RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 ADIRFQ15847 76 aa11.33□□□□□ -0.6
PRKCSH-216ENST00000592445 ZC2HC1BQ5TFG8 222 aa11.33□□□□□ -0.6
PRKCSH-216ENST00000592445 F8VRH5 84 aa11.32□□□□□ -0.6
PRKCSH-216ENST00000592445 RPL23P62829 140 aaKnown RBP11.32□□□□□ -0.6
PRKCSH-216ENST00000592445 VCX2Q9H322 139 aa11.32□□□□□ -0.6
PRKCSH-216ENST00000592445 PPDPFQ9H3Y8 114 aa11.32□□□□□ -0.6
PRKCSH-216ENST00000592445 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
PRKCSH-216ENST00000592445 LINC01547P58512 204 aaPredicted RBP11.3□□□□□ -0.6
PRKCSH-216ENST00000592445 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
PRKCSH-216ENST00000592445 TMEM136Q6ZRR5 245 aa11.29□□□□□ -0.6
PRKCSH-216ENST00000592445 KRTAP13-1Q8IUC0 172 aa11.29□□□□□ -0.6
PRKCSH-216ENST00000592445 PRELID3AQ96N28 172 aa11.29□□□□□ -0.6
PRKCSH-216ENST00000592445 LOC389332A0A1B0GUA5 103 aa11.28□□□□□ -0.6
PRKCSH-216ENST00000592445 AMELXQ99217 191 aa11.28□□□□□ -0.6
PRKCSH-216ENST00000592445 CYSLTR1Q9Y271 337 aa11.28□□□□□ -0.6
PRKCSH-216ENST00000592445 CTAG1AP78358 180 aa11.27□□□□□ -0.61
PRKCSH-216ENST00000592445 CRCT1Q9UGL9 99 aa11.27□□□□□ -0.61
PRKCSH-216ENST00000592445 A0A1B0GXF2 115 aa11.26□□□□□ -0.61
PRKCSH-216ENST00000592445 PNRC1Q12796 327 aaPredicted RBP11.26□□□□□ -0.61
PRKCSH-216ENST00000592445 C2orf66Q6UXQ4 117 aa11.26□□□□□ -0.61
PRKCSH-216ENST00000592445 NKAPP1Q8N9T2 125 aa11.26□□□□□ -0.61
PRKCSH-216ENST00000592445 CDKN2A-AS1Q9UH64 79 aa11.26□□□□□ -0.61
PRKCSH-216ENST00000592445 NAT8Q9UHE5 227 aa11.26□□□□□ -0.61
PRKCSH-216ENST00000592445 CXCL5P42830 114 aa11.25□□□□□ -0.61
PRKCSH-216ENST00000592445 HERVK_113P63121 156 aa11.25□□□□□ -0.61
PRKCSH-216ENST00000592445 SEC11AP67812 179 aa11.24□□□□□ -0.61
PRKCSH-216ENST00000592445 FAM19A3Q7Z5A8 133 aa11.24□□□□□ -0.61
PRKCSH-216ENST00000592445 LINC00337Q8N6G1 96 aa11.24□□□□□ -0.61
PRKCSH-216ENST00000592445 MAP1LC3AQ9H492 121 aa11.24□□□□□ -0.61
PRKCSH-216ENST00000592445 GEMIN7Q9H840 131 aaKnown RBP11.24□□□□□ -0.61
PRKCSH-216ENST00000592445 IGKV2-28A0A075B6P5 120 aa11.22□□□□□ -0.61
PRKCSH-216ENST00000592445 IGKV2D-28P01615 120 aa11.22□□□□□ -0.61
PRKCSH-216ENST00000592445 IGLV5-37A0A075B6J1 123 aa11.21□□□□□ -0.61
PRKCSH-216ENST00000592445 NPSP0C0P6 89 aa11.21□□□□□ -0.61
PRKCSH-216ENST00000592445 PRLHP81277 87 aa11.21□□□□□ -0.61
PRKCSH-216ENST00000592445 IGIPA6NJ69 53 aa11.2□□□□□ -0.62
PRKCSH-216ENST00000592445 PRSS47A8MTI9 375 aa11.2□□□□□ -0.62
PRKCSH-216ENST00000592445 RAB5BP61020 215 aa11.2□□□□□ -0.62
PRKCSH-216ENST00000592445 Q8N8P6 123 aa11.2□□□□□ -0.62
PRKCSH-216ENST00000592445 LAMTOR2Q9Y2Q5 125 aa11.2□□□□□ -0.62
PRKCSH-216ENST00000592445 ORMDL2Q53FV1 153 aa11.19□□□□□ -0.62
PRKCSH-216ENST00000592445 PAPPA-AS1Q5QFB9 102 aa11.19□□□□□ -0.62
PRKCSH-216ENST00000592445 FAM19A1Q7Z5A9 133 aa11.19□□□□□ -0.62
PRKCSH-216ENST00000592445 SCO1O75880 301 aa11.18□□□□□ -0.62
PRKCSH-216ENST00000592445 ASB16-AS1Q495Z4 193 aa11.18□□□□□ -0.62
PRKCSH-216ENST00000592445 SPAG11AQ6PDA7 123 aa11.18□□□□□ -0.62
PRKCSH-216ENST00000592445 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
PRKCSH-216ENST00000592445 ATP5L2Q7Z4Y8 100 aa11.18□□□□□ -0.62
PRKCSH-216ENST00000592445 C3orf22Q8N5N4 141 aa11.18□□□□□ -0.62
PRKCSH-216ENST00000592445 C9JQL5 133 aa11.17□□□□□ -0.62
PRKCSH-216ENST00000592445 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
PRKCSH-216ENST00000592445 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
PRKCSH-216ENST00000592445 SRSF3P84103 164 aaKnown RBP11.14□□□□□ -0.63
PRKCSH-216ENST00000592445 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
PRKCSH-216ENST00000592445 PDZD11Q5EBL8 140 aa11.14□□□□□ -0.63
PRKCSH-216ENST00000592445 PLEKHB2Q96CS7 222 aa11.14□□□□□ -0.63
PRKCSH-216ENST00000592445 TMEM126AQ9H061 195 aa11.14□□□□□ -0.63
PRKCSH-216ENST00000592445 TMEM238C9JI98 176 aa11.13□□□□□ -0.63
PRKCSH-216ENST00000592445 K7EMI3 77 aa11.13□□□□□ -0.63
PRKCSH-216ENST00000592445 KRTAP13-3Q3SY46 172 aa11.13□□□□□ -0.63
PRKCSH-216ENST00000592445 SEC61BP60468 96 aaKnown RBP11.12□□□□□ -0.63
PRKCSH-216ENST00000592445 CBLN2Q8IUK8 224 aa11.12□□□□□ -0.63
PRKCSH-216ENST00000592445 KRTAP4-1Q9BYQ7 146 aa11.12□□□□□ -0.63
PRKCSH-216ENST00000592445 PEA15Q15121 130 aa11.11□□□□□ -0.63
PRKCSH-216ENST00000592445 AKAP14Q86UN6 197 aa11.11□□□□□ -0.63
PRKCSH-216ENST00000592445 TIMM17AQ99595 171 aa11.11□□□□□ -0.63
PRKCSH-216ENST00000592445 G0S2P27469 103 aa11.1□□□□□ -0.63
PRKCSH-216ENST00000592445 HIGD2AQ9BW72 106 aa11.09□□□□□ -0.63
PRKCSH-216ENST00000592445 GNB1LQ9BYB4 327 aa11.09□□□□□ -0.63
PRKCSH-216ENST00000592445 NXT2Q9NPJ8 142 aaKnown RBP11.09□□□□□ -0.63
PRKCSH-216ENST00000592445 TINCRA0A1B0GVN0 87 aa11.08□□□□□ -0.64
PRKCSH-216ENST00000592445 M0R378 163 aa11.08□□□□□ -0.64
PRKCSH-216ENST00000592445 ATP5LO75964 103 aa11.08□□□□□ -0.64
PRKCSH-216ENST00000592445 SPINK8P0C7L1 97 aa11.08□□□□□ -0.64
PRKCSH-216ENST00000592445 PFN2P35080 140 aa11.08□□□□□ -0.64
PRKCSH-216ENST00000592445 TOMM6Q96B49 74 aa11.07□□□□□ -0.64
PRKCSH-216ENST00000592445 VPREB1P12018 145 aa11.06□□□□□ -0.64
PRKCSH-216ENST00000592445 SCGB3A1Q96QR1 104 aa11.06□□□□□ -0.64
PRKCSH-216ENST00000592445 IGLV5-45A0A087WSX0 123 aa11.05□□□□□ -0.64
PRKCSH-216ENST00000592445 RPL24P83731 157 aaKnown RBP11.05□□□□□ -0.64
PRKCSH-216ENST00000592445 ERASQ7Z444 233 aa11.05□□□□□ -0.64
PRKCSH-216ENST00000592445 DAND5Q8N907 189 aa11.04□□□□□ -0.64
PRKCSH-216ENST00000592445 Q8NBF4 154 aa11.04□□□□□ -0.64
PRKCSH-216ENST00000592445 SPRR4Q96PI1 79 aa11.04□□□□□ -0.64
PRKCSH-216ENST00000592445 SND1-IT1Q9HBX3 110 aa11.03□□□□□ -0.64
PRKCSH-216ENST00000592445 ADCYAP1P18509 176 aa11.02□□□□□ -0.65
PRKCSH-216ENST00000592445 RAB14P61106 215 aa11.02□□□□□ -0.65
PRKCSH-216ENST00000592445 ZNF706Q9Y5V0 76 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-216ENST00000592445 H3BRM9 83 aa11□□□□□ -0.65
PRKCSH-216ENST00000592445 MRPL18Q9H0U6 180 aaKnown RBP11□□□□□ -0.65
PRKCSH-216ENST00000592445 CST9LQ9H4G1 147 aa11□□□□□ -0.65
PRKCSH-216ENST00000592445 NDUFA12Q9UI09 145 aa11□□□□□ -0.65
PRKCSH-216ENST00000592445 A0A1B0GVG6 124 aa10.99□□□□□ -0.65
PRKCSH-216ENST00000592445 SPINK1P00995 79 aa10.99□□□□□ -0.65
PRKCSH-216ENST00000592445 hCG_2014768A0A024R1R8 64 aa10.98□□□□□ -0.65
PRKCSH-216ENST00000592445 ERG28Q9UKR5 140 aa10.98□□□□□ -0.65
PRKCSH-216ENST00000592445 Q8NDZ9 215 aa10.96□□□□□ -0.65
PRKCSH-216ENST00000592445 COX17Q14061 63 aa10.95□□□□□ -0.66
PRKCSH-216ENST00000592445 PMVKQ15126 192 aa10.95□□□□□ -0.66
PRKCSH-216ENST00000592445 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms