RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 UBE2V1Q13404 147 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 WFDC10BQ8IUB3 73 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 MUSTN1Q8IVN3 82 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 C15orf53Q8NAA6 179 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 CHCHD10Q8WYQ3 142 aaPredicted RBP6.36□□□□□ -1.39
VPS25-205ENST00000590339 LYSTQ99698 3801 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 ALMS1Q8TCU4 4167 aa6.36□□□□□ -1.39
VPS25-205ENST00000590339 CFC1BP0CG36 223 aa6.35□□□□□ -1.39
VPS25-205ENST00000590339 CFC1P0CG37 223 aa6.35□□□□□ -1.39
VPS25-205ENST00000590339 FOXI1Q12951 378 aa6.35□□□□□ -1.39
VPS25-205ENST00000590339 VAMP3Q15836 100 aa6.35□□□□□ -1.39
VPS25-205ENST00000590339 ESRGQ1W209 222 aa6.35□□□□□ -1.39
VPS25-205ENST00000590339 SFTA2Q6UW10 78 aa6.35□□□□□ -1.39
VPS25-205ENST00000590339 Q8IZM0 81 aa6.35□□□□□ -1.39
VPS25-205ENST00000590339 NAA38Q9BRA0 125 aaKnown RBP6.35□□□□□ -1.39
VPS25-205ENST00000590339 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.34□□□□□ -1.39
VPS25-205ENST00000590339 K7EP34 96 aa6.34□□□□□ -1.39
VPS25-205ENST00000590339 COX7A2LO14548 114 aa6.34□□□□□ -1.39
VPS25-205ENST00000590339 TSPAN13O95857 204 aa6.34□□□□□ -1.39
VPS25-205ENST00000590339 ENHOQ6UWT2 76 aa6.34□□□□□ -1.39
VPS25-205ENST00000590339 KLK12Q9UKR0 248 aa6.34□□□□□ -1.39
VPS25-205ENST00000590339 BIRC6Q9NR09 4857 aa6.34□□□□□ -1.39
VPS25-205ENST00000590339 APOMO95445 188 aa6.33□□□□□ -1.4
VPS25-205ENST00000590339 CIRBPQ14011 172 aaKnown RBP6.33□□□□□ -1.4
VPS25-205ENST00000590339 KIAA0087Q14695 138 aa6.33□□□□□ -1.4
VPS25-205ENST00000590339 LINC01556Q5JQF7 62 aa6.33□□□□□ -1.4
VPS25-205ENST00000590339 SOSTDC1Q6X4U4 206 aa6.33□□□□□ -1.4
VPS25-205ENST00000590339 LINC00308Q8TCZ7 52 aa6.33□□□□□ -1.4
VPS25-205ENST00000590339 PGPEP1Q9NXJ5 209 aa6.33□□□□□ -1.4
VPS25-205ENST00000590339 TOMM7Q9P0U1 55 aa6.33□□□□□ -1.4
VPS25-205ENST00000590339 IGLV10-54A0A075B6I4 117 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 TRAV8-4A0A0B4J246 113 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 IBA57-AS1B1ANH7 110 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 IGHV3-33P01772 117 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 FABP2P12104 132 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 CXCL5P42830 114 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 MEIG1Q5JSS6 88 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 KRTAP26-1Q6PEX3 210 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 PRO1854Q9UHT4 67 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 SPCS1Q9Y6A9 102 aa6.32□□□□□ -1.4
VPS25-205ENST00000590339 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
VPS25-205ENST00000590339 M0R2N4 97 aa6.31□□□□□ -1.4
VPS25-205ENST00000590339 CRPP02741 224 aa6.31□□□□□ -1.4
VPS25-205ENST00000590339 DNAH10OSP0CZ25 163 aa6.31□□□□□ -1.4
VPS25-205ENST00000590339 GTF2H5Q6ZYL4 71 aa6.31□□□□□ -1.4
VPS25-205ENST00000590339 UBE2DNLQ8IWF7 75 aa6.31□□□□□ -1.4
VPS25-205ENST00000590339 DAND5Q8N907 189 aa6.31□□□□□ -1.4
VPS25-205ENST00000590339 COPS9Q8WXC6 57 aa6.31□□□□□ -1.4
VPS25-205ENST00000590339 GAGE10A6NGK3 116 aa6.3□□□□□ -1.4
VPS25-205ENST00000590339 PRSS2P07478 247 aa6.29□□□□□ -1.4
VPS25-205ENST00000590339 NPC2P61916 151 aa6.29□□□□□ -1.4
VPS25-205ENST00000590339 C6orf226Q5I0X4 101 aa6.29□□□□□ -1.4
VPS25-205ENST00000590339 UBE2WQ96B02 151 aa6.29□□□□□ -1.4
VPS25-205ENST00000590339 UPK3BQ9BT76 320 aa6.29□□□□□ -1.4
VPS25-205ENST00000590339 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
VPS25-205ENST00000590339 LINC00588Q9Y4M8 146 aa6.29□□□□□ -1.4
VPS25-205ENST00000590339 A0A0U1RRA0 63 aa6.28□□□□□ -1.4
VPS25-205ENST00000590339 MALP21145 153 aa6.28□□□□□ -1.4
VPS25-205ENST00000590339 SPAG11BQ08648 103 aa6.28□□□□□ -1.4
VPS25-205ENST00000590339 LYRM7Q5U5X0 104 aa6.28□□□□□ -1.4
VPS25-205ENST00000590339 CFAP161Q6P656 301 aa6.28□□□□□ -1.4
VPS25-205ENST00000590339 MIR7-3HGQ8N6C7 128 aa6.28□□□□□ -1.4
VPS25-205ENST00000590339 LOC107984156A0A0G2JMH3 177 aa6.27□□□□□ -1.41
VPS25-205ENST00000590339 C2orf82Q6UX34 121 aa6.27□□□□□ -1.41
VPS25-205ENST00000590339 ARL17AQ8IVW1 177 aa6.27□□□□□ -1.41
VPS25-205ENST00000590339 CCL18P55774 89 aa6.26□□□□□ -1.41
VPS25-205ENST00000590339 KMT2AQ03164 3969 aa6.26□□□□□ -1.41
VPS25-205ENST00000590339 VPS13DQ5THJ4 4388 aa6.25□□□□□ -1.41
VPS25-205ENST00000590339 GVQW2A0A096LPI5 108 aaPredicted RBP6.25□□□□□ -1.41
VPS25-205ENST00000590339 TRBV30A0A0K0K1B3 111 aa6.25□□□□□ -1.41
VPS25-205ENST00000590339 RPL13AP40429 203 aaKnown RBP6.25□□□□□ -1.41
VPS25-205ENST00000590339 LINC00158P58513 81 aa6.25□□□□□ -1.41
VPS25-205ENST00000590339 CKS1BP61024 79 aa6.25□□□□□ -1.41
VPS25-205ENST00000590339 COX17Q14061 63 aa6.25□□□□□ -1.41
VPS25-205ENST00000590339 C15orf56Q8N910 161 aa6.25□□□□□ -1.41
VPS25-205ENST00000590339 NTN5Q8WTR8 489 aaPredicted RBP6.25□□□□□ -1.41
VPS25-205ENST00000590339 PFN2P35080 140 aa6.24□□□□□ -1.41
VPS25-205ENST00000590339 C10orf25Q5T742 122 aa6.24□□□□□ -1.41
VPS25-205ENST00000590339 C1orf43Q9BWL3 253 aa6.24□□□□□ -1.41
VPS25-205ENST00000590339 SND1-IT1Q9HBX3 110 aa6.24□□□□□ -1.41
VPS25-205ENST00000590339 PRO0461Q9UI25 63 aa6.24□□□□□ -1.41
VPS25-205ENST00000590339 TRBV20-1A0A075B6N2 111 aa6.23□□□□□ -1.41
VPS25-205ENST00000590339 IGKV2-28A0A075B6P5 120 aa6.23□□□□□ -1.41
VPS25-205ENST00000590339 TRIAP1O43715 76 aa6.23□□□□□ -1.41
VPS25-205ENST00000590339 TCL1BO95988 128 aa6.23□□□□□ -1.41
VPS25-205ENST00000590339 IGKV2D-28P01615 120 aa6.23□□□□□ -1.41
VPS25-205ENST00000590339 C6orf223Q8N319 242 aa6.23□□□□□ -1.41
VPS25-205ENST00000590339 F8WDY8 70 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 H3BMG7 143 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 H7C2G1 150 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 RTL8CO15255 209 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 Q1RN00 199 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 UNQ6190/PRO20217Q6UXQ8 127 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 LINC00336Q6ZUF6 198 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 C2orf48Q96LS8 159 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 DNAH10Q8IVF4 4471 aa6.22□□□□□ -1.41
VPS25-205ENST00000590339 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
VPS25-205ENST00000590339 TRAV13-2A0A0B4J235 113 aa6.21□□□□□ -1.42
VPS25-205ENST00000590339 NDUFC2O95298 119 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms