RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 FXYD6-FXYD2A0A087WZ82 144 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 TRAV26-2A0A0B4J265 109 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 IGKV3OR2-268A0A0C4DH90 116 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 MUC21A0A0G2JKD1 596 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 MUC21A0A140T8X8 626 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 F2Z2F3 143 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 SMIM6P0DI80 62 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 DDTP30046 118 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 KRTAP10-8P60410 259 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 SCGB1D4Q6XE38 83 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 FER1L6-AS1Q8NA97 138 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 SFT2D1Q8WV19 159 aa3.47□□□□□ -1.85
DNMT1-220ENST00000589351 IGHV6-1A0A0B4J1U7 121 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 A0A1B0GVG6 124 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 SMIM1B2RUZ4 78 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 UMAD1C9J7I0 102 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 H7C423 109 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 ZNF25P17030 456 aaPredicted RBP3.46□□□□□ -1.86
DNMT1-220ENST00000589351 KRTAP10-12P60413 245 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 HIGD2BQ4VC39 106 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 KCNRGQ8N5I3 272 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 TMEM101Q96IK0 257 aa3.46□□□□□ -1.86
DNMT1-220ENST00000589351 GVQW2A0A096LPI5 108 aaPredicted RBP3.45□□□□□ -1.86
DNMT1-220ENST00000589351 LOC389332A0A1B0GUA5 103 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 NCR2O95944 276 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 NTF3P20783 257 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 PSMB2P49721 201 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 TEX261Q6UWH6 196 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 ZNF664Q8N3J9 261 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 C15orf56Q8N910 161 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 MBD3L1Q8WWY6 194 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 HSPB8Q9UJY1 196 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 PYGO1Q9Y3Y4 419 aa3.45□□□□□ -1.86
DNMT1-220ENST00000589351 A0A096LNI7 61 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 IGHV1-58A0A0C4DH39 117 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 A0A1B0GX51 115 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 KRTAP4-16G5E9R7 235 aaPredicted RBP3.44□□□□□ -1.86
DNMT1-220ENST00000589351 APCSP02743 223 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 IGLC6P0CF74 106 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 RPL35P42766 123 aaKnown RBP3.44□□□□□ -1.86
DNMT1-220ENST00000589351 RPS28P62857 69 aaKnown RBP3.44□□□□□ -1.86
DNMT1-220ENST00000589351 EIF5AP63241 154 aaKnown RBP3.44□□□□□ -1.86
DNMT1-220ENST00000589351 SS18Q15532 418 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 BATFQ16520 125 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 Q5BKY6 102 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 LYZL1Q6UWQ5 148 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 OR5A1Q8NGJ0 315 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 FAM213BQ8TBF2 198 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 PLEKHB2Q96CS7 222 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 CARD19Q96LW7 228 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 GFRA4Q9GZZ7 299 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 PSORS1C2Q9UIG4 136 aa3.44□□□□□ -1.86
DNMT1-220ENST00000589351 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 LOC107984640A0A0U1RRK4 108 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 A0A1B0GV50 99 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.43□□□□□ -1.86
DNMT1-220ENST00000589351 MT-ND6P03923 174 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 XCL1P47992 114 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 GNG4P50150 75 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 SYCNQ0VAF6 134 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 PRR4Q16378 134 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 EIF5AL1Q6IS14 154 aaKnown RBP3.43□□□□□ -1.86
DNMT1-220ENST00000589351 FA2HQ7L5A8 372 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 ATP5L2Q7Z4Y8 100 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 TSKUQ8WUA8 353 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 TMEM126AQ9H061 195 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 MANBALQ9NQG1 85 aa3.43□□□□□ -1.86
DNMT1-220ENST00000589351 LINC00959A0A1B0GUT2 108 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 KANTRA0A1W2PQU2 76 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 TMEM250H0YL14 139 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 I3L3M4 83 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 J3KT08 172 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 CCL25O15444 150 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 MP68P56378 58 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 CCL20P78556 96 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 LRP2P98164 4655 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 ADAMTSL4-AS1Q5T5F5 129 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 C9orf62Q8N4C0 152 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 CYTL1Q9NRR1 136 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 DHRS4-AS1Q9P1J3 65 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 TNXBP22105 4242 aa3.42□□□□□ -1.86
DNMT1-220ENST00000589351 IGLV4-69A0A075B6H9 119 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.41□□□□□ -1.86
DNMT1-220ENST00000589351 IGKV2-29A2NJV5 120 aaPredicted RBP3.41□□□□□ -1.86
DNMT1-220ENST00000589351 C19orf71A6NCJ1 209 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 SDHAF1A6NFY7 115 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 C1orf196B1AJZ1 125 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 APOMO95445 188 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 LINC01547P58512 204 aaPredicted RBP3.41□□□□□ -1.86
DNMT1-220ENST00000589351 ZNF345Q14585 488 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 C1orf137Q5JT78 98 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 ANKRD29Q8N6D5 301 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 DIRC1Q969H9 104 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 MED9Q9NWA0 146 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 GNG13Q9P2W3 67 aa3.41□□□□□ -1.86
DNMT1-220ENST00000589351 TRAV1-1A0A0B4J248 108 aa3.4□□□□□ -1.87
DNMT1-220ENST00000589351 COX7A2LO14548 114 aa3.4□□□□□ -1.87
DNMT1-220ENST00000589351 RPL23P62829 140 aaKnown RBP3.4□□□□□ -1.87
DNMT1-220ENST00000589351 HRCT1Q6UXD1 115 aa3.4□□□□□ -1.87
DNMT1-220ENST00000589351 FAM104AQ969W3 186 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms