RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 LYPD5Q6UWN5 251 aa15.52■□□□□ 0.08
CCDC47-204ENST00000582252 Q8IZM0 81 aa15.52■□□□□ 0.08
CCDC47-204ENST00000582252 B9D2Q9BPU9 175 aa15.52■□□□□ 0.08
CCDC47-204ENST00000582252 TRBV30A0A0K0K1B3 111 aa15.51■□□□□ 0.07
CCDC47-204ENST00000582252 IBA57-AS1B1ANH7 110 aa15.51■□□□□ 0.07
CCDC47-204ENST00000582252 COX7A2LO14548 114 aa15.51■□□□□ 0.07
CCDC47-204ENST00000582252 C6orf226Q5I0X4 101 aa15.51■□□□□ 0.07
CCDC47-204ENST00000582252 Q6ZTC4 211 aa15.51■□□□□ 0.07
CCDC47-204ENST00000582252 CHCHD10Q8WYQ3 142 aaPredicted RBP15.51■□□□□ 0.07
CCDC47-204ENST00000582252 A0A0J9YWU9 116 aa15.5■□□□□ 0.07
CCDC47-204ENST00000582252 PRKDCP78527 4128 aaKnown RBP15.49■□□□□ 0.07
CCDC47-204ENST00000582252 TCL1BO95988 128 aa15.48■□□□□ 0.07
CCDC47-204ENST00000582252 COX6CP09669 75 aa15.48■□□□□ 0.07
CCDC47-204ENST00000582252 C11orf45Q8TAV5 145 aa15.48■□□□□ 0.07
CCDC47-204ENST00000582252 CXCL5P42830 114 aa15.48■□□□□ 0.07
CCDC47-204ENST00000582252 MEGF8Q7Z7M0 2845 aa15.48■□□□□ 0.07
CCDC47-204ENST00000582252 MALP21145 153 aa15.47■□□□□ 0.07
CCDC47-204ENST00000582252 RPL13AP40429 203 aaKnown RBP15.47■□□□□ 0.07
CCDC47-204ENST00000582252 LINC00158P58513 81 aa15.47■□□□□ 0.07
CCDC47-204ENST00000582252 SOSTDC1Q6X4U4 206 aa15.46■□□□□ 0.07
CCDC47-204ENST00000582252 PRO0461Q9UI25 63 aa15.46■□□□□ 0.07
CCDC47-204ENST00000582252 CFAP161Q6P656 301 aa15.46■□□□□ 0.06
CCDC47-204ENST00000582252 Q8N3U1 123 aa15.46■□□□□ 0.06
CCDC47-204ENST00000582252 MIR7-3HGQ8N6C7 128 aa15.46■□□□□ 0.06
CCDC47-204ENST00000582252 STAB2Q8WWQ8 2551 aa15.45■□□□□ 0.06
CCDC47-204ENST00000582252 WFDC2Q14508 124 aa15.45■□□□□ 0.06
CCDC47-204ENST00000582252 PRR34Q9NV39 138 aa15.45■□□□□ 0.06
CCDC47-204ENST00000582252 COL7A1Q02388 2944 aa15.44■□□□□ 0.06
CCDC47-204ENST00000582252 CKS1BP61024 79 aa15.44■□□□□ 0.06
CCDC47-204ENST00000582252 ATXN8Q156A1 80 aa15.44■□□□□ 0.06
CCDC47-204ENST00000582252 IGLV10-54A0A075B6I4 117 aa15.43■□□□□ 0.06
CCDC47-204ENST00000582252 DEFB131BA0A096LNP1 70 aa15.43■□□□□ 0.06
CCDC47-204ENST00000582252 TRIAP1O43715 76 aa15.43■□□□□ 0.06
CCDC47-204ENST00000582252 CRPP02741 224 aa15.43■□□□□ 0.06
CCDC47-204ENST00000582252 NANOS2P60321 138 aaKnown RBP15.43■□□□□ 0.06
CCDC47-204ENST00000582252 KLK12Q9UKR0 248 aa15.43■□□□□ 0.06
CCDC47-204ENST00000582252 FOXI1Q12951 378 aa15.42■□□□□ 0.06
CCDC47-204ENST00000582252 TRAV8-4A0A0B4J246 113 aa15.41■□□□□ 0.06
CCDC47-204ENST00000582252 NHLRC4P0CG21 123 aaPredicted RBP15.41■□□□□ 0.06
CCDC47-204ENST00000582252 TRAV13-2A0A0B4J235 113 aa15.4■□□□□ 0.06
CCDC47-204ENST00000582252 GAGE12HA6NDE8 117 aa15.39■□□□□ 0.05
CCDC47-204ENST00000582252 PFN2P35080 140 aa15.39■□□□□ 0.05
CCDC47-204ENST00000582252 MTURNQ8N3F0 131 aa15.39■□□□□ 0.05
CCDC47-204ENST00000582252 J3QR89 54 aa15.38■□□□□ 0.05
CCDC47-204ENST00000582252 SND1-IT1Q9HBX3 110 aa15.38■□□□□ 0.05
CCDC47-204ENST00000582252 KLK5Q9Y337 293 aaPredicted RBP15.37■□□□□ 0.05
CCDC47-204ENST00000582252 COX17Q14061 63 aa15.37■□□□□ 0.05
CCDC47-204ENST00000582252 KIAA0087Q14695 138 aa15.37■□□□□ 0.05
CCDC47-204ENST00000582252 ETDBQ3ZM63 59 aa15.37■□□□□ 0.05
CCDC47-204ENST00000582252 ENHOQ6UWT2 76 aa15.37■□□□□ 0.05
CCDC47-204ENST00000582252 TRAV10A0A0B4J240 114 aa15.36■□□□□ 0.05
CCDC47-204ENST00000582252 RNF151Q2KHN1 245 aa15.36■□□□□ 0.05
CCDC47-204ENST00000582252 WFDC10BQ8IUB3 73 aa15.35■□□□□ 0.05
CCDC47-204ENST00000582252 M0QXV9 152 aa15.34■□□□□ 0.05
CCDC47-204ENST00000582252 UBE2WQ96B02 151 aa15.34■□□□□ 0.05
CCDC47-204ENST00000582252 SMCPP49901 116 aaPredicted RBP15.34■□□□□ 0.05
CCDC47-204ENST00000582252 CCL18P55774 89 aa15.34■□□□□ 0.05
CCDC47-204ENST00000582252 C2orf82Q6UX34 121 aa15.34■□□□□ 0.05
CCDC47-204ENST00000582252 C15orf53Q8NAA6 179 aa15.34■□□□□ 0.05
CCDC47-204ENST00000582252 ESRGQ1W209 222 aa15.33■□□□□ 0.04
CCDC47-204ENST00000582252 LINC01620Q4KN68 170 aa15.33■□□□□ 0.04
CCDC47-204ENST00000582252 C9JAW5 83 aa15.32■□□□□ 0.04
CCDC47-204ENST00000582252 SLC25A20O43772 301 aa15.32■□□□□ 0.04
CCDC47-204ENST00000582252 SPAG11BQ08648 103 aa15.32■□□□□ 0.04
CCDC47-204ENST00000582252 CBY1Q9Y3M2 126 aa15.32■□□□□ 0.04
CCDC47-204ENST00000582252 MUC7Q8TAX7 377 aa15.31■□□□□ 0.04
CCDC47-204ENST00000582252 VPS25Q9BRG1 176 aa15.31■□□□□ 0.04
CCDC47-204ENST00000582252 LST1O00453 97 aa15.29■□□□□ 0.04
CCDC47-204ENST00000582252 LINC01556Q5JQF7 62 aa15.29■□□□□ 0.04
CCDC47-204ENST00000582252 TEN1Q86WV5 123 aa15.29■□□□□ 0.04
CCDC47-204ENST00000582252 TRBV10-2A0A0K0K1G8 114 aa15.27■□□□□ 0.04
CCDC47-204ENST00000582252 IGKV2-28A0A075B6P5 120 aa15.26■□□□□ 0.03
CCDC47-204ENST00000582252 IGKV2D-28P01615 120 aa15.26■□□□□ 0.03
CCDC47-204ENST00000582252 RPL28P46779 137 aaKnown RBP15.26■□□□□ 0.03
CCDC47-204ENST00000582252 ANKRD29Q8N6D5 301 aa15.26■□□□□ 0.03
CCDC47-204ENST00000582252 CLEC2BQ92478 149 aa15.26■□□□□ 0.03
CCDC47-204ENST00000582252 LINC01600Q96MT4 127 aa15.26■□□□□ 0.03
CCDC47-204ENST00000582252 FBN3Q75N90 2809 aa15.26■□□□□ 0.03
CCDC47-204ENST00000582252 LINC00337Q8N6G1 96 aa15.25■□□□□ 0.03
CCDC47-204ENST00000582252 PPDPFLQ8WWR9 84 aa15.24■□□□□ 0.03
CCDC47-204ENST00000582252 H3BT86 120 aa15.23■□□□□ 0.03
CCDC47-204ENST00000582252 NDUFC2O95298 119 aa15.23■□□□□ 0.03
CCDC47-204ENST00000582252 GVQW2A0A096LPI5 108 aaPredicted RBP15.21■□□□□ 0.03
CCDC47-204ENST00000582252 C1orf43Q9BWL3 253 aa15.21■□□□□ 0.03
CCDC47-204ENST00000582252 DNAH10OSP0CZ25 163 aa15.2■□□□□ 0.02
CCDC47-204ENST00000582252 UNQ6190/PRO20217Q6UXQ8 127 aa15.2■□□□□ 0.02
CCDC47-204ENST00000582252 C6orf223Q8N319 242 aa15.19■□□□□ 0.02
CCDC47-204ENST00000582252 OR13C6PQ8NH95 151 aa15.19■□□□□ 0.02
CCDC47-204ENST00000582252 NTN5Q8WTR8 489 aaPredicted RBP15.19■□□□□ 0.02
CCDC47-204ENST00000582252 ZNF561-AS1K7EIQ3 104 aa15.18■□□□□ 0.02
CCDC47-204ENST00000582252 TRACP01848 142 aa15.17■□□□□ 0.02
CCDC47-204ENST00000582252 KRTAP26-1Q6PEX3 210 aa15.17■□□□□ 0.02
CCDC47-204ENST00000582252 DNAH7Q8WXX0 4024 aa15.17■□□□□ 0.02
CCDC47-204ENST00000582252 C9orf116Q5BN46 136 aaPredicted RBP15.17■□□□□ 0.02
CCDC47-204ENST00000582252 SMIM11BQ8TCY0 68 aa15.17■□□□□ 0.02
CCDC47-204ENST00000582252 CARD19Q96LW7 228 aa15.17■□□□□ 0.02
CCDC47-204ENST00000582252 H0YGX0 51 aa15.16■□□□□ 0.02
CCDC47-204ENST00000582252 C10orf25Q5T742 122 aa15.16■□□□□ 0.02
CCDC47-204ENST00000582252 DYNC2H1Q8NCM8 4307 aaKnown RBP15.15■□□□□ 0.02
CCDC47-204ENST00000582252 F8WDY8 70 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms