RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 SPANXCQ9NY87 97 aa6.72□□□□□ -1.33
RANBP3-216ENST00000589353 ZNF561-AS1K7EIQ3 104 aa6.71□□□□□ -1.34
RANBP3-216ENST00000589353 HUWE1Q7Z6Z7 4374 aaKnown RBP6.71□□□□□ -1.34
RANBP3-216ENST00000589353 KRTAP26-1Q6PEX3 210 aa6.7□□□□□ -1.34
RANBP3-216ENST00000589353 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.69□□□□□ -1.34
RANBP3-216ENST00000589353 SMIM13P0DJ93 91 aa6.69□□□□□ -1.34
RANBP3-216ENST00000589353 LINC00158P58513 81 aa6.69□□□□□ -1.34
RANBP3-216ENST00000589353 COX17Q14061 63 aa6.69□□□□□ -1.34
RANBP3-216ENST00000589353 KIAA0087Q14695 138 aa6.69□□□□□ -1.34
RANBP3-216ENST00000589353 LCE2DQ5TA82 110 aaPredicted RBP6.69□□□□□ -1.34
RANBP3-216ENST00000589353 PPDPFQ9H3Y8 114 aa6.69□□□□□ -1.34
RANBP3-216ENST00000589353 MEGF8Q7Z7M0 2845 aa6.68□□□□□ -1.34
RANBP3-216ENST00000589353 COL7A1Q02388 2944 aa6.68□□□□□ -1.34
RANBP3-216ENST00000589353 FXYD2P54710 66 aa6.68□□□□□ -1.34
RANBP3-216ENST00000589353 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
RANBP3-216ENST00000589353 C2orf48Q96LS8 159 aa6.68□□□□□ -1.34
RANBP3-216ENST00000589353 LITAFQ99732 161 aa6.68□□□□□ -1.34
RANBP3-216ENST00000589353 ERG28Q9UKR5 140 aa6.68□□□□□ -1.34
RANBP3-216ENST00000589353 C3orf84H3BNL1 204 aa6.67□□□□□ -1.34
RANBP3-216ENST00000589353 PSCAO43653 123 aa6.67□□□□□ -1.34
RANBP3-216ENST00000589353 NTN5Q8WTR8 489 aaPredicted RBP6.67□□□□□ -1.34
RANBP3-216ENST00000589353 CAMK2N2Q96S95 79 aa6.67□□□□□ -1.34
RANBP3-216ENST00000589353 NHP2Q9NX24 153 aaKnown RBP6.67□□□□□ -1.34
RANBP3-216ENST00000589353 DNAH9Q9NYC9 4486 aa6.67□□□□□ -1.34
RANBP3-216ENST00000589353 GVQW2A0A096LPI5 108 aaPredicted RBP6.66□□□□□ -1.34
RANBP3-216ENST00000589353 TRBV30A0A0K0K1B3 111 aa6.66□□□□□ -1.34
RANBP3-216ENST00000589353 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
RANBP3-216ENST00000589353 NBDYA0A0U1RRE5 68 aa6.66□□□□□ -1.34
RANBP3-216ENST00000589353 PFN2P35080 140 aa6.66□□□□□ -1.34
RANBP3-216ENST00000589353 C14orf177Q52M58 125 aa6.66□□□□□ -1.34
RANBP3-216ENST00000589353 ADAMTSL4-AS1Q5T5F5 129 aa6.66□□□□□ -1.34
RANBP3-216ENST00000589353 C2orf82Q6UX34 121 aa6.66□□□□□ -1.34
RANBP3-216ENST00000589353 MIR7-3HGQ8N6C7 128 aa6.65□□□□□ -1.34
RANBP3-216ENST00000589353 LINC00308Q8TCZ7 52 aa6.65□□□□□ -1.34
RANBP3-216ENST00000589353 RAB37Q96AX2 223 aa6.65□□□□□ -1.34
RANBP3-216ENST00000589353 A0A1B0GWB2 263 aa6.64□□□□□ -1.35
RANBP3-216ENST00000589353 A4D1N5 150 aa6.64□□□□□ -1.35
RANBP3-216ENST00000589353 HIGD2BQ4VC39 106 aa6.64□□□□□ -1.35
RANBP3-216ENST00000589353 UNQ6190/PRO20217Q6UXQ8 127 aa6.64□□□□□ -1.35
RANBP3-216ENST00000589353 C15orf56Q8N910 161 aa6.64□□□□□ -1.35
RANBP3-216ENST00000589353 A0A0B4J2C4 111 aa6.63□□□□□ -1.35
RANBP3-216ENST00000589353 USP17L23D6RBM5 183 aa6.63□□□□□ -1.35
RANBP3-216ENST00000589353 SYCNQ0VAF6 134 aa6.63□□□□□ -1.35
RANBP3-216ENST00000589353 RNF151Q2KHN1 245 aa6.63□□□□□ -1.35
RANBP3-216ENST00000589353 C6orf223Q8N319 242 aa6.63□□□□□ -1.35
RANBP3-216ENST00000589353 DAND5Q8N907 189 aa6.63□□□□□ -1.35
RANBP3-216ENST00000589353 C9orf118A6NHY6 69 aa6.62□□□□□ -1.35
RANBP3-216ENST00000589353 TAX1BP3O14907 124 aa6.62□□□□□ -1.35
RANBP3-216ENST00000589353 NPC2P61916 151 aa6.62□□□□□ -1.35
RANBP3-216ENST00000589353 CASC10Q5T4H9 136 aa6.62□□□□□ -1.35
RANBP3-216ENST00000589353 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
RANBP3-216ENST00000589353 LOC107984156A0A0G2JMH3 177 aa6.61□□□□□ -1.35
RANBP3-216ENST00000589353 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
RANBP3-216ENST00000589353 CFC1P0CG37 223 aa6.61□□□□□ -1.35
RANBP3-216ENST00000589353 ARL17AQ8IVW1 177 aa6.61□□□□□ -1.35
RANBP3-216ENST00000589353 LINC00526Q96FQ7 95 aa6.61□□□□□ -1.35
RANBP3-216ENST00000589353 CARD19Q96LW7 228 aa6.61□□□□□ -1.35
RANBP3-216ENST00000589353 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
RANBP3-216ENST00000589353 SND1-IT1Q9HBX3 110 aa6.61□□□□□ -1.35
RANBP3-216ENST00000589353 TRAV13-2A0A0B4J235 113 aa6.6□□□□□ -1.35
RANBP3-216ENST00000589353 LY6G6CO95867 125 aa6.6□□□□□ -1.35
RANBP3-216ENST00000589353 C10orf25Q5T742 122 aa6.6□□□□□ -1.35
RANBP3-216ENST00000589353 LYRM7Q5U5X0 104 aa6.6□□□□□ -1.35
RANBP3-216ENST00000589353 Q6ZRU5 148 aa6.6□□□□□ -1.35
RANBP3-216ENST00000589353 C6orf48Q9UBA6 75 aa6.6□□□□□ -1.35
RANBP3-216ENST00000589353 PKIGQ9Y2B9 76 aa6.6□□□□□ -1.35
RANBP3-216ENST00000589353 K7ERJ3 54 aa6.59□□□□□ -1.35
RANBP3-216ENST00000589353 C9orf116Q5BN46 136 aaPredicted RBP6.59□□□□□ -1.35
RANBP3-216ENST00000589353 PGPEP1Q9NXJ5 209 aa6.59□□□□□ -1.35
RANBP3-216ENST00000589353 A0A1B0GV90 55 aa6.58□□□□□ -1.36
RANBP3-216ENST00000589353 NDUFC2-KCTD14E9PQ53 114 aa6.58□□□□□ -1.36
RANBP3-216ENST00000589353 H3BUT2 72 aa6.58□□□□□ -1.36
RANBP3-216ENST00000589353 NDUFC2O95298 119 aa6.58□□□□□ -1.36
RANBP3-216ENST00000589353 FABP2P12104 132 aa6.58□□□□□ -1.36
RANBP3-216ENST00000589353 VAMP3Q15836 100 aa6.58□□□□□ -1.36
RANBP3-216ENST00000589353 Q1RN00 199 aa6.58□□□□□ -1.36
RANBP3-216ENST00000589353 SOSTDC1Q6X4U4 206 aa6.58□□□□□ -1.36
RANBP3-216ENST00000589353 M0R2N4 97 aa6.57□□□□□ -1.36
RANBP3-216ENST00000589353 COX6CP09669 75 aa6.57□□□□□ -1.36
RANBP3-216ENST00000589353 LINC00476Q8WZB0 136 aa6.57□□□□□ -1.36
RANBP3-216ENST00000589353 PRKDCP78527 4128 aaKnown RBP6.57□□□□□ -1.36
RANBP3-216ENST00000589353 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
RANBP3-216ENST00000589353 TLX1NBP0CAT3 122 aa6.56□□□□□ -1.36
RANBP3-216ENST00000589353 RPL13AP40429 203 aaKnown RBP6.56□□□□□ -1.36
RANBP3-216ENST00000589353 PSMB2P49721 201 aa6.56□□□□□ -1.36
RANBP3-216ENST00000589353 C1orf134Q5TEV5 83 aa6.56□□□□□ -1.36
RANBP3-216ENST00000589353 Q6ZR54 194 aa6.56□□□□□ -1.36
RANBP3-216ENST00000589353 GTF2H5Q6ZYL4 71 aa6.56□□□□□ -1.36
RANBP3-216ENST00000589353 LOC107984640A0A0U1RRK4 108 aa6.55□□□□□ -1.36
RANBP3-216ENST00000589353 LECT2O14960 151 aa6.55□□□□□ -1.36
RANBP3-216ENST00000589353 TSPAN13O95857 204 aa6.55□□□□□ -1.36
RANBP3-216ENST00000589353 SCGB1C2P0DMR2 95 aa6.55□□□□□ -1.36
RANBP3-216ENST00000589353 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
RANBP3-216ENST00000589353 CBY1Q9Y3M2 126 aa6.55□□□□□ -1.36
RANBP3-216ENST00000589353 GAGE10A6NGK3 116 aa6.54□□□□□ -1.36
RANBP3-216ENST00000589353 H7C2G1 150 aa6.54□□□□□ -1.36
RANBP3-216ENST00000589353 EIF4EBP3O60516 100 aaPredicted RBP6.54□□□□□ -1.36
RANBP3-216ENST00000589353 Q6ZRN7 208 aaPredicted RBP6.54□□□□□ -1.36
RANBP3-216ENST00000589353 OR13C6PQ8NH95 151 aa6.54□□□□□ -1.36
RANBP3-216ENST00000589353 TRBV10-2A0A0K0K1G8 114 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms