RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 CKS1BP61024 79 aa12.04□□□□□ -0.48
DNMT1-215ENST00000588913 MIAQ16674 131 aa12.04□□□□□ -0.48
DNMT1-215ENST00000588913 SFTA2Q6UW10 78 aa12.04□□□□□ -0.48
DNMT1-215ENST00000588913 ANKRD29Q8N6D5 301 aa12.04□□□□□ -0.48
DNMT1-215ENST00000588913 NDUFA12Q9UI09 145 aa12.04□□□□□ -0.48
DNMT1-215ENST00000588913 UBE2D4Q9Y2X8 147 aa12.04□□□□□ -0.48
DNMT1-215ENST00000588913 GEMIN7Q9H840 131 aaKnown RBP12.03□□□□□ -0.48
DNMT1-215ENST00000588913 C9JAW5 83 aa12.02□□□□□ -0.48
DNMT1-215ENST00000588913 RPL13AP40429 203 aaKnown RBP12.02□□□□□ -0.48
DNMT1-215ENST00000588913 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.48
DNMT1-215ENST00000588913 LITAFQ99732 161 aa12.02□□□□□ -0.48
DNMT1-215ENST00000588913 CHCHD7Q9BUK0 85 aa12.02□□□□□ -0.48
DNMT1-215ENST00000588913 ICOSQ9Y6W8 199 aa12.02□□□□□ -0.48
DNMT1-215ENST00000588913 TRBV10-2A0A0K0K1G8 114 aa12.02□□□□□ -0.49
DNMT1-215ENST00000588913 LINC01620Q4KN68 170 aa12.02□□□□□ -0.49
DNMT1-215ENST00000588913 Q6ZR54 194 aa12.02□□□□□ -0.49
DNMT1-215ENST00000588913 DEFB104AQ8WTQ1 72 aa12.02□□□□□ -0.49
DNMT1-215ENST00000588913 IGLV5-45A0A087WSX0 123 aa12.01□□□□□ -0.49
DNMT1-215ENST00000588913 KRTAP1-5Q9BYS1 174 aa12.01□□□□□ -0.49
DNMT1-215ENST00000588913 H3BT86 120 aa12□□□□□ -0.49
DNMT1-215ENST00000588913 CCL18P55774 89 aa12□□□□□ -0.49
DNMT1-215ENST00000588913 IGHV3-64A0A075B6Q5 118 aa12□□□□□ -0.49
DNMT1-215ENST00000588913 PRSS2P07478 247 aa12□□□□□ -0.49
DNMT1-215ENST00000588913 LYPD5Q6UWN5 251 aa12□□□□□ -0.49
DNMT1-215ENST00000588913 FAM104AQ969W3 186 aa12□□□□□ -0.49
DNMT1-215ENST00000588913 HECTD4Q9Y4D8 3996 aa11.99□□□□□ -0.49
DNMT1-215ENST00000588913 PKD1P98161 4303 aa11.99□□□□□ -0.49
DNMT1-215ENST00000588913 HERVK_113P63121 156 aa11.99□□□□□ -0.49
DNMT1-215ENST00000588913 MRPL23Q16540 153 aaKnown RBP11.99□□□□□ -0.49
DNMT1-215ENST00000588913 FAM19A3Q7Z5A8 133 aa11.99□□□□□ -0.49
DNMT1-215ENST00000588913 PPDPFQ9H3Y8 114 aa11.99□□□□□ -0.49
DNMT1-215ENST00000588913 DNAH11Q96DT5 4516 aa11.99□□□□□ -0.49
DNMT1-215ENST00000588913 TRBV6-4A0A1B0GX49 114 aa11.98□□□□□ -0.49
DNMT1-215ENST00000588913 NDUFA1O15239 70 aa11.98□□□□□ -0.49
DNMT1-215ENST00000588913 CSDC2Q9Y534 153 aaKnown RBP11.98□□□□□ -0.49
DNMT1-215ENST00000588913 TRBV10-1A0A0K0K1A3 114 aa11.97□□□□□ -0.49
DNMT1-215ENST00000588913 EIF4EBP3O60516 100 aaPredicted RBP11.97□□□□□ -0.49
DNMT1-215ENST00000588913 DGAT2L7PQ6IED9 249 aa11.97□□□□□ -0.49
DNMT1-215ENST00000588913 LINC00694P0DN24 101 aa11.97□□□□□ -0.49
DNMT1-215ENST00000588913 UPK3BQ9BT76 320 aa11.97□□□□□ -0.49
DNMT1-215ENST00000588913 XGP55808 180 aa11.96□□□□□ -0.49
DNMT1-215ENST00000588913 Q9H8V8 135 aa11.96□□□□□ -0.49
DNMT1-215ENST00000588913 H7C2G1 150 aa11.95□□□□□ -0.5
DNMT1-215ENST00000588913 RTL8CO15255 209 aa11.95□□□□□ -0.5
DNMT1-215ENST00000588913 TRIAP1O43715 76 aa11.95□□□□□ -0.5
DNMT1-215ENST00000588913 MT-ATP8P03928 68 aa11.95□□□□□ -0.5
DNMT1-215ENST00000588913 TRAV8-3A0A0A6YYJ7 113 aa11.95□□□□□ -0.5
DNMT1-215ENST00000588913 NBDYA0A0U1RRE5 68 aa11.95□□□□□ -0.5
DNMT1-215ENST00000588913 WFDC10BQ8IUB3 73 aa11.95□□□□□ -0.5
DNMT1-215ENST00000588913 GAGE12JA6NER3 117 aa11.94□□□□□ -0.5
DNMT1-215ENST00000588913 GAGE4Q13068 117 aa11.94□□□□□ -0.5
DNMT1-215ENST00000588913 GAGE5Q13069 117 aa11.94□□□□□ -0.5
DNMT1-215ENST00000588913 DAZ4Q86SG3 579 aaKnown RBP11.94□□□□□ -0.5
DNMT1-215ENST00000588913 UBE2WQ96B02 151 aa11.94□□□□□ -0.5
DNMT1-215ENST00000588913 DAZ3Q9NR90 486 aaKnown RBP11.94□□□□□ -0.5
DNMT1-215ENST00000588913 Q6Q795 121 aa11.93□□□□□ -0.5
DNMT1-215ENST00000588913 FAM240AA0A1B0GVK7 77 aa11.92□□□□□ -0.5
DNMT1-215ENST00000588913 SNCGO76070 127 aa11.92□□□□□ -0.5
DNMT1-215ENST00000588913 C2orf82Q6UX34 121 aa11.92□□□□□ -0.5
DNMT1-215ENST00000588913 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.92□□□□□ -0.5
DNMT1-215ENST00000588913 TRAV8-4A0A0B4J246 113 aa11.92□□□□□ -0.5
DNMT1-215ENST00000588913 IGLV5-39A0A0G2JS06 123 aa11.92□□□□□ -0.5
DNMT1-215ENST00000588913 IGKV2-29A2NJV5 120 aaPredicted RBP11.92□□□□□ -0.5
DNMT1-215ENST00000588913 RPL36AP83881 106 aaKnown RBP11.92□□□□□ -0.5
DNMT1-215ENST00000588913 ADAMTSL4-AS1Q5T5F5 129 aa11.92□□□□□ -0.5
DNMT1-215ENST00000588913 NTN5Q8WTR8 489 aaPredicted RBP11.92□□□□□ -0.5
DNMT1-215ENST00000588913 RPL36ALQ969Q0 106 aaKnown RBP11.92□□□□□ -0.5
DNMT1-215ENST00000588913 LST1O00453 97 aa11.91□□□□□ -0.5
DNMT1-215ENST00000588913 HERV-K104P63124 156 aa11.91□□□□□ -0.5
DNMT1-215ENST00000588913 BIRC6Q9NR09 4857 aa11.91□□□□□ -0.5
DNMT1-215ENST00000588913 TMEM101Q96IK0 257 aa11.9□□□□□ -0.5
DNMT1-215ENST00000588913 PKHD1P08F94 4074 aa11.9□□□□□ -0.51
DNMT1-215ENST00000588913 H7C423 109 aa11.9□□□□□ -0.51
DNMT1-215ENST00000588913 Q8N3U1 123 aa11.9□□□□□ -0.51
DNMT1-215ENST00000588913 CDKN2A-AS1Q9UH64 79 aa11.9□□□□□ -0.51
DNMT1-215ENST00000588913 GAGE2BQ13066 116 aa11.88□□□□□ -0.51
DNMT1-215ENST00000588913 GAGE2EQ4V326 116 aa11.88□□□□□ -0.51
DNMT1-215ENST00000588913 GAGE2DQ9UEU5 116 aa11.88□□□□□ -0.51
DNMT1-215ENST00000588913 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
DNMT1-215ENST00000588913 ACYP1P07311 99 aa11.87□□□□□ -0.51
DNMT1-215ENST00000588913 RNASE13Q5GAN3 156 aaKnown RBP11.87□□□□□ -0.51
DNMT1-215ENST00000588913 LINC00308Q8TCZ7 52 aa11.86□□□□□ -0.51
DNMT1-215ENST00000588913 LINC00242Q5T6M2 205 aa11.85□□□□□ -0.51
DNMT1-215ENST00000588913 ANAPC13Q9BS18 74 aa11.85□□□□□ -0.51
DNMT1-215ENST00000588913 C1orf134Q5TEV5 83 aa11.84□□□□□ -0.51
DNMT1-215ENST00000588913 IGHV3-38A0A0C4DH36 116 aa11.84□□□□□ -0.51
DNMT1-215ENST00000588913 A0A1B0GVY2 172 aa11.84□□□□□ -0.51
DNMT1-215ENST00000588913 TEX49A0A1B0GTD5 131 aa11.83□□□□□ -0.52
DNMT1-215ENST00000588913 COX7A2LO14548 114 aa11.83□□□□□ -0.52
DNMT1-215ENST00000588913 DNAH10OSP0CZ25 163 aa11.83□□□□□ -0.52
DNMT1-215ENST00000588913 LELP1Q5T871 98 aa11.83□□□□□ -0.52
DNMT1-215ENST00000588913 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
DNMT1-215ENST00000588913 SMIM1B2RUZ4 78 aa11.82□□□□□ -0.52
DNMT1-215ENST00000588913 TNP2Q05952 138 aa11.82□□□□□ -0.52
DNMT1-215ENST00000588913 TTC32Q5I0X7 151 aa11.82□□□□□ -0.52
DNMT1-215ENST00000588913 Q6ZRN7 208 aaPredicted RBP11.82□□□□□ -0.52
DNMT1-215ENST00000588913 CDC42SE2Q9NRR3 84 aa11.82□□□□□ -0.52
DNMT1-215ENST00000588913 DNAH5Q8TE73 4624 aa11.81□□□□□ -0.52
DNMT1-215ENST00000588913 UBE2L6O14933 153 aa11.81□□□□□ -0.52
DNMT1-215ENST00000588913 TRACP01848 142 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms