RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 KMT2AQ03164 3969 aa11.57□□□□□ -0.56
CXXC1-212ENST00000589940 CXCL5P42830 114 aa11.56□□□□□ -0.56
CXXC1-212ENST00000589940 BATFQ16520 125 aa11.56□□□□□ -0.56
CXXC1-212ENST00000589940 COL5A1-AS1Q5SY13 56 aa11.56□□□□□ -0.56
CXXC1-212ENST00000589940 CKS1BP61024 79 aa11.56□□□□□ -0.56
CXXC1-212ENST00000589940 LINC00476Q8WZB0 136 aa11.56□□□□□ -0.56
CXXC1-212ENST00000589940 DNAH6Q9C0G6 4158 aa11.56□□□□□ -0.56
CXXC1-212ENST00000589940 LY6G6CO95867 125 aa11.55□□□□□ -0.56
CXXC1-212ENST00000589940 C2orf82Q6UX34 121 aa11.55□□□□□ -0.56
CXXC1-212ENST00000589940 HSD52Q0P140 79 aa11.54□□□□□ -0.56
CXXC1-212ENST00000589940 TMEM238C9JI98 176 aa11.54□□□□□ -0.56
CXXC1-212ENST00000589940 SPANXB1Q9NS25 103 aaPredicted RBP11.54□□□□□ -0.56
CXXC1-212ENST00000589940 ZNF561-AS1K7EIQ3 104 aa11.53□□□□□ -0.56
CXXC1-212ENST00000589940 M0R2N4 97 aa11.53□□□□□ -0.56
CXXC1-212ENST00000589940 TIMM17BO60830 172 aa11.53□□□□□ -0.56
CXXC1-212ENST00000589940 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
CXXC1-212ENST00000589940 C6orf223Q8N319 242 aa11.53□□□□□ -0.56
CXXC1-212ENST00000589940 LINC00526Q96FQ7 95 aa11.53□□□□□ -0.56
CXXC1-212ENST00000589940 LITAFQ99732 161 aa11.53□□□□□ -0.56
CXXC1-212ENST00000589940 GVQW2A0A096LPI5 108 aaPredicted RBP11.52□□□□□ -0.56
CXXC1-212ENST00000589940 HIST1H4GQ99525 98 aa11.52□□□□□ -0.56
CXXC1-212ENST00000589940 CIRBPQ14011 172 aaKnown RBP11.52□□□□□ -0.57
CXXC1-212ENST00000589940 TAL2Q16559 108 aa11.52□□□□□ -0.57
CXXC1-212ENST00000589940 MEIG1Q5JSS6 88 aa11.52□□□□□ -0.57
CXXC1-212ENST00000589940 NTN5Q8WTR8 489 aaPredicted RBP11.52□□□□□ -0.57
CXXC1-212ENST00000589940 USP17L23D6RBM5 183 aa11.51□□□□□ -0.57
CXXC1-212ENST00000589940 PSCAO43653 123 aa11.51□□□□□ -0.57
CXXC1-212ENST00000589940 SRSF9Q13242 221 aaKnown RBP eCLIP11.51□□□□□ -0.57
CXXC1-212ENST00000589940 Q6ZR54 194 aa11.51□□□□□ -0.57
CXXC1-212ENST00000589940 HINT1P49773 126 aaPredicted RBP11.5□□□□□ -0.57
CXXC1-212ENST00000589940 ADAMTSL4-AS1Q5T5F5 129 aa11.5□□□□□ -0.57
CXXC1-212ENST00000589940 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
CXXC1-212ENST00000589940 UNQ6190/PRO20217Q6UXQ8 127 aa11.49□□□□□ -0.57
CXXC1-212ENST00000589940 DNAH2Q9P225 4427 aa11.49□□□□□ -0.57
CXXC1-212ENST00000589940 SMIM13P0DJ93 91 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 BVES-AS1Q5T3Y7 98 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 C10orf25Q5T742 122 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 SPANXDQ9BXN6 97 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 SPANXCQ9NY87 97 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 ERG28Q9UKR5 140 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 GCSHP23434 173 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 Q6ZRN7 208 aaPredicted RBP11.48□□□□□ -0.57
CXXC1-212ENST00000589940 Q6ZVH6 145 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 CEND1Q8N111 149 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 CAMK2N2Q96S95 79 aa11.48□□□□□ -0.57
CXXC1-212ENST00000589940 A0A0U1RRA0 63 aa11.47□□□□□ -0.57
CXXC1-212ENST00000589940 F8WDY8 70 aa11.47□□□□□ -0.57
CXXC1-212ENST00000589940 PTTG1IPP53801 180 aa11.47□□□□□ -0.57
CXXC1-212ENST00000589940 LECT2O14960 151 aa11.47□□□□□ -0.57
CXXC1-212ENST00000589940 DAND5Q8N907 189 aa11.46□□□□□ -0.57
CXXC1-212ENST00000589940 PFN2P35080 140 aa11.45□□□□□ -0.58
CXXC1-212ENST00000589940 LINC00158P58513 81 aa11.45□□□□□ -0.58
CXXC1-212ENST00000589940 COX17Q14061 63 aa11.44□□□□□ -0.58
CXXC1-212ENST00000589940 WFDC2Q14508 124 aa11.44□□□□□ -0.58
CXXC1-212ENST00000589940 C6orf48Q9UBA6 75 aa11.44□□□□□ -0.58
CXXC1-212ENST00000589940 TRBV30A0A0K0K1B3 111 aa11.44□□□□□ -0.58
CXXC1-212ENST00000589940 FXYD2P54710 66 aa11.44□□□□□ -0.58
CXXC1-212ENST00000589940 C9orf116Q5BN46 136 aaPredicted RBP11.44□□□□□ -0.58
CXXC1-212ENST00000589940 Q6ZRU5 148 aa11.44□□□□□ -0.58
CXXC1-212ENST00000589940 MUSTN1Q8IVN3 82 aa11.43□□□□□ -0.58
CXXC1-212ENST00000589940 MIR7-3HGQ8N6C7 128 aa11.43□□□□□ -0.58
CXXC1-212ENST00000589940 IFITM1P13164 125 aa11.43□□□□□ -0.58
CXXC1-212ENST00000589940 SYCNQ0VAF6 134 aa11.43□□□□□ -0.58
CXXC1-212ENST00000589940 UBE2V1Q13404 147 aa11.42□□□□□ -0.58
CXXC1-212ENST00000589940 LRCOL1A6NCL2 159 aa11.41□□□□□ -0.58
CXXC1-212ENST00000589940 NPC2P61916 151 aa11.41□□□□□ -0.58
CXXC1-212ENST00000589940 C14orf177Q52M58 125 aa11.41□□□□□ -0.58
CXXC1-212ENST00000589940 C1orf134Q5TEV5 83 aa11.41□□□□□ -0.58
CXXC1-212ENST00000589940 LINC00308Q8TCZ7 52 aa11.41□□□□□ -0.58
CXXC1-212ENST00000589940 SACSQ9NZJ4 4579 aa11.4□□□□□ -0.58
CXXC1-212ENST00000589940 SLPIP03973 132 aa11.4□□□□□ -0.58
CXXC1-212ENST00000589940 RPL24P83731 157 aaKnown RBP11.4□□□□□ -0.58
CXXC1-212ENST00000589940 COPS9Q8WXC6 57 aa11.4□□□□□ -0.58
CXXC1-212ENST00000589940 CARD19Q96LW7 228 aa11.4□□□□□ -0.58
CXXC1-212ENST00000589940 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.59
CXXC1-212ENST00000589940 TMEM238LA0A1B0GVL6 79 aa11.39□□□□□ -0.59
CXXC1-212ENST00000589940 A6NJY4 79 aa11.39□□□□□ -0.59
CXXC1-212ENST00000589940 EIF4EBP3O60516 100 aaPredicted RBP11.39□□□□□ -0.59
CXXC1-212ENST00000589940 A6NDN8 102 aa11.38□□□□□ -0.59
CXXC1-212ENST00000589940 SOSTDC1Q6X4U4 206 aa11.38□□□□□ -0.59
CXXC1-212ENST00000589940 PPDPFQ9H3Y8 114 aa11.38□□□□□ -0.59
CXXC1-212ENST00000589940 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
CXXC1-212ENST00000589940 A4D1N5 150 aa11.37□□□□□ -0.59
CXXC1-212ENST00000589940 NHP2Q9NX24 153 aaKnown RBP11.36□□□□□ -0.59
CXXC1-212ENST00000589940 DNAH17Q9UFH2 4485 aa11.36□□□□□ -0.59
CXXC1-212ENST00000589940 CNBPP62633 177 aaKnown RBP11.36□□□□□ -0.59
CXXC1-212ENST00000589940 FRAS1Q86XX4 4008 aa11.35□□□□□ -0.59
CXXC1-212ENST00000589940 NDUFC2-KCTD14E9PQ53 114 aa11.35□□□□□ -0.59
CXXC1-212ENST00000589940 SND1-IT1Q9HBX3 110 aa11.35□□□□□ -0.59
CXXC1-212ENST00000589940 A0A087WTM6 91 aa11.33□□□□□ -0.59
CXXC1-212ENST00000589940 LOC107984156A0A0G2JMH3 177 aa11.33□□□□□ -0.59
CXXC1-212ENST00000589940 ARL17AQ8IVW1 177 aa11.33□□□□□ -0.59
CXXC1-212ENST00000589940 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.33□□□□□ -0.6
CXXC1-212ENST00000589940 LCE6AA0A183 80 aa11.33□□□□□ -0.6
CXXC1-212ENST00000589940 A0A1B0GWB2 263 aa11.33□□□□□ -0.6
CXXC1-212ENST00000589940 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.32□□□□□ -0.6
CXXC1-212ENST00000589940 K7ERJ3 54 aa11.32□□□□□ -0.6
CXXC1-212ENST00000589940 Q8N814 137 aa11.32□□□□□ -0.6
CXXC1-212ENST00000589940 TLX1NBP0CAT3 122 aa11.32□□□□□ -0.6
CXXC1-212ENST00000589940 CFC1BP0CG36 223 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms