IGHV3OR16-9A0A0B4J2B5 98 aa10.49□□□□□ -0.73
SYMPK-204ENST00000593959 GAGE12HA6NDE8 117 aa10.49□□□□□ -0.73
SYMPK-204ENST00000593959 RPL37AP61513 92 aaKnown RBP10.49□□□□□ -0.73
SYMPK-204ENST00000593959 CD164L2Q6UWJ8 174 aa10.49□□□□□ -0.73
SYMPK-204ENST00000593959 CFAP161Q6P656 301 aa10.48□□□□□ -0.73
SYMPK-204ENST00000593959 CHCHD10Q8WYQ3 142 aaPredicted RBP10.48□□□□□ -0.73
SYMPK-204ENST00000593959 COL5A1-AS1Q5SY13 56 aa10.47□□□□□ -0.73
SYMPK-204ENST00000593959 HIST1H4GQ99525 98 aa10.47□□□□□ -0.73
SYMPK-204ENST00000593959 NDUFA12Q9UI09 145 aa10.47□□□□□ -0.73
SYMPK-204ENST00000593959 GVQW2A0A096LPI5 108 aaPredicted RBP10.46□□□□□ -0.73
SYMPK-204ENST00000593959 SMIM1B2RUZ4 78 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 TMEM238C9JI98 176 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 COX7A2LO14548 114 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 APOMO95445 188 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 XCL1P47992 114 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 HERV-K104P63124 156 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 SPACA4Q8TDM5 124 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 SNHG12Q9BXW3 62 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 TTTY13Q9BZ97 58 aa10.46□□□□□ -0.73
SYMPK-204ENST00000593959 A6NDN8 102 aa10.45□□□□□ -0.74
SYMPK-204ENST00000593959 NDUFA1O15239 70 aa10.45□□□□□ -0.74
SYMPK-204ENST00000593959 HINT1P49773 126 aaPredicted RBP10.45□□□□□ -0.74
SYMPK-204ENST00000593959 FOXI1Q12951 378 aa10.45□□□□□ -0.74
SYMPK-204ENST00000593959 SRSF9Q13242 221 aaKnown RBP eCLIP10.45□□□□□ -0.74
SYMPK-204ENST00000593959 BATFQ16520 125 aa10.45□□□□□ -0.74
SYMPK-204ENST00000593959 Q6ZVH6 145 aa10.45□□□□□ -0.74
SYMPK-204ENST00000593959 A0A087WYN8 130 aa10.44□□□□□ -0.74
SYMPK-204ENST00000593959 PRSS2P07478 247 aa10.44□□□□□ -0.74
SYMPK-204ENST00000593959 MALP21145 153 aa10.44□□□□□ -0.74
SYMPK-204ENST00000593959 TSPEAR-AS2P59090 65 aa10.44□□□□□ -0.74
SYMPK-204ENST00000593959 COPS9Q8WXC6 57 aa10.44□□□□□ -0.74
SYMPK-204ENST00000593959 SPANXB1Q9NS25 103 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms