RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 LINC01600Q96MT4 127 aa4.03□□□□□ -1.76
SDF2-206ENST00000587788 TGP01266 2768 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 TRAV13-1A0A0B4J241 112 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 TEX48A0A1B0GUV7 120 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 SMIM1B2RUZ4 78 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 PCP4P48539 62 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 ATXN8Q156A1 80 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 Q1RN00 199 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 LINC01561Q8N1V8 128 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 WFDC10AQ9H1F0 79 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 PRO0255Q9UI72 69 aa4.02□□□□□ -1.77
SDF2-206ENST00000587788 NACAE9PAV3 2078 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 A0A1B0GUV1 79 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 F5H768 121 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 TCL1BO95988 128 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 COX6A2Q02221 97 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 ETDBQ3ZM63 59 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 ADAMTSL4-AS1Q5T5F5 129 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 SH2D6Q7Z4S9 175 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 TEN1Q86WV5 123 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 PPDPFLQ8WWR9 84 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 B9D2Q9BPU9 175 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 CHCHD5Q9BSY4 110 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 Q9H8V8 135 aa4.01□□□□□ -1.77
SDF2-206ENST00000587788 HUWE1Q7Z6Z7 4374 aaKnown RBP4□□□□□ -1.77
SDF2-206ENST00000587788 TRAV26-1A0A087WT03 109 aa4□□□□□ -1.77
SDF2-206ENST00000587788 SPART-AS1P0CW21 52 aa4□□□□□ -1.77
SDF2-206ENST00000587788 DEFB130BP0DP73 79 aa4□□□□□ -1.77
SDF2-206ENST00000587788 DEFB130AP0DP74 79 aa4□□□□□ -1.77
SDF2-206ENST00000587788 SCGB1A1P11684 91 aa4□□□□□ -1.77
SDF2-206ENST00000587788 LINC00308Q8TCZ7 52 aa4□□□□□ -1.77
SDF2-206ENST00000587788 COX7B2Q8TF08 81 aa4□□□□□ -1.77
SDF2-206ENST00000587788 ZNF625Q96I27 306 aaPredicted RBP4□□□□□ -1.77
SDF2-206ENST00000587788 ICOSQ9Y6W8 199 aa4□□□□□ -1.77
SDF2-206ENST00000587788 A0A087WZ39 114 aa3.99□□□□□ -1.77
SDF2-206ENST00000587788 TMEM262E9PQX1 116 aa3.99□□□□□ -1.77
SDF2-206ENST00000587788 GAGE6Q13070 117 aa3.99□□□□□ -1.77
SDF2-206ENST00000587788 SS18Q15532 418 aa3.99□□□□□ -1.77
SDF2-206ENST00000587788 MEIG1Q5JSS6 88 aa3.99□□□□□ -1.77
SDF2-206ENST00000587788 SIGMAR1Q99720 223 aa3.99□□□□□ -1.77
SDF2-206ENST00000587788 TRAV13-2A0A0B4J235 113 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 IGHV3OR16-9A0A0B4J2B5 98 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 TRBV10-2A0A0K0K1G8 114 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 LOC100131303A0A0U1RQF7 123 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 IBA57-AS1B1ANH7 110 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 C9JAW5 83 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 H3BT86 120 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 H7C2G1 150 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 SLC25A20O43772 301 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 ATP5G1P05496 136 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 RPL13AP40429 203 aaKnown RBP3.98□□□□□ -1.77
SDF2-206ENST00000587788 DEFB135Q30KP9 77 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 LINC01620Q4KN68 170 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 FAM222AQ5U5X8 452 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 ANKRD29Q8N6D5 301 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 KRTAP9-3Q9BYQ3 159 aa3.98□□□□□ -1.77
SDF2-206ENST00000587788 IGHV4-28A0A0C4DH34 117 aa3.97□□□□□ -1.77
SDF2-206ENST00000587788 LINC00959A0A1B0GUT2 108 aa3.97□□□□□ -1.77
SDF2-206ENST00000587788 NHLRC4P0CG21 123 aaPredicted RBP3.97□□□□□ -1.77
SDF2-206ENST00000587788 DAD1P61803 113 aa3.97□□□□□ -1.77
SDF2-206ENST00000587788 Q8NAQ8 132 aa3.97□□□□□ -1.77
SDF2-206ENST00000587788 RETNQ9HD89 108 aa3.97□□□□□ -1.77
SDF2-206ENST00000587788 TENM3Q9P273 2699 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 IGLV4-60A0A075B6I1 120 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 LST1O00453 97 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 COX7A2LO14548 114 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 CXCL5P42830 114 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 MRPL23Q16540 153 aaKnown RBP3.96□□□□□ -1.78
SDF2-206ENST00000587788 C6orf226Q5I0X4 101 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 Q8IZM0 81 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 MUC7Q8TAX7 377 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 CARD19Q96LW7 228 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 TM2D3Q9BRN9 247 aa3.96□□□□□ -1.78
SDF2-206ENST00000587788 C11orf68Q9H3H3 251 aaKnown RBP3.96□□□□□ -1.78
SDF2-206ENST00000587788 H3BNG1 76 aa3.95□□□□□ -1.78
SDF2-206ENST00000587788 TRACP01848 142 aa3.95□□□□□ -1.78
SDF2-206ENST00000587788 NPC2P61916 151 aa3.95□□□□□ -1.78
SDF2-206ENST00000587788 COX17Q14061 63 aa3.95□□□□□ -1.78
SDF2-206ENST00000587788 CD164L2Q6UWJ8 174 aa3.95□□□□□ -1.78
SDF2-206ENST00000587788 C2orf82Q6UX34 121 aa3.95□□□□□ -1.78
SDF2-206ENST00000587788 MTURNQ8N3F0 131 aa3.95□□□□□ -1.78
SDF2-206ENST00000587788 H0YGX0 51 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 CRPP02741 224 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 RPL28P46779 137 aaKnown RBP3.94□□□□□ -1.78
SDF2-206ENST00000587788 LINC00158P58513 81 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 LELP1Q5T871 98 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 MIR7-3HGQ8N6C7 128 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 DAND5Q8N907 189 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 C11orf45Q8TAV5 145 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 UBE2WQ96B02 151 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 SND1-IT1Q9HBX3 110 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 TOMM7Q9P0U1 55 aa3.94□□□□□ -1.78
SDF2-206ENST00000587788 IGKV3OR2-268A0A0C4DH90 116 aa3.93□□□□□ -1.78
SDF2-206ENST00000587788 CKS1BP61024 79 aa3.93□□□□□ -1.78
SDF2-206ENST00000587788 CFAP161Q6P656 301 aa3.93□□□□□ -1.78
SDF2-206ENST00000587788 C5orf38Q86SI9 138 aa3.93□□□□□ -1.78
SDF2-206ENST00000587788 A0A0U1RRA0 63 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms