RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 ERASQ7Z444 233 aa11.12□□□□□ -0.63
HMG20B-216ENST00000585900 SCGB3A1Q96QR1 104 aa11.12□□□□□ -0.63
HMG20B-216ENST00000585900 GNB1LQ9BYB4 327 aa11.12□□□□□ -0.63
HMG20B-216ENST00000585900 COX19Q49B96 90 aa11.11□□□□□ -0.63
HMG20B-216ENST00000585900 CDKN2A-AS1Q9UH64 79 aa11.11□□□□□ -0.63
HMG20B-216ENST00000585900 CXCL5P42830 114 aa11.1□□□□□ -0.63
HMG20B-216ENST00000585900 LINC00469Q8N7U9 141 aa11.1□□□□□ -0.63
HMG20B-216ENST00000585900 IFITM2Q01629 132 aa11.09□□□□□ -0.63
HMG20B-216ENST00000585900 C9orf129Q5T035 196 aaKnown RBP11.09□□□□□ -0.63
HMG20B-216ENST00000585900 COMMD7Q86VX2 200 aa11.09□□□□□ -0.63
HMG20B-216ENST00000585900 UBR4Q5T4S7 5183 aa11.09□□□□□ -0.63
HMG20B-216ENST00000585900 F8VRH5 84 aa11.08□□□□□ -0.64
HMG20B-216ENST00000585900 ODF1Q14990 250 aa11.08□□□□□ -0.64
HMG20B-216ENST00000585900 FA2HQ7L5A8 372 aa11.08□□□□□ -0.64
HMG20B-216ENST00000585900 SMCO4Q9NRQ5 59 aa11.08□□□□□ -0.64
HMG20B-216ENST00000585900 H0Y9J4 135 aa11.07□□□□□ -0.64
HMG20B-216ENST00000585900 KRTAP11-1Q8IUC1 163 aa11.07□□□□□ -0.64
HMG20B-216ENST00000585900 KRTAP7-1Q8IUC3 87 aa11.07□□□□□ -0.64
HMG20B-216ENST00000585900 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
HMG20B-216ENST00000585900 LINC01546A6NGU7 62 aa11.05□□□□□ -0.64
HMG20B-216ENST00000585900 FABP9Q0Z7S8 132 aa11.05□□□□□ -0.64
HMG20B-216ENST00000585900 RHEBQ15382 184 aa11.05□□□□□ -0.64
HMG20B-216ENST00000585900 MRPL18Q9H0U6 180 aaKnown RBP11.05□□□□□ -0.64
HMG20B-216ENST00000585900 XAGE1AQ9HD64 81 aa11.05□□□□□ -0.64
HMG20B-216ENST00000585900 SMIM1B2RUZ4 78 aa11.04□□□□□ -0.64
HMG20B-216ENST00000585900 LBHQ53QV2 105 aaPredicted RBP11.04□□□□□ -0.64
HMG20B-216ENST00000585900 PDZD11Q5EBL8 140 aa11.04□□□□□ -0.64
HMG20B-216ENST00000585900 RPS10P5Q9NQ39 176 aa11.04□□□□□ -0.64
HMG20B-216ENST00000585900 COX7B2Q8TF08 81 aa11.03□□□□□ -0.64
HMG20B-216ENST00000585900 IGLV5-45A0A087WSX0 123 aa11.02□□□□□ -0.65
HMG20B-216ENST00000585900 PMVKQ15126 192 aa11.02□□□□□ -0.65
HMG20B-216ENST00000585900 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
HMG20B-216ENST00000585900 PRR26Q8N8Z3 221 aa11.01□□□□□ -0.65
HMG20B-216ENST00000585900 CARHSP1Q9Y2V2 147 aaKnown RBP11.01□□□□□ -0.65
HMG20B-216ENST00000585900 C22orf24Q9Y442 160 aa11.01□□□□□ -0.65
HMG20B-216ENST00000585900 IGLV1-50A0A075B6I6 118 aa11□□□□□ -0.65
HMG20B-216ENST00000585900 H3BRM9 83 aa11□□□□□ -0.65
HMG20B-216ENST00000585900 NUPR1O60356 82 aa11□□□□□ -0.65
HMG20B-216ENST00000585900 C10orf91Q5T1B1 145 aa11□□□□□ -0.65
HMG20B-216ENST00000585900 SPINK8P0C7L1 97 aa10.99□□□□□ -0.65
HMG20B-216ENST00000585900 TP73-AS1Q9UF72 201 aa10.99□□□□□ -0.65
HMG20B-216ENST00000585900 LRP2P98164 4655 aa10.98□□□□□ -0.65
HMG20B-216ENST00000585900 MRPL55Q7Z7F7 128 aaKnown RBP10.98□□□□□ -0.65
HMG20B-216ENST00000585900 ZNF861PO60384 105 aa10.96□□□□□ -0.65
HMG20B-216ENST00000585900 ATP5LO75964 103 aa10.96□□□□□ -0.65
HMG20B-216ENST00000585900 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
HMG20B-216ENST00000585900 NDUFA6P56556 154 aa10.96□□□□□ -0.65
HMG20B-216ENST00000585900 TRAPPC1Q9Y5R8 145 aa10.96□□□□□ -0.65
HMG20B-216ENST00000585900 RAB5BP61020 215 aa10.94□□□□□ -0.66
HMG20B-216ENST00000585900 NDUFA5Q16718 116 aa10.94□□□□□ -0.66
HMG20B-216ENST00000585900 HBDP02042 147 aa10.93□□□□□ -0.66
HMG20B-216ENST00000585900 KRTAP1-4P0C5Y4 121 aa10.93□□□□□ -0.66
HMG20B-216ENST00000585900 LINC00614P0C842 121 aa10.93□□□□□ -0.66
HMG20B-216ENST00000585900 IGLC3P0DOY3 106 aa10.93□□□□□ -0.66
HMG20B-216ENST00000585900 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
HMG20B-216ENST00000585900 C18orf32Q8TCD1 76 aa10.93□□□□□ -0.66
HMG20B-216ENST00000585900 NKAPP1Q8N9T2 125 aa10.92□□□□□ -0.66
HMG20B-216ENST00000585900 BCE1O60756 84 aa10.91□□□□□ -0.66
HMG20B-216ENST00000585900 APOC3P02656 99 aa10.91□□□□□ -0.66
HMG20B-216ENST00000585900 A0A096LNJ9 63 aa10.9□□□□□ -0.66
HMG20B-216ENST00000585900 SNAPINO95295 136 aa10.9□□□□□ -0.66
HMG20B-216ENST00000585900 SVBPQ8N300 66 aa10.9□□□□□ -0.66
HMG20B-216ENST00000585900 LINC00167Q96N53 147 aa10.9□□□□□ -0.66
HMG20B-216ENST00000585900 GAGE10A6NGK3 116 aa10.89□□□□□ -0.67
HMG20B-216ENST00000585900 RPL37AP8A6NKH3 93 aa10.89□□□□□ -0.67
HMG20B-216ENST00000585900 IGLV5-37A0A075B6J1 123 aa10.88□□□□□ -0.67
HMG20B-216ENST00000585900 IGLV5-39A0A0G2JS06 123 aa10.88□□□□□ -0.67
HMG20B-216ENST00000585900 ZNF22P17026 224 aaPredicted RBP10.88□□□□□ -0.67
HMG20B-216ENST00000585900 PFN2P35080 140 aa10.88□□□□□ -0.67
HMG20B-216ENST00000585900 PMCHL1Q16048 86 aa10.88□□□□□ -0.67
HMG20B-216ENST00000585900 URB1-AS1Q96HZ7 61 aa10.88□□□□□ -0.67
HMG20B-216ENST00000585900 SFTA2Q6UW10 78 aa10.86□□□□□ -0.67
HMG20B-216ENST00000585900 BAGE3Q86Y29 109 aa10.86□□□□□ -0.67
HMG20B-216ENST00000585900 UBE2AP49459 152 aa10.85□□□□□ -0.67
HMG20B-216ENST00000585900 TMEM170BQ5T4T1 132 aa10.85□□□□□ -0.67
HMG20B-216ENST00000585900 ERG28Q9UKR5 140 aa10.85□□□□□ -0.67
HMG20B-216ENST00000585900 COX17Q14061 63 aa10.84□□□□□ -0.67
HMG20B-216ENST00000585900 C11orf86A6NJI1 115 aa10.83□□□□□ -0.68
HMG20B-216ENST00000585900 IGKV2-28A0A075B6P5 120 aa10.82□□□□□ -0.68
HMG20B-216ENST00000585900 IGKV2D-28P01615 120 aa10.82□□□□□ -0.68
HMG20B-216ENST00000585900 RPL24P83731 157 aaKnown RBP10.82□□□□□ -0.68
HMG20B-216ENST00000585900 ZNF625Q96I27 306 aaPredicted RBP10.81□□□□□ -0.68
HMG20B-216ENST00000585900 SND1-IT1Q9HBX3 110 aa10.81□□□□□ -0.68
HMG20B-216ENST00000585900 CHTOPQ9Y3Y2 248 aaKnown RBP10.81□□□□□ -0.68
HMG20B-216ENST00000585900 CRYGAP11844 174 aa10.8□□□□□ -0.68
HMG20B-216ENST00000585900 CHCHD1Q96BP2 118 aaKnown RBP10.8□□□□□ -0.68
HMG20B-216ENST00000585900 SCO1O75880 301 aa10.78□□□□□ -0.68
HMG20B-216ENST00000585900 VPREB1P12018 145 aa10.78□□□□□ -0.68
HMG20B-216ENST00000585900 PRR4Q16378 134 aa10.78□□□□□ -0.68
HMG20B-216ENST00000585900 RNF213Q63HN8 5207 aa10.77□□□□□ -0.69
HMG20B-216ENST00000585900 TYMSOSQ8TAI1 123 aa10.77□□□□□ -0.69
HMG20B-216ENST00000585900 IFI27L1Q96BM0 104 aa10.77□□□□□ -0.69
HMG20B-216ENST00000585900 A0A087X002 238 aa10.76□□□□□ -0.69
HMG20B-216ENST00000585900 TRAV12-1A0A0B4J245 112 aa10.76□□□□□ -0.69
HMG20B-216ENST00000585900 KRTAP13-1Q8IUC0 172 aa10.76□□□□□ -0.69
HMG20B-216ENST00000585900 LINC00158P58513 81 aa10.75□□□□□ -0.69
HMG20B-216ENST00000585900 FAM19A1Q7Z5A9 133 aa10.75□□□□□ -0.69
HMG20B-216ENST00000585900 HSBP1O75506 76 aa10.74□□□□□ -0.69
HMG20B-216ENST00000585900 YPEL4Q96NS1 127 aa10.74□□□□□ -0.69
HMG20B-216ENST00000585900 TMEM126AQ9H061 195 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms