RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 CCKP06307 115 aa9.1□□□□□ -0.95
DNMT1-228ENST00000592705 C5orf47Q569G3 176 aa9.09□□□□□ -0.95
DNMT1-228ENST00000592705 Q6ZSN1 163 aa9.08□□□□□ -0.96
DNMT1-228ENST00000592705 NDUFC1O43677 76 aa9.08□□□□□ -0.96
DNMT1-228ENST00000592705 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.08□□□□□ -0.96
DNMT1-228ENST00000592705 LINC00526Q96FQ7 95 aa9.07□□□□□ -0.96
DNMT1-228ENST00000592705 FAM19A4Q96LR4 140 aa9.07□□□□□ -0.96
DNMT1-228ENST00000592705 ANKRD17O75179 2603 aaKnown RBP9.07□□□□□ -0.96
DNMT1-228ENST00000592705 H0Y9J4 135 aa9.07□□□□□ -0.96
DNMT1-228ENST00000592705 ZNF73O43830 326 aaPredicted RBP9.07□□□□□ -0.96
DNMT1-228ENST00000592705 DHRS4-AS1Q9P1J3 65 aa9.06□□□□□ -0.96
DNMT1-228ENST00000592705 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
DNMT1-228ENST00000592705 IGLV4-60A0A075B6I1 120 aa9.05□□□□□ -0.96
DNMT1-228ENST00000592705 LINC00315P59091 139 aa9.05□□□□□ -0.96
DNMT1-228ENST00000592705 FHL2Q14192 279 aa9.05□□□□□ -0.96
DNMT1-228ENST00000592705 Q8N814 137 aa9.05□□□□□ -0.96
DNMT1-228ENST00000592705 CYSRT1A8MQ03 144 aa9.05□□□□□ -0.96
DNMT1-228ENST00000592705 MGAM2Q2M2H8 2515 aa9.05□□□□□ -0.96
DNMT1-228ENST00000592705 A0A087WYN8 130 aa9.04□□□□□ -0.96
DNMT1-228ENST00000592705 GOLGB1Q14789 3259 aaKnown RBP9.04□□□□□ -0.96
DNMT1-228ENST00000592705 CHKB-CPT1BH3BT56 60 aa9.04□□□□□ -0.96
DNMT1-228ENST00000592705 NTM-AS1Q6ZSK4 140 aa9.04□□□□□ -0.96
DNMT1-228ENST00000592705 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
DNMT1-228ENST00000592705 Q8N2B8 174 aa9.03□□□□□ -0.96
DNMT1-228ENST00000592705 MDFIQ99750 246 aa9.03□□□□□ -0.96
DNMT1-228ENST00000592705 IGKV2-28A0A075B6P5 120 aa9.02□□□□□ -0.96
DNMT1-228ENST00000592705 C3orf84H3BNL1 204 aa9.02□□□□□ -0.96
DNMT1-228ENST00000592705 IGKV2D-28P01615 120 aa9.02□□□□□ -0.96
DNMT1-228ENST00000592705 BRK1Q8WUW1 75 aa9.02□□□□□ -0.96
DNMT1-228ENST00000592705 CDIP1Q9H305 208 aa9.02□□□□□ -0.96
DNMT1-228ENST00000592705 MAST4O15021 2626 aa9.02□□□□□ -0.97
DNMT1-228ENST00000592705 UNQ6190/PRO20217Q6UXQ8 127 aa9.01□□□□□ -0.97
DNMT1-228ENST00000592705 FAM229AH3BQW9 127 aa9□□□□□ -0.97
DNMT1-228ENST00000592705 A0A1B0GUV1 79 aa9□□□□□ -0.97
DNMT1-228ENST00000592705 FAM19A3Q7Z5A8 133 aa9□□□□□ -0.97
DNMT1-228ENST00000592705 IGLV5-39A0A0G2JS06 123 aa9□□□□□ -0.97
DNMT1-228ENST00000592705 LINC01561Q8N1V8 128 aa9□□□□□ -0.97
DNMT1-228ENST00000592705 SNURFQ9Y675 71 aa9□□□□□ -0.97
DNMT1-228ENST00000592705 EGFEM1PQ0D2K5 195 aa8.99□□□□□ -0.97
DNMT1-228ENST00000592705 PLAC8L1A1L4L8 177 aa8.99□□□□□ -0.97
DNMT1-228ENST00000592705 C11orf72Q8NBR9 251 aa8.99□□□□□ -0.97
DNMT1-228ENST00000592705 C9orf116Q5BN46 136 aaPredicted RBP8.98□□□□□ -0.97
DNMT1-228ENST00000592705 MPLKIPQ8TAP9 179 aa8.98□□□□□ -0.97
DNMT1-228ENST00000592705 PRO0461Q9UI25 63 aa8.98□□□□□ -0.97
DNMT1-228ENST00000592705 TRAV7A0A075B6U4 112 aa8.97□□□□□ -0.97
DNMT1-228ENST00000592705 TRBV10-3A0A0K0K1G6 114 aa8.97□□□□□ -0.97
DNMT1-228ENST00000592705 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
DNMT1-228ENST00000592705 KLK9Q2XQG4 91 aa8.97□□□□□ -0.97
DNMT1-228ENST00000592705 HELZ2Q9BYK8 2649 aaKnown RBP8.97□□□□□ -0.97
DNMT1-228ENST00000592705 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
DNMT1-228ENST00000592705 CENPFP49454 3210 aa8.97□□□□□ -0.97
DNMT1-228ENST00000592705 A0A087WVE0 104 aa8.96□□□□□ -0.98
DNMT1-228ENST00000592705 TRBV7-7A0A0K0K1E9 115 aa8.95□□□□□ -0.98
DNMT1-228ENST00000592705 PPDPFQ9H3Y8 114 aa8.95□□□□□ -0.98
DNMT1-228ENST00000592705 SBSPONQ8IVN8 264 aa8.95□□□□□ -0.98
DNMT1-228ENST00000592705 LINC00337Q8N6G1 96 aa8.95□□□□□ -0.98
DNMT1-228ENST00000592705 PCSK5Q92824 1860 aa8.95□□□□□ -0.98
DNMT1-228ENST00000592705 IGKV4-1P06312 121 aa8.94□□□□□ -0.98
DNMT1-228ENST00000592705 WFDC10BQ8IUB3 73 aa8.94□□□□□ -0.98
DNMT1-228ENST00000592705 C16orf90A8MZG2 172 aa8.94□□□□□ -0.98
DNMT1-228ENST00000592705 C6orf223Q8N319 242 aa8.94□□□□□ -0.98
DNMT1-228ENST00000592705 PTPRBP23467 1997 aa8.94□□□□□ -0.98
DNMT1-228ENST00000592705 RPL37AP8A6NKH3 93 aa8.94□□□□□ -0.98
DNMT1-228ENST00000592705 IGLV5-45A0A087WSX0 123 aa8.93□□□□□ -0.98
DNMT1-228ENST00000592705 SPINK6Q6UWN8 80 aa8.93□□□□□ -0.98
DNMT1-228ENST00000592705 J3QL48 77 aa8.91□□□□□ -0.98
DNMT1-228ENST00000592705 V9GYY9 64 aa8.91□□□□□ -0.98
DNMT1-228ENST00000592705 ATRQ13535 2644 aa8.91□□□□□ -0.98
DNMT1-228ENST00000592705 USP24Q9UPU5 2620 aa8.91□□□□□ -0.98
DNMT1-228ENST00000592705 F8WDY8 70 aa8.91□□□□□ -0.98
DNMT1-228ENST00000592705 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
DNMT1-228ENST00000592705 LINC00846Q9NV44 126 aa8.91□□□□□ -0.98
DNMT1-228ENST00000592705 LYPD5Q6UWN5 251 aa8.9□□□□□ -0.99
DNMT1-228ENST00000592705 AGRNO00468 2067 aa8.9□□□□□ -0.99
DNMT1-228ENST00000592705 C1orf137Q5JT78 98 aa8.89□□□□□ -0.99
DNMT1-228ENST00000592705 WFDC13Q8IUB5 93 aa8.89□□□□□ -0.99
DNMT1-228ENST00000592705 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
DNMT1-228ENST00000592705 IGHV3OR16-9A0A0B4J2B5 98 aa8.89□□□□□ -0.99
DNMT1-228ENST00000592705 SMIM26A0A096LP01 95 aa8.89□□□□□ -0.99
DNMT1-228ENST00000592705 COL27A1Q8IZC6 1860 aaPredicted RBP8.89□□□□□ -0.99
DNMT1-228ENST00000592705 IGLV9-49A0A0B4J1Y8 123 aa8.88□□□□□ -0.99
DNMT1-228ENST00000592705 LINC01556Q5JQF7 62 aa8.88□□□□□ -0.99
DNMT1-228ENST00000592705 C2orf48Q96LS8 159 aa8.88□□□□□ -0.99
DNMT1-228ENST00000592705 FAM30AQ9NZY2 134 aa8.87□□□□□ -0.99
DNMT1-228ENST00000592705 SETXQ7Z333 2677 aaKnown RBP8.86□□□□□ -0.99
DNMT1-228ENST00000592705 MRPL55Q7Z7F7 128 aaKnown RBP8.86□□□□□ -0.99
DNMT1-228ENST00000592705 Q8N3U1 123 aa8.86□□□□□ -0.99
DNMT1-228ENST00000592705 CASC2Q6XLA1 102 aa8.85□□□□□ -0.99
DNMT1-228ENST00000592705 Q6ZVQ6 151 aa8.85□□□□□ -0.99
DNMT1-228ENST00000592705 HRCT1Q6UXD1 115 aa8.85□□□□□ -0.99
DNMT1-228ENST00000592705 REG3GQ6UW15 175 aa8.83□□□□□ -1
DNMT1-228ENST00000592705 SOSTDC1Q6X4U4 206 aa8.83□□□□□ -1
DNMT1-228ENST00000592705 SPTSSBQ8NFR3 76 aa8.83□□□□□ -1
DNMT1-228ENST00000592705 CELA1Q9UNI1 258 aa8.83□□□□□ -1
DNMT1-228ENST00000592705 LINC01547P58512 204 aaPredicted RBP8.82□□□□□ -1
DNMT1-228ENST00000592705 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
DNMT1-228ENST00000592705 PLA2G1BP04054 148 aaKnown RBP8.82□□□□□ -1
DNMT1-228ENST00000592705 Q9UF83 564 aa8.82□□□□□ -1
DNMT1-228ENST00000592705 A0A0U1RQV1 116 aa8.81□□□□□ -1
DNMT1-228ENST00000592705 NBDYA0A0U1RRE5 68 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms