RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
IFT20-216ENST00000588477 FSIP2Q5CZC0 6907 aa8.77□□□□□ -1.01
IFT20-216ENST00000588477 F8VRH5 84 aa8.76□□□□□ -1.01
IFT20-216ENST00000588477 F8W036 122 aa8.76□□□□□ -1.01
IFT20-216ENST00000588477 RPL23P62829 140 aaKnown RBP8.76□□□□□ -1.01
IFT20-216ENST00000588477 MRPL54Q6P161 138 aaKnown RBP8.76□□□□□ -1.01
IFT20-216ENST00000588477 PPBPP02775 128 aa8.75□□□□□ -1.01
IFT20-216ENST00000588477 CTAG1AP78358 180 aa8.74□□□□□ -1.01
IFT20-216ENST00000588477 PNRC1Q12796 327 aaPredicted RBP8.74□□□□□ -1.01
IFT20-216ENST00000588477 ADIRFQ15847 76 aa8.74□□□□□ -1.01
IFT20-216ENST00000588477 TCTE3Q8IZS6 198 aa8.74□□□□□ -1.01
IFT20-216ENST00000588477 AMELXQ99217 191 aa8.74□□□□□ -1.01
IFT20-216ENST00000588477 VCX2Q9H322 139 aa8.74□□□□□ -1.01
IFT20-216ENST00000588477 S100A8P05109 93 aa8.73□□□□□ -1.01
IFT20-216ENST00000588477 TMEM136Q6ZRR5 245 aa8.73□□□□□ -1.01
IFT20-216ENST00000588477 ORMDL3Q8N138 153 aa8.73□□□□□ -1.01
IFT20-216ENST00000588477 PRELID3AQ96N28 172 aa8.73□□□□□ -1.01
IFT20-216ENST00000588477 LOC389332A0A1B0GUA5 103 aa8.72□□□□□ -1.01
IFT20-216ENST00000588477 C2orf66Q6UXQ4 117 aa8.72□□□□□ -1.01
IFT20-216ENST00000588477 FAM19A3Q7Z5A8 133 aa8.72□□□□□ -1.01
IFT20-216ENST00000588477 CDKN2A-AS1Q9UH64 79 aa8.72□□□□□ -1.01
IFT20-216ENST00000588477 CYSLTR1Q9Y271 337 aa8.72□□□□□ -1.01
IFT20-216ENST00000588477 A0A1B0GXF2 115 aa8.71□□□□□ -1.02
IFT20-216ENST00000588477 LINC00337Q8N6G1 96 aa8.71□□□□□ -1.02
IFT20-216ENST00000588477 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.02
IFT20-216ENST00000588477 IGKV2-28A0A075B6P5 120 aa8.7□□□□□ -1.02
IFT20-216ENST00000588477 IGKV2D-28P01615 120 aa8.7□□□□□ -1.02
IFT20-216ENST00000588477 CXCL5P42830 114 aa8.7□□□□□ -1.02
IFT20-216ENST00000588477 HERVK_113P63121 156 aa8.7□□□□□ -1.02
IFT20-216ENST00000588477 PRLHP81277 87 aa8.7□□□□□ -1.02
IFT20-216ENST00000588477 ASB16-AS1Q495Z4 193 aa8.7□□□□□ -1.02
IFT20-216ENST00000588477 C3orf22Q8N5N4 141 aa8.7□□□□□ -1.02
IFT20-216ENST00000588477 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
IFT20-216ENST00000588477 IGLV5-37A0A075B6J1 123 aa8.69□□□□□ -1.02
IFT20-216ENST00000588477 PRSS47A8MTI9 375 aa8.69□□□□□ -1.02
IFT20-216ENST00000588477 SRSF3P84103 164 aaKnown RBP8.69□□□□□ -1.02
IFT20-216ENST00000588477 NAT8Q9UHE5 227 aa8.69□□□□□ -1.02
IFT20-216ENST00000588477 SCO1O75880 301 aa8.68□□□□□ -1.02
IFT20-216ENST00000588477 RAB5BP61020 215 aa8.68□□□□□ -1.02
IFT20-216ENST00000588477 SEC11AP67812 179 aa8.68□□□□□ -1.02
IFT20-216ENST00000588477 GEMIN7Q9H840 131 aaKnown RBP8.68□□□□□ -1.02
IFT20-216ENST00000588477 IGIPA6NJ69 53 aa8.67□□□□□ -1.02
IFT20-216ENST00000588477 FP248Q71RG6 208 aaPredicted RBP8.67□□□□□ -1.02
IFT20-216ENST00000588477 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
IFT20-216ENST00000588477 MAP1LC3AQ9H492 121 aa8.67□□□□□ -1.02
IFT20-216ENST00000588477 NPSP0C0P6 89 aa8.66□□□□□ -1.02
IFT20-216ENST00000588477 KRTAP13-3Q3SY46 172 aa8.66□□□□□ -1.02
IFT20-216ENST00000588477 Q8N8P6 123 aa8.66□□□□□ -1.02
IFT20-216ENST00000588477 SPAG11AQ6PDA7 123 aa8.65□□□□□ -1.02
IFT20-216ENST00000588477 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
IFT20-216ENST00000588477 PLEKHB2Q96CS7 222 aa8.65□□□□□ -1.02
IFT20-216ENST00000588477 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
IFT20-216ENST00000588477 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
IFT20-216ENST00000588477 TMEM126AQ9H061 195 aa8.64□□□□□ -1.03
IFT20-216ENST00000588477 LAMTOR2Q9Y2Q5 125 aa8.64□□□□□ -1.03
IFT20-216ENST00000588477 TMEM238C9JI98 176 aa8.63□□□□□ -1.03
IFT20-216ENST00000588477 C9JQL5 133 aa8.63□□□□□ -1.03
IFT20-216ENST00000588477 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
IFT20-216ENST00000588477 C4orf48Q5BLP8 95 aa8.62□□□□□ -1.03
IFT20-216ENST00000588477 PDZD11Q5EBL8 140 aa8.62□□□□□ -1.03
IFT20-216ENST00000588477 PAPPA-AS1Q5QFB9 102 aa8.62□□□□□ -1.03
IFT20-216ENST00000588477 ATP5L2Q7Z4Y8 100 aa8.62□□□□□ -1.03
IFT20-216ENST00000588477 CBLN2Q8IUK8 224 aa8.62□□□□□ -1.03
IFT20-216ENST00000588477 K7EMI3 77 aa8.59□□□□□ -1.03
IFT20-216ENST00000588477 M0R378 163 aa8.59□□□□□ -1.03
IFT20-216ENST00000588477 TIMM17AQ99595 171 aa8.59□□□□□ -1.03
IFT20-216ENST00000588477 HIGD2AQ9BW72 106 aa8.59□□□□□ -1.03
IFT20-216ENST00000588477 SPINK8P0C7L1 97 aa8.58□□□□□ -1.04
IFT20-216ENST00000588477 VPREB1P12018 145 aa8.58□□□□□ -1.04
IFT20-216ENST00000588477 PFN2P35080 140 aa8.58□□□□□ -1.04
IFT20-216ENST00000588477 DAND5Q8N907 189 aa8.58□□□□□ -1.04
IFT20-216ENST00000588477 GNB1LQ9BYB4 327 aa8.58□□□□□ -1.04
IFT20-216ENST00000588477 TINCRA0A1B0GVN0 87 aa8.57□□□□□ -1.04
IFT20-216ENST00000588477 TOMM6Q96B49 74 aa8.57□□□□□ -1.04
IFT20-216ENST00000588477 G0S2P27469 103 aa8.56□□□□□ -1.04
IFT20-216ENST00000588477 Q8NBF4 154 aa8.56□□□□□ -1.04
IFT20-216ENST00000588477 SPRR4Q96PI1 79 aa8.56□□□□□ -1.04
IFT20-216ENST00000588477 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
IFT20-216ENST00000588477 IGLV5-45A0A087WSX0 123 aa8.55□□□□□ -1.04
IFT20-216ENST00000588477 ATP5LO75964 103 aa8.55□□□□□ -1.04
IFT20-216ENST00000588477 PEA15Q15121 130 aa8.55□□□□□ -1.04
IFT20-216ENST00000588477 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
IFT20-216ENST00000588477 AKAP14Q86UN6 197 aa8.55□□□□□ -1.04
IFT20-216ENST00000588477 RPL24P83731 157 aaKnown RBP8.54□□□□□ -1.04
IFT20-216ENST00000588477 ERASQ7Z444 233 aa8.54□□□□□ -1.04
IFT20-216ENST00000588477 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
IFT20-216ENST00000588477 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
IFT20-216ENST00000588477 ADCYAP1P18509 176 aa8.53□□□□□ -1.04
IFT20-216ENST00000588477 RAB14P61106 215 aa8.53□□□□□ -1.04
IFT20-216ENST00000588477 SPINK1P00995 79 aa8.52□□□□□ -1.05
IFT20-216ENST00000588477 Q8NDZ9 215 aa8.52□□□□□ -1.05
IFT20-216ENST00000588477 ZNF706Q9Y5V0 76 aaPredicted RBP8.51□□□□□ -1.05
IFT20-216ENST00000588477 A0A1B0GVG6 124 aa8.5□□□□□ -1.05
IFT20-216ENST00000588477 CST9LQ9H4G1 147 aa8.5□□□□□ -1.05
IFT20-216ENST00000588477 NDUFA12Q9UI09 145 aa8.5□□□□□ -1.05
IFT20-216ENST00000588477 ERG28Q9UKR5 140 aa8.5□□□□□ -1.05
IFT20-216ENST00000588477 MRPL18Q9H0U6 180 aaKnown RBP8.49□□□□□ -1.05
IFT20-216ENST00000588477 H3BRM9 83 aa8.48□□□□□ -1.05
IFT20-216ENST00000588477 MT1HP80294 61 aa8.48□□□□□ -1.05
IFT20-216ENST00000588477 XP32Q5T750 250 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms